MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Haloarcula marismortui ATCC 43049 plasmid pNG100

Total Repeats: 140

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_006389	GCC	2	6	35	40	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_006389	CAA	2	6	109	114	66.67 %	0 %	0 %	33.33 %	Non-Coding
3	NC_006389	GGA	2	6	1531	1536	33.33 %	0 %	66.67 %	0 %	Non-Coding
4	NC_006389	CGT	2	6	1540	1545	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_006389	CGT	2	6	1630	1635	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6	NC_006389	CGA	2	6	1726	1731	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_006389	CGA	2	6	1751	1756	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8	NC_006389	CAA	2	6	1879	1884	66.67 %	0 %	0 %	33.33 %	Non-Coding
9	NC_006389	TCG	2	6	1887	1892	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
10	NC_006389	CTT	2	6	2268	2273	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_006389	CTT	2	6	2344	2349	0 %	66.67 %	0 %	33.33 %	Non-Coding
12	NC_006389	GGA	2	6	2373	2378	33.33 %	0 %	66.67 %	0 %	Non-Coding
13	NC_006389	CTG	2	6	2503	2508	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_006389	CTT	2	6	2514	2519	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_006389	GTC	2	6	2626	2631	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_006389	GCT	2	6	2649	2654	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_006389	TCA	2	6	2660	2665	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_006389	CCG	2	6	2857	2862	0 %	0 %	33.33 %	66.67 %	Non-Coding
19	NC_006389	GTC	2	6	2893	2898	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_006389	TCC	2	6	2990	2995	0 %	33.33 %	0 %	66.67 %	Non-Coding
21	NC_006389	GTA	2	6	3188	3193	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_006389	AGT	2	6	3234	3239	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
23	NC_006389	TGG	2	6	3272	3277	0 %	33.33 %	66.67 %	0 %	Non-Coding
24	NC_006389	GGC	2	6	3366	3371	0 %	0 %	66.67 %	33.33 %	Non-Coding
25	NC_006389	GTC	2	6	3374	3379	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
26	NC_006389	CCT	2	6	3385	3390	0 %	33.33 %	0 %	66.67 %	Non-Coding
27	NC_006389	CAG	2	6	3428	3433	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
28	NC_006389	GAA	2	6	3595	3600	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_006389	GTC	2	6	3605	3610	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_006389	AAT	2	6	3735	3740	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_006389	TCA	2	6	4062	4067	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_006389	AAT	2	6	4873	4878	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_006389	GAT	2	6	5072	5077	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
34	NC_006389	CTG	2	6	5689	5694	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
35	NC_006389	CGG	2	6	5748	5753	0 %	0 %	66.67 %	33.33 %	Non-Coding
36	NC_006389	TGC	2	6	5757	5762	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_006389	AGT	2	6	5798	5803	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
38	NC_006389	AGC	2	6	5839	5844	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
39	NC_006389	TTG	2	6	5874	5879	0 %	66.67 %	33.33 %	0 %	Non-Coding
40	NC_006389	TAA	2	6	5892	5897	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_006389	GAT	2	6	5970	5975	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
42	NC_006389	GGC	2	6	5984	5989	0 %	0 %	66.67 %	33.33 %	Non-Coding
43	NC_006389	GAA	2	6	6402	6407	66.67 %	0 %	33.33 %	0 %	Non-Coding
44	NC_006389	GTT	2	6	6424	6429	0 %	66.67 %	33.33 %	0 %	Non-Coding
45	NC_006389	CGC	2	6	6509	6514	0 %	0 %	33.33 %	66.67 %	Non-Coding
46	NC_006389	ACG	2	6	6603	6608	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
47	NC_006389	GCC	2	6	6612	6617	0 %	0 %	33.33 %	66.67 %	Non-Coding
48	NC_006389	CGT	2	6	6674	6679	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
49	NC_006389	CAG	2	6	6758	6763	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_006389	CCG	2	6	6772	6777	0 %	0 %	33.33 %	66.67 %	Non-Coding
51	NC_006389	GTC	2	6	6935	6940	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
52	NC_006389	GAC	2	6	6978	6983	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53	NC_006389	AAT	2	6	6985	6990	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_006389	CAG	2	6	7401	7406	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NC_006389	CAC	2	6	7468	7473	33.33 %	0 %	0 %	66.67 %	Non-Coding
56	NC_006389	ATT	2	6	8582	8587	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_006389	TGC	2	6	8646	8651	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
58	NC_006389	CAA	2	6	8718	8723	66.67 %	0 %	0 %	33.33 %	Non-Coding
59	NC_006389	TAC	2	6	8726	8731	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_006389	CGG	2	6	8867	8872	0 %	0 %	66.67 %	33.33 %	Non-Coding
61	NC_006389	CTT	2	6	8949	8954	0 %	66.67 %	0 %	33.33 %	Non-Coding
62	NC_006389	CGA	2	6	8963	8968	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
63	NC_006389	CGA	2	6	8975	8980	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
64	NC_006389	CGA	2	6	9105	9110	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
65	NC_006389	CCG	2	6	9518	9523	0 %	0 %	33.33 %	66.67 %	Non-Coding
66	NC_006389	CTT	2	6	9655	9660	0 %	66.67 %	0 %	33.33 %	Non-Coding
67	NC_006389	TCG	2	6	9810	9815	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
68	NC_006389	TTC	2	6	9940	9945	0 %	66.67 %	0 %	33.33 %	Non-Coding
69	NC_006389	TTA	2	6	10025	10030	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_006389	CAG	2	6	10086	10091	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
71	NC_006389	TAT	2	6	10106	10111	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_006389	ATA	2	6	10212	10217	66.67 %	33.33 %	0 %	0 %	Non-Coding
73	NC_006389	AAG	2	6	10242	10247	66.67 %	0 %	33.33 %	0 %	Non-Coding
74	NC_006389	ACC	2	6	11053	11058	33.33 %	0 %	0 %	66.67 %	Non-Coding
75	NC_006389	ACC	2	6	11572	11577	33.33 %	0 %	0 %	66.67 %	Non-Coding
76	NC_006389	CCG	2	6	11578	11583	0 %	0 %	33.33 %	66.67 %	Non-Coding
77	NC_006389	CCA	2	6	11648	11653	33.33 %	0 %	0 %	66.67 %	Non-Coding
78	NC_006389	CAG	2	6	11655	11660	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
79	NC_006389	CCA	2	6	12452	12457	33.33 %	0 %	0 %	66.67 %	Non-Coding
80	NC_006389	GTT	2	6	14022	14027	0 %	66.67 %	33.33 %	0 %	Non-Coding
81	NC_006389	GGT	2	6	14039	14044	0 %	33.33 %	66.67 %	0 %	Non-Coding
82	NC_006389	TCG	2	6	14129	14134	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
83	NC_006389	CAC	2	6	14222	14227	33.33 %	0 %	0 %	66.67 %	Non-Coding
84	NC_006389	TCG	2	6	14233	14238	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
85	NC_006389	GCC	2	6	14262	14267	0 %	0 %	33.33 %	66.67 %	Non-Coding
86	NC_006389	TCT	2	6	14432	14437	0 %	66.67 %	0 %	33.33 %	Non-Coding
87	NC_006389	CGG	2	6	14971	14976	0 %	0 %	66.67 %	33.33 %	Non-Coding
88	NC_006389	TTC	2	6	15260	15265	0 %	66.67 %	0 %	33.33 %	Non-Coding
89	NC_006389	ACA	2	6	15371	15376	66.67 %	0 %	0 %	33.33 %	Non-Coding
90	NC_006389	TAG	2	6	15391	15396	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
91	NC_006389	CAC	2	6	15524	15529	33.33 %	0 %	0 %	66.67 %	Non-Coding
92	NC_006389	CGA	2	6	15851	15856	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
93	NC_006389	ACA	2	6	15983	15988	66.67 %	0 %	0 %	33.33 %	Non-Coding
94	NC_006389	TGA	2	6	16044	16049	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
95	NC_006389	GTT	2	6	16074	16079	0 %	66.67 %	33.33 %	0 %	Non-Coding
96	NC_006389	ACT	2	6	16117	16122	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
97	NC_006389	CTG	2	6	17225	17230	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
98	NC_006389	TAA	2	6	17236	17241	66.67 %	33.33 %	0 %	0 %	Non-Coding
99	NC_006389	CTA	2	6	17442	17447	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
100	NC_006389	CGC	2	6	18865	18870	0 %	0 %	33.33 %	66.67 %	Non-Coding
101	NC_006389	TGT	2	6	18942	18947	0 %	66.67 %	33.33 %	0 %	Non-Coding
102	NC_006389	GTA	2	6	19191	19196	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
103	NC_006389	GAT	2	6	19224	19229	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
104	NC_006389	AAG	2	6	19308	19313	66.67 %	0 %	33.33 %	0 %	Non-Coding
105	NC_006389	AGA	2	6	19316	19321	66.67 %	0 %	33.33 %	0 %	Non-Coding
106	NC_006389	CTA	2	6	19434	19439	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
107	NC_006389	TCC	2	6	19466	19471	0 %	33.33 %	0 %	66.67 %	Non-Coding
108	NC_006389	GCT	2	6	19577	19582	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
109	NC_006389	TGT	2	6	19654	19659	0 %	66.67 %	33.33 %	0 %	Non-Coding
110	NC_006389	CCG	2	6	20939	20944	0 %	0 %	33.33 %	66.67 %	Non-Coding
111	NC_006389	TAG	2	6	21008	21013	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
112	NC_006389	TAG	2	6	21855	21860	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
113	NC_006389	GTG	2	6	21894	21899	0 %	33.33 %	66.67 %	0 %	Non-Coding
114	NC_006389	AGC	2	6	21925	21930	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
115	NC_006389	TTC	2	6	21999	22004	0 %	66.67 %	0 %	33.33 %	Non-Coding
116	NC_006389	TGT	2	6	23480	23485	0 %	66.67 %	33.33 %	0 %	Non-Coding
117	NC_006389	GTT	2	6	23490	23495	0 %	66.67 %	33.33 %	0 %	Non-Coding
118	NC_006389	CTG	2	6	23613	23618	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
119	NC_006389	AGT	2	6	23642	23647	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
120	NC_006389	CTT	2	6	24982	24987	0 %	66.67 %	0 %	33.33 %	Non-Coding
121	NC_006389	GCC	2	6	25076	25081	0 %	0 %	33.33 %	66.67 %	Non-Coding
122	NC_006389	TCC	2	6	25118	25123	0 %	33.33 %	0 %	66.67 %	Non-Coding
123	NC_006389	CGG	2	6	25252	25257	0 %	0 %	66.67 %	33.33 %	Non-Coding
124	NC_006389	CTG	3	9	25277	25285	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
125	NC_006389	GAA	2	6	25314	25319	66.67 %	0 %	33.33 %	0 %	Non-Coding
126	NC_006389	TCT	2	6	25418	25423	0 %	66.67 %	0 %	33.33 %	Non-Coding
127	NC_006389	GCG	2	6	25444	25449	0 %	0 %	66.67 %	33.33 %	Non-Coding
128	NC_006389	GAC	2	6	29502	29507	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
129	NC_006389	ACG	2	6	29555	29560	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
130	NC_006389	AGT	2	6	29631	29636	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
131	NC_006389	GGC	2	6	29733	29738	0 %	0 %	66.67 %	33.33 %	Non-Coding
132	NC_006389	TAA	2	6	29752	29757	66.67 %	33.33 %	0 %	0 %	Non-Coding
133	NC_006389	GGT	2	6	29778	29783	0 %	33.33 %	66.67 %	0 %	Non-Coding
134	NC_006389	TGG	2	6	29802	29807	0 %	33.33 %	66.67 %	0 %	Non-Coding
135	NC_006389	GTG	2	6	29840	29845	0 %	33.33 %	66.67 %	0 %	Non-Coding
136	NC_006389	TAG	2	6	30010	30015	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
137	NC_006389	CTC	2	6	32771	32776	0 %	33.33 %	0 %	66.67 %	Non-Coding
138	NC_006389	TCA	2	6	32777	32782	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
139	NC_006389	GTT	2	6	32860	32865	0 %	66.67 %	33.33 %	0 %	Non-Coding
140	NC_006389	ACG	2	6	33049	33054	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.