MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Haloarcula marismortui ATCC 43049 plasmid pNG300

Total Repeats: 110

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_006391	GCG	2	6	20	25	0 %	0 %	66.67 %	33.33 %	Non-Coding
2	NC_006391	GAA	2	6	66	71	66.67 %	0 %	33.33 %	0 %	Non-Coding
3	NC_006391	CAG	2	6	4170	4175	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_006391	GGT	3	9	4233	4241	0 %	33.33 %	66.67 %	0 %	Non-Coding
5	NC_006391	ACG	3	9	4247	4255	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_006391	GTC	2	6	4321	4326	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7	NC_006391	GTC	2	6	5128	5133	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8	NC_006391	CGG	2	6	5154	5159	0 %	0 %	66.67 %	33.33 %	Non-Coding
9	NC_006391	TGG	2	6	5170	5175	0 %	33.33 %	66.67 %	0 %	Non-Coding
10	NC_006391	CGA	2	6	6253	6258	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
11	NC_006391	TGT	2	6	6291	6296	0 %	66.67 %	33.33 %	0 %	Non-Coding
12	NC_006391	CAC	2	6	6374	6379	33.33 %	0 %	0 %	66.67 %	Non-Coding
13	NC_006391	CCT	2	6	6425	6430	0 %	33.33 %	0 %	66.67 %	Non-Coding
14	NC_006391	TGG	2	6	6440	6445	0 %	33.33 %	66.67 %	0 %	Non-Coding
15	NC_006391	GTC	2	6	6457	6462	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_006391	CGA	2	6	6511	6516	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_006391	CGG	2	6	6547	6552	0 %	0 %	66.67 %	33.33 %	Non-Coding
18	NC_006391	CAA	2	6	6727	6732	66.67 %	0 %	0 %	33.33 %	Non-Coding
19	NC_006391	TGT	2	6	6799	6804	0 %	66.67 %	33.33 %	0 %	Non-Coding
20	NC_006391	ATT	2	6	6806	6811	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_006391	TTG	2	6	6992	6997	0 %	66.67 %	33.33 %	0 %	Non-Coding
22	NC_006391	GAT	2	6	7024	7029	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
23	NC_006391	TGT	2	6	7074	7079	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_006391	GAT	2	6	7105	7110	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
25	NC_006391	AGT	2	6	7564	7569	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_006391	TCG	2	6	7574	7579	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_006391	TCA	2	6	7616	7621	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_006391	ACT	2	6	7622	7627	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_006391	CCT	2	6	7725	7730	0 %	33.33 %	0 %	66.67 %	Non-Coding
30	NC_006391	CGA	2	6	7775	7780	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
31	NC_006391	CAC	2	6	7803	7808	33.33 %	0 %	0 %	66.67 %	Non-Coding
32	NC_006391	ACC	2	6	10138	10143	33.33 %	0 %	0 %	66.67 %	Non-Coding
33	NC_006391	GTT	2	6	10180	10185	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_006391	ACG	2	6	10199	10204	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_006391	CCT	2	6	10973	10978	0 %	33.33 %	0 %	66.67 %	Non-Coding
36	NC_006391	CAG	2	6	11001	11006	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
37	NC_006391	ACC	2	6	11010	11015	33.33 %	0 %	0 %	66.67 %	Non-Coding
38	NC_006391	CGT	2	6	11022	11027	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
39	NC_006391	ACG	2	6	13508	13513	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40	NC_006391	GCG	2	6	13724	13729	0 %	0 %	66.67 %	33.33 %	Non-Coding
41	NC_006391	AGA	2	6	16306	16311	66.67 %	0 %	33.33 %	0 %	Non-Coding
42	NC_006391	GTC	2	6	16494	16499	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
43	NC_006391	CGT	2	6	16515	16520	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
44	NC_006391	CGC	2	6	16543	16548	0 %	0 %	33.33 %	66.67 %	Non-Coding
45	NC_006391	AGG	2	6	16648	16653	33.33 %	0 %	66.67 %	0 %	Non-Coding
46	NC_006391	CGA	2	6	20180	20185	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
47	NC_006391	AGG	2	6	20194	20199	33.33 %	0 %	66.67 %	0 %	Non-Coding
48	NC_006391	GTG	2	6	20304	20309	0 %	33.33 %	66.67 %	0 %	Non-Coding
49	NC_006391	CGG	2	6	20313	20318	0 %	0 %	66.67 %	33.33 %	Non-Coding
50	NC_006391	CGA	2	6	20383	20388	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51	NC_006391	CAT	2	6	20392	20397	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
52	NC_006391	TCA	2	6	20513	20518	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53	NC_006391	TTG	2	6	20528	20533	0 %	66.67 %	33.33 %	0 %	Non-Coding
54	NC_006391	GAC	3	9	20704	20712	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NC_006391	CGC	2	6	20771	20776	0 %	0 %	33.33 %	66.67 %	Non-Coding
56	NC_006391	TTG	2	6	20917	20922	0 %	66.67 %	33.33 %	0 %	Non-Coding
57	NC_006391	GTT	2	6	21097	21102	0 %	66.67 %	33.33 %	0 %	Non-Coding
58	NC_006391	AGG	2	6	21294	21299	33.33 %	0 %	66.67 %	0 %	Non-Coding
59	NC_006391	GCC	2	6	21314	21319	0 %	0 %	33.33 %	66.67 %	Non-Coding
60	NC_006391	CAG	2	6	21698	21703	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
61	NC_006391	ACA	2	6	21767	21772	66.67 %	0 %	0 %	33.33 %	Non-Coding
62	NC_006391	ATG	2	6	22154	22159	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_006391	GAC	2	6	22215	22220	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
64	NC_006391	TGC	2	6	22288	22293	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
65	NC_006391	CAG	2	6	22555	22560	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
66	NC_006391	TTA	2	6	22762	22767	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_006391	GCG	2	6	22807	22812	0 %	0 %	66.67 %	33.33 %	Non-Coding
68	NC_006391	ACG	2	6	22929	22934	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
69	NC_006391	TCG	2	6	23250	23255	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
70	NC_006391	GTG	2	6	23300	23305	0 %	33.33 %	66.67 %	0 %	Non-Coding
71	NC_006391	GGC	2	6	23368	23373	0 %	0 %	66.67 %	33.33 %	Non-Coding
72	NC_006391	CGG	2	6	23395	23400	0 %	0 %	66.67 %	33.33 %	Non-Coding
73	NC_006391	GGC	2	6	23444	23449	0 %	0 %	66.67 %	33.33 %	Non-Coding
74	NC_006391	ATG	2	6	23570	23575	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
75	NC_006391	CGG	2	6	23641	23646	0 %	0 %	66.67 %	33.33 %	Non-Coding
76	NC_006391	CGT	2	6	23659	23664	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
77	NC_006391	ACG	2	6	23672	23677	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
78	NC_006391	TCG	2	6	23736	23741	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
79	NC_006391	GGT	2	6	23781	23786	0 %	33.33 %	66.67 %	0 %	Non-Coding
80	NC_006391	TCC	2	6	24964	24969	0 %	33.33 %	0 %	66.67 %	Non-Coding
81	NC_006391	CAG	2	6	26533	26538	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
82	NC_006391	CTC	2	6	26591	26596	0 %	33.33 %	0 %	66.67 %	Non-Coding
83	NC_006391	GCT	2	6	26802	26807	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
84	NC_006391	CGT	2	6	26832	26837	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
85	NC_006391	GCG	2	6	26872	26877	0 %	0 %	66.67 %	33.33 %	Non-Coding
86	NC_006391	TGG	2	6	26891	26896	0 %	33.33 %	66.67 %	0 %	Non-Coding
87	NC_006391	TTA	2	6	26900	26905	33.33 %	66.67 %	0 %	0 %	Non-Coding
88	NC_006391	CCG	2	6	27015	27020	0 %	0 %	33.33 %	66.67 %	Non-Coding
89	NC_006391	AAC	2	6	27079	27084	66.67 %	0 %	0 %	33.33 %	Non-Coding
90	NC_006391	ACA	2	6	27089	27094	66.67 %	0 %	0 %	33.33 %	Non-Coding
91	NC_006391	TCG	2	6	28908	28913	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
92	NC_006391	ACC	2	6	28918	28923	33.33 %	0 %	0 %	66.67 %	Non-Coding
93	NC_006391	ATC	2	6	29361	29366	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
94	NC_006391	CGG	3	9	29381	29389	0 %	0 %	66.67 %	33.33 %	Non-Coding
95	NC_006391	TGG	2	6	30980	30985	0 %	33.33 %	66.67 %	0 %	Non-Coding
96	NC_006391	GTC	2	6	31009	31014	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
97	NC_006391	GCT	2	6	31047	31052	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
98	NC_006391	CGC	2	6	31065	31070	0 %	0 %	33.33 %	66.67 %	Non-Coding
99	NC_006391	AGG	2	6	31244	31249	33.33 %	0 %	66.67 %	0 %	Non-Coding
100	NC_006391	CGA	2	6	31257	31262	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
101	NC_006391	GGC	2	6	31758	31763	0 %	0 %	66.67 %	33.33 %	Non-Coding
102	NC_006391	GGT	3	9	31764	31772	0 %	33.33 %	66.67 %	0 %	Non-Coding
103	NC_006391	CTG	2	6	31848	31853	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
104	NC_006391	CGT	2	6	31868	31873	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
105	NC_006391	ACG	2	6	32991	32996	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
106	NC_006391	GCC	2	6	33074	33079	0 %	0 %	33.33 %	66.67 %	Non-Coding
107	NC_006391	CGC	2	6	33082	33087	0 %	0 %	33.33 %	66.67 %	Non-Coding
108	NC_006391	GTC	2	6	33101	33106	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
109	NC_006391	TCG	2	6	33108	33113	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
110	NC_006391	CGC	2	6	39487	39492	0 %	0 %	33.33 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.