Hexa-nucleotide Coding Repeats of Nocardia farcinica IFM 10152 plasmid pNF2
Total Repeats: 64
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_006363 | GCCGCG | 2 | 12 | 1926 | 1937 | 0 % | 0 % | 50 % | 50 % | 54027812 |
2 | NC_006363 | GTCCAG | 2 | 12 | 3324 | 3335 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 54027812 |
3 | NC_006363 | CCATTC | 2 | 12 | 4622 | 4633 | 16.67 % | 33.33 % | 0 % | 50 % | 54027814 |
4 | NC_006363 | CGGGAT | 2 | 12 | 6884 | 6895 | 16.67 % | 16.67 % | 50 % | 16.67 % | 54027820 |
5 | NC_006363 | CGCTCG | 2 | 12 | 7250 | 7261 | 0 % | 16.67 % | 33.33 % | 50 % | 54027821 |
6 | NC_006363 | CGGGTT | 2 | 12 | 8106 | 8117 | 0 % | 33.33 % | 50 % | 16.67 % | 54027821 |
7 | NC_006363 | ACCTCG | 2 | 12 | 8734 | 8745 | 16.67 % | 16.67 % | 16.67 % | 50 % | 54027821 |
8 | NC_006363 | GTTCGA | 2 | 12 | 9008 | 9019 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 54027822 |
9 | NC_006363 | GCGGGT | 2 | 12 | 10630 | 10641 | 0 % | 16.67 % | 66.67 % | 16.67 % | 54027823 |
10 | NC_006363 | CCGGCA | 2 | 12 | 12711 | 12722 | 16.67 % | 0 % | 33.33 % | 50 % | 54027823 |
11 | NC_006363 | GCGGGC | 2 | 12 | 13231 | 13242 | 0 % | 0 % | 66.67 % | 33.33 % | 54027824 |
12 | NC_006363 | GGCCGA | 2 | 12 | 13379 | 13390 | 16.67 % | 0 % | 50 % | 33.33 % | 54027824 |
13 | NC_006363 | CACCGC | 2 | 12 | 14909 | 14920 | 16.67 % | 0 % | 16.67 % | 66.67 % | 54027824 |
14 | NC_006363 | CCGAGA | 2 | 12 | 17074 | 17085 | 33.33 % | 0 % | 33.33 % | 33.33 % | 54027828 |
15 | NC_006363 | CGCCAA | 2 | 12 | 18463 | 18474 | 33.33 % | 0 % | 16.67 % | 50 % | 54027830 |
16 | NC_006363 | CGCAAG | 2 | 12 | 18614 | 18625 | 33.33 % | 0 % | 33.33 % | 33.33 % | 54027830 |
17 | NC_006363 | GACATC | 2 | 12 | 19127 | 19138 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 54027830 |
18 | NC_006363 | TGAGCA | 2 | 12 | 20133 | 20144 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 54027831 |
19 | NC_006363 | GGTGCC | 2 | 12 | 21523 | 21534 | 0 % | 16.67 % | 50 % | 33.33 % | 54027831 |
20 | NC_006363 | GGCCTG | 2 | 12 | 23791 | 23802 | 0 % | 16.67 % | 50 % | 33.33 % | 54027831 |
21 | NC_006363 | GTCGAA | 2 | 12 | 24640 | 24651 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 54027833 |
22 | NC_006363 | CGATCG | 2 | 12 | 25184 | 25195 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 54027834 |
23 | NC_006363 | TCGCCA | 2 | 12 | 25943 | 25954 | 16.67 % | 16.67 % | 16.67 % | 50 % | 54027834 |
24 | NC_006363 | CGACCT | 2 | 12 | 27115 | 27126 | 16.67 % | 16.67 % | 16.67 % | 50 % | 54027836 |
25 | NC_006363 | TGCCGG | 2 | 12 | 31697 | 31708 | 0 % | 16.67 % | 50 % | 33.33 % | 54027841 |
26 | NC_006363 | GCGGTC | 2 | 12 | 33103 | 33114 | 0 % | 16.67 % | 50 % | 33.33 % | 54027842 |
27 | NC_006363 | GCTGGT | 2 | 12 | 33513 | 33524 | 0 % | 33.33 % | 50 % | 16.67 % | 54027842 |
28 | NC_006363 | GCGCGA | 2 | 12 | 35187 | 35198 | 16.67 % | 0 % | 50 % | 33.33 % | 54027845 |
29 | NC_006363 | TCGGTC | 2 | 12 | 35899 | 35910 | 0 % | 33.33 % | 33.33 % | 33.33 % | 54027846 |
30 | NC_006363 | CGACAT | 2 | 12 | 36215 | 36226 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 54027847 |
31 | NC_006363 | CGACAC | 3 | 18 | 36242 | 36259 | 33.33 % | 0 % | 16.67 % | 50 % | 54027847 |
32 | NC_006363 | CACCTA | 2 | 12 | 37390 | 37401 | 33.33 % | 16.67 % | 0 % | 50 % | 54027848 |
33 | NC_006363 | CGGGTG | 2 | 12 | 37799 | 37810 | 0 % | 16.67 % | 66.67 % | 16.67 % | 54027848 |
34 | NC_006363 | CGCCCG | 2 | 12 | 37989 | 38000 | 0 % | 0 % | 33.33 % | 66.67 % | 54027848 |
35 | NC_006363 | CTCGAC | 2 | 12 | 38435 | 38446 | 16.67 % | 16.67 % | 16.67 % | 50 % | 54027848 |
36 | NC_006363 | TCGCCC | 2 | 12 | 39999 | 40010 | 0 % | 16.67 % | 16.67 % | 66.67 % | 54027849 |
37 | NC_006363 | ACACCG | 2 | 12 | 40425 | 40436 | 33.33 % | 0 % | 16.67 % | 50 % | 54027849 |
38 | NC_006363 | GCGCTC | 2 | 12 | 42427 | 42438 | 0 % | 16.67 % | 33.33 % | 50 % | 54027851 |
39 | NC_006363 | CGCCTA | 2 | 12 | 46620 | 46631 | 16.67 % | 16.67 % | 16.67 % | 50 % | 54027854 |
40 | NC_006363 | CGCCTA | 2 | 12 | 46746 | 46757 | 16.67 % | 16.67 % | 16.67 % | 50 % | 54027854 |
41 | NC_006363 | CGCCTA | 2 | 12 | 46872 | 46883 | 16.67 % | 16.67 % | 16.67 % | 50 % | 54027854 |
42 | NC_006363 | TCGCTT | 2 | 12 | 46997 | 47008 | 0 % | 50 % | 16.67 % | 33.33 % | 54027854 |
43 | NC_006363 | CGAAGC | 2 | 12 | 53168 | 53179 | 33.33 % | 0 % | 33.33 % | 33.33 % | 54027862 |
44 | NC_006363 | AAGACC | 2 | 12 | 53719 | 53730 | 50 % | 0 % | 16.67 % | 33.33 % | 54027863 |
45 | NC_006363 | GGAGCG | 2 | 12 | 56740 | 56751 | 16.67 % | 0 % | 66.67 % | 16.67 % | 54027866 |
46 | NC_006363 | TGCGCG | 2 | 12 | 58241 | 58252 | 0 % | 16.67 % | 50 % | 33.33 % | 54027867 |
47 | NC_006363 | TCGATG | 2 | 12 | 61617 | 61628 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 54027872 |
48 | NC_006363 | ATGGCG | 2 | 12 | 63490 | 63501 | 16.67 % | 16.67 % | 50 % | 16.67 % | 54027876 |
49 | NC_006363 | CAGGGC | 2 | 12 | 64527 | 64538 | 16.67 % | 0 % | 50 % | 33.33 % | 54027876 |
50 | NC_006363 | CCCGGC | 2 | 12 | 65127 | 65138 | 0 % | 0 % | 33.33 % | 66.67 % | 54027876 |
51 | NC_006363 | ACCAGC | 2 | 12 | 65179 | 65190 | 33.33 % | 0 % | 16.67 % | 50 % | 54027876 |
52 | NC_006363 | CTGATC | 2 | 12 | 65491 | 65502 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 54027877 |
53 | NC_006363 | TCCACC | 2 | 12 | 68804 | 68815 | 16.67 % | 16.67 % | 0 % | 66.67 % | 54027882 |
54 | NC_006363 | GAGCCA | 2 | 12 | 70059 | 70070 | 33.33 % | 0 % | 33.33 % | 33.33 % | 54027885 |
55 | NC_006363 | GAGGGT | 2 | 12 | 70284 | 70295 | 16.67 % | 16.67 % | 66.67 % | 0 % | 54027885 |
56 | NC_006363 | GGTCGA | 2 | 12 | 70774 | 70785 | 16.67 % | 16.67 % | 50 % | 16.67 % | 54027886 |
57 | NC_006363 | GATCCG | 2 | 12 | 72010 | 72021 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 54027887 |
58 | NC_006363 | TCGCGT | 2 | 12 | 75378 | 75389 | 0 % | 33.33 % | 33.33 % | 33.33 % | 54027891 |
59 | NC_006363 | CGGGGT | 2 | 12 | 75542 | 75553 | 0 % | 16.67 % | 66.67 % | 16.67 % | 54027891 |
60 | NC_006363 | GCGAAC | 2 | 12 | 76902 | 76913 | 33.33 % | 0 % | 33.33 % | 33.33 % | 54027894 |
61 | NC_006363 | CTCGAC | 2 | 12 | 78093 | 78104 | 16.67 % | 16.67 % | 16.67 % | 50 % | 54027895 |
62 | NC_006363 | GTTGGT | 2 | 12 | 81253 | 81264 | 0 % | 50 % | 50 % | 0 % | 54027899 |
63 | NC_006363 | GATGTG | 2 | 12 | 82414 | 82425 | 16.67 % | 33.33 % | 50 % | 0 % | 54027899 |
64 | NC_006363 | CGATCG | 2 | 12 | 84195 | 84206 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 54027901 |