MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Haloarcula marismortui ATCC 43049 plasmid pNG200

Total Repeats: 86

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_006390	CAC	2	6	31	36	33.33 %	0 %	0 %	66.67 %	Non-Coding
2	NC_006390	TCG	2	6	42	47	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3	NC_006390	CGC	2	6	70	75	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_006390	GTA	3	9	758	766	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NC_006390	CGG	2	6	780	785	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_006390	TGA	2	6	903	908	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7	NC_006390	GCT	2	6	963	968	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8	NC_006390	CGT	2	6	1032	1037	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_006390	CAG	2	6	1058	1063	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
10	NC_006390	CGG	2	6	1584	1589	0 %	0 %	66.67 %	33.33 %	Non-Coding
11	NC_006390	CTG	2	6	2363	2368	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_006390	GTA	2	6	3082	3087	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_006390	TAA	2	6	3103	3108	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_006390	TGC	2	6	3195	3200	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
15	NC_006390	TAC	2	6	3550	3555	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
16	NC_006390	TCA	2	6	3558	3563	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_006390	AGA	2	6	3592	3597	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_006390	TAG	2	6	5755	5760	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_006390	AAC	2	6	5830	5835	66.67 %	0 %	0 %	33.33 %	Non-Coding
20	NC_006390	CCA	2	6	7025	7030	33.33 %	0 %	0 %	66.67 %	Non-Coding
21	NC_006390	TGA	2	6	7051	7056	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_006390	CTT	2	6	7132	7137	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NC_006390	TAC	2	6	9118	9123	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24	NC_006390	CTT	2	6	9303	9308	0 %	66.67 %	0 %	33.33 %	Non-Coding
25	NC_006390	CCG	2	6	9327	9332	0 %	0 %	33.33 %	66.67 %	Non-Coding
26	NC_006390	CTG	2	6	9454	9459	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_006390	GGC	2	6	10132	10137	0 %	0 %	66.67 %	33.33 %	Non-Coding
28	NC_006390	CTG	2	6	10193	10198	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
29	NC_006390	CAG	2	6	10257	10262	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
30	NC_006390	AAG	2	6	10554	10559	66.67 %	0 %	33.33 %	0 %	Non-Coding
31	NC_006390	ATC	2	6	10585	10590	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_006390	ATA	2	6	10614	10619	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_006390	TTG	2	6	10725	10730	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_006390	AAT	2	6	11745	11750	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_006390	GGA	2	6	11759	11764	33.33 %	0 %	66.67 %	0 %	Non-Coding
36	NC_006390	TCT	2	6	11780	11785	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_006390	ATA	2	6	11795	11800	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_006390	AGT	2	6	11840	11845	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_006390	CTG	2	6	11863	11868	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40	NC_006390	TCA	2	6	13063	13068	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
41	NC_006390	CCA	2	6	13708	13713	33.33 %	0 %	0 %	66.67 %	Non-Coding
42	NC_006390	AAC	2	6	17650	17655	66.67 %	0 %	0 %	33.33 %	Non-Coding
43	NC_006390	GAC	2	6	17691	17696	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
44	NC_006390	TCT	2	6	17733	17738	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_006390	ACT	2	6	20607	20612	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_006390	CGC	2	6	20628	20633	0 %	0 %	33.33 %	66.67 %	Non-Coding
47	NC_006390	CGG	2	6	21085	21090	0 %	0 %	66.67 %	33.33 %	Non-Coding
48	NC_006390	GCC	2	6	21091	21096	0 %	0 %	33.33 %	66.67 %	Non-Coding
49	NC_006390	CCG	2	6	21122	21127	0 %	0 %	33.33 %	66.67 %	Non-Coding
50	NC_006390	GAC	2	6	21135	21140	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51	NC_006390	GCC	2	6	21141	21146	0 %	0 %	33.33 %	66.67 %	Non-Coding
52	NC_006390	ACG	2	6	21161	21166	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53	NC_006390	CCG	2	6	21208	21213	0 %	0 %	33.33 %	66.67 %	Non-Coding
54	NC_006390	CGT	2	6	21285	21290	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
55	NC_006390	GGT	2	6	21482	21487	0 %	33.33 %	66.67 %	0 %	Non-Coding
56	NC_006390	CGA	2	6	21490	21495	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
57	NC_006390	CAA	2	6	21710	21715	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_006390	GCA	2	6	22415	22420	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
59	NC_006390	CAG	2	6	22538	22543	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_006390	GTG	2	6	23209	23214	0 %	33.33 %	66.67 %	0 %	Non-Coding
61	NC_006390	AGT	2	6	26247	26252	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
62	NC_006390	CGG	2	6	26345	26350	0 %	0 %	66.67 %	33.33 %	Non-Coding
63	NC_006390	GGC	2	6	27355	27360	0 %	0 %	66.67 %	33.33 %	Non-Coding
64	NC_006390	CGA	2	6	27575	27580	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
65	NC_006390	ACC	2	6	27588	27593	33.33 %	0 %	0 %	66.67 %	Non-Coding
66	NC_006390	CTG	2	6	27694	27699	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
67	NC_006390	AGA	2	6	27720	27725	66.67 %	0 %	33.33 %	0 %	Non-Coding
68	NC_006390	GGT	2	6	27812	27817	0 %	33.33 %	66.67 %	0 %	Non-Coding
69	NC_006390	CTC	2	6	27938	27943	0 %	33.33 %	0 %	66.67 %	Non-Coding
70	NC_006390	AAG	2	6	27970	27975	66.67 %	0 %	33.33 %	0 %	Non-Coding
71	NC_006390	AAT	2	6	29129	29134	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_006390	CTG	2	6	29519	29524	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
73	NC_006390	GCC	2	6	29533	29538	0 %	0 %	33.33 %	66.67 %	Non-Coding
74	NC_006390	GGC	2	6	29544	29549	0 %	0 %	66.67 %	33.33 %	Non-Coding
75	NC_006390	GAG	2	6	30492	30497	33.33 %	0 %	66.67 %	0 %	Non-Coding
76	NC_006390	ATA	2	6	30506	30511	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_006390	CCA	2	6	30690	30695	33.33 %	0 %	0 %	66.67 %	Non-Coding
78	NC_006390	CGG	2	6	30717	30722	0 %	0 %	66.67 %	33.33 %	Non-Coding
79	NC_006390	CAA	2	6	30742	30747	66.67 %	0 %	0 %	33.33 %	Non-Coding
80	NC_006390	CCG	2	6	31285	31290	0 %	0 %	33.33 %	66.67 %	Non-Coding
81	NC_006390	AAC	2	6	31338	31343	66.67 %	0 %	0 %	33.33 %	Non-Coding
82	NC_006390	CAG	2	6	31401	31406	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
83	NC_006390	CCA	2	6	31407	31412	33.33 %	0 %	0 %	66.67 %	Non-Coding
84	NC_006390	CCA	2	6	31713	31718	33.33 %	0 %	0 %	66.67 %	Non-Coding
85	NC_006390	GTT	2	6	33283	33288	0 %	66.67 %	33.33 %	0 %	Non-Coding
86	NC_006390	TCG	2	6	33390	33395	0 %	33.33 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.