Penta-nucleotide Repeats of Nocardia farcinica IFM 10152 plasmid pNF1
Total Repeats: 163
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_006362 | TGGTG | 2 | 10 | 5343 | 5352 | 0 % | 40 % | 60 % | 0 % | 54027654 |
2 | NC_006362 | CGGGG | 2 | 10 | 6292 | 6301 | 0 % | 0 % | 80 % | 20 % | 54027655 |
3 | NC_006362 | GACTG | 2 | 10 | 10307 | 10316 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
4 | NC_006362 | GCCAC | 2 | 10 | 11204 | 11213 | 20 % | 0 % | 20 % | 60 % | 54027660 |
5 | NC_006362 | CGCCC | 2 | 10 | 12924 | 12933 | 0 % | 0 % | 20 % | 80 % | 54027664 |
6 | NC_006362 | GGTTC | 2 | 10 | 13503 | 13512 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
7 | NC_006362 | GGGTG | 2 | 10 | 14702 | 14711 | 0 % | 20 % | 80 % | 0 % | 54027665 |
8 | NC_006362 | CCGGA | 2 | 10 | 16628 | 16637 | 20 % | 0 % | 40 % | 40 % | 54027667 |
9 | NC_006362 | ACCCG | 2 | 10 | 17169 | 17178 | 20 % | 0 % | 20 % | 60 % | 54027667 |
10 | NC_006362 | CCGGC | 2 | 10 | 18731 | 18740 | 0 % | 0 % | 40 % | 60 % | 54027669 |
11 | NC_006362 | CGGAT | 2 | 10 | 19171 | 19180 | 20 % | 20 % | 40 % | 20 % | 54027669 |
12 | NC_006362 | CGGCG | 2 | 10 | 19928 | 19937 | 0 % | 0 % | 60 % | 40 % | 54027669 |
13 | NC_006362 | GGCAC | 2 | 10 | 20838 | 20847 | 20 % | 0 % | 40 % | 40 % | 54027670 |
14 | NC_006362 | CCGGA | 2 | 10 | 23310 | 23319 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
15 | NC_006362 | CGGCT | 2 | 10 | 25820 | 25829 | 0 % | 20 % | 40 % | 40 % | 54027673 |
16 | NC_006362 | CCAGG | 2 | 10 | 28989 | 28998 | 20 % | 0 % | 40 % | 40 % | 54027676 |
17 | NC_006362 | CTCGA | 2 | 10 | 31125 | 31134 | 20 % | 20 % | 20 % | 40 % | 54027676 |
18 | NC_006362 | GGCAG | 2 | 10 | 31523 | 31532 | 20 % | 0 % | 60 % | 20 % | 54027677 |
19 | NC_006362 | ATCGA | 2 | 10 | 32343 | 32352 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
20 | NC_006362 | TGTCG | 2 | 10 | 32903 | 32912 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
21 | NC_006362 | GGGAG | 2 | 10 | 33027 | 33036 | 20 % | 0 % | 80 % | 0 % | Non-Coding |
22 | NC_006362 | GAACT | 2 | 10 | 34145 | 34154 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
23 | NC_006362 | TGTCG | 3 | 15 | 34801 | 34815 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
24 | NC_006362 | ACGGA | 2 | 10 | 35006 | 35015 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
25 | NC_006362 | GAACC | 2 | 10 | 35905 | 35914 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
26 | NC_006362 | CGCGC | 2 | 10 | 42020 | 42029 | 0 % | 0 % | 40 % | 60 % | 54027682 |
27 | NC_006362 | GCGCG | 2 | 10 | 43571 | 43580 | 0 % | 0 % | 60 % | 40 % | 54027683 |
28 | NC_006362 | CGCGG | 2 | 10 | 43978 | 43987 | 0 % | 0 % | 60 % | 40 % | 54027684 |
29 | NC_006362 | ACACC | 2 | 10 | 44772 | 44781 | 40 % | 0 % | 0 % | 60 % | 54027685 |
30 | NC_006362 | TGGCG | 2 | 10 | 45153 | 45162 | 0 % | 20 % | 60 % | 20 % | 54027685 |
31 | NC_006362 | CGGGA | 2 | 10 | 45636 | 45645 | 20 % | 0 % | 60 % | 20 % | 54027686 |
32 | NC_006362 | GCCCC | 2 | 10 | 46001 | 46010 | 0 % | 0 % | 20 % | 80 % | 54027686 |
33 | NC_006362 | CGGGC | 2 | 10 | 46833 | 46842 | 0 % | 0 % | 60 % | 40 % | 54027687 |
34 | NC_006362 | TCGCG | 2 | 10 | 49344 | 49353 | 0 % | 20 % | 40 % | 40 % | 54027690 |
35 | NC_006362 | GCCGC | 2 | 10 | 49397 | 49406 | 0 % | 0 % | 40 % | 60 % | 54027690 |
36 | NC_006362 | GCCCG | 2 | 10 | 49733 | 49742 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
37 | NC_006362 | GTGGC | 2 | 10 | 50474 | 50483 | 0 % | 20 % | 60 % | 20 % | 54027692 |
38 | NC_006362 | GTGGC | 2 | 10 | 51107 | 51116 | 0 % | 20 % | 60 % | 20 % | 54027692 |
39 | NC_006362 | TCGCC | 2 | 10 | 52965 | 52974 | 0 % | 20 % | 20 % | 60 % | 54027695 |
40 | NC_006362 | CGGGC | 2 | 10 | 53062 | 53071 | 0 % | 0 % | 60 % | 40 % | 54027695 |
41 | NC_006362 | GGGTG | 2 | 10 | 54589 | 54598 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
42 | NC_006362 | CCGCA | 2 | 10 | 55034 | 55043 | 20 % | 0 % | 20 % | 60 % | 54027697 |
43 | NC_006362 | CATCG | 2 | 10 | 56728 | 56737 | 20 % | 20 % | 20 % | 40 % | 54027699 |
44 | NC_006362 | CCGAC | 2 | 10 | 57767 | 57776 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
45 | NC_006362 | CCTGC | 2 | 10 | 57980 | 57989 | 0 % | 20 % | 20 % | 60 % | 54027701 |
46 | NC_006362 | CGCAC | 2 | 10 | 60728 | 60737 | 20 % | 0 % | 20 % | 60 % | 54027703 |
47 | NC_006362 | TCGCT | 2 | 10 | 60892 | 60901 | 0 % | 40 % | 20 % | 40 % | 54027703 |
48 | NC_006362 | GCCGA | 2 | 10 | 61597 | 61606 | 20 % | 0 % | 40 % | 40 % | 54027703 |
49 | NC_006362 | GACCA | 2 | 10 | 62635 | 62644 | 40 % | 0 % | 20 % | 40 % | 54027704 |
50 | NC_006362 | CCCGA | 2 | 10 | 62815 | 62824 | 20 % | 0 % | 20 % | 60 % | 54027704 |
51 | NC_006362 | TTCCC | 2 | 10 | 63922 | 63931 | 0 % | 40 % | 0 % | 60 % | 54027705 |
52 | NC_006362 | GAACC | 2 | 10 | 64147 | 64156 | 40 % | 0 % | 20 % | 40 % | 54027705 |
53 | NC_006362 | CCACA | 2 | 10 | 64639 | 64648 | 40 % | 0 % | 0 % | 60 % | 54027706 |
54 | NC_006362 | GTGCG | 2 | 10 | 65485 | 65494 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
55 | NC_006362 | CCGAC | 2 | 10 | 66533 | 66542 | 20 % | 0 % | 20 % | 60 % | 54027707 |
56 | NC_006362 | GGGCT | 2 | 10 | 66784 | 66793 | 0 % | 20 % | 60 % | 20 % | 54027707 |
57 | NC_006362 | GCAGC | 2 | 10 | 68119 | 68128 | 20 % | 0 % | 40 % | 40 % | 54027708 |
58 | NC_006362 | ACCCA | 2 | 10 | 71053 | 71062 | 40 % | 0 % | 0 % | 60 % | 54027711 |
59 | NC_006362 | ACATC | 2 | 10 | 72070 | 72079 | 40 % | 20 % | 0 % | 40 % | 54027712 |
60 | NC_006362 | GCCGC | 2 | 10 | 72332 | 72341 | 0 % | 0 % | 40 % | 60 % | 54027712 |
61 | NC_006362 | TCCCG | 2 | 10 | 72535 | 72544 | 0 % | 20 % | 20 % | 60 % | 54027712 |
62 | NC_006362 | TCGCG | 2 | 10 | 72619 | 72628 | 0 % | 20 % | 40 % | 40 % | 54027712 |
63 | NC_006362 | CGGTC | 2 | 10 | 74239 | 74248 | 0 % | 20 % | 40 % | 40 % | 54027713 |
64 | NC_006362 | GGGCC | 2 | 10 | 74943 | 74952 | 0 % | 0 % | 60 % | 40 % | 54027714 |
65 | NC_006362 | ACCCA | 2 | 10 | 75837 | 75846 | 40 % | 0 % | 0 % | 60 % | 54027715 |
66 | NC_006362 | CACCG | 2 | 10 | 75965 | 75974 | 20 % | 0 % | 20 % | 60 % | 54027715 |
67 | NC_006362 | CGAAC | 2 | 10 | 76531 | 76540 | 40 % | 0 % | 20 % | 40 % | 54027715 |
68 | NC_006362 | CCGCG | 2 | 10 | 76591 | 76600 | 0 % | 0 % | 40 % | 60 % | 54027715 |
69 | NC_006362 | GTCGG | 2 | 10 | 78309 | 78318 | 0 % | 20 % | 60 % | 20 % | 54027717 |
70 | NC_006362 | CGTCG | 2 | 10 | 78438 | 78447 | 0 % | 20 % | 40 % | 40 % | 54027717 |
71 | NC_006362 | AGGGC | 2 | 10 | 78886 | 78895 | 20 % | 0 % | 60 % | 20 % | 54027717 |
72 | NC_006362 | CCGGC | 2 | 10 | 81537 | 81546 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
73 | NC_006362 | GTCCT | 2 | 10 | 81623 | 81632 | 0 % | 40 % | 20 % | 40 % | 54027719 |
74 | NC_006362 | CGGGC | 2 | 10 | 82357 | 82366 | 0 % | 0 % | 60 % | 40 % | 54027719 |
75 | NC_006362 | CAGGA | 2 | 10 | 84106 | 84115 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
76 | NC_006362 | CAACA | 2 | 10 | 84985 | 84994 | 60 % | 0 % | 0 % | 40 % | Non-Coding |
77 | NC_006362 | CGGCG | 2 | 10 | 88527 | 88536 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
78 | NC_006362 | GGTCG | 2 | 10 | 90460 | 90469 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
79 | NC_006362 | AGGAG | 2 | 10 | 90865 | 90874 | 40 % | 0 % | 60 % | 0 % | 54027726 |
80 | NC_006362 | CCTCG | 2 | 10 | 91405 | 91414 | 0 % | 20 % | 20 % | 60 % | 54027727 |
81 | NC_006362 | GGTGG | 2 | 10 | 92358 | 92367 | 0 % | 20 % | 80 % | 0 % | 54027728 |
82 | NC_006362 | GGGCT | 2 | 10 | 92517 | 92526 | 0 % | 20 % | 60 % | 20 % | 54027728 |
83 | NC_006362 | TCGGT | 2 | 10 | 93829 | 93838 | 0 % | 40 % | 40 % | 20 % | 54027729 |
84 | NC_006362 | CGCGC | 2 | 10 | 96311 | 96320 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
85 | NC_006362 | GGCCG | 2 | 10 | 96977 | 96986 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
86 | NC_006362 | CCAGG | 2 | 10 | 97363 | 97372 | 20 % | 0 % | 40 % | 40 % | 54027733 |
87 | NC_006362 | GCGGT | 2 | 10 | 99807 | 99816 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
88 | NC_006362 | ACGGA | 2 | 10 | 100388 | 100397 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
89 | NC_006362 | CGCTG | 2 | 10 | 103795 | 103804 | 0 % | 20 % | 40 % | 40 % | 54027736 |
90 | NC_006362 | GCGGA | 2 | 10 | 104157 | 104166 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
91 | NC_006362 | TCGCC | 2 | 10 | 105996 | 106005 | 0 % | 20 % | 20 % | 60 % | 54027737 |
92 | NC_006362 | CGCGG | 2 | 10 | 106354 | 106363 | 0 % | 0 % | 60 % | 40 % | 54027737 |
93 | NC_006362 | AGTCC | 2 | 10 | 106781 | 106790 | 20 % | 20 % | 20 % | 40 % | 54027738 |
94 | NC_006362 | CGCGG | 2 | 10 | 108090 | 108099 | 0 % | 0 % | 60 % | 40 % | 54027738 |
95 | NC_006362 | TCGCC | 2 | 10 | 108102 | 108111 | 0 % | 20 % | 20 % | 60 % | 54027738 |
96 | NC_006362 | GGTCG | 2 | 10 | 108454 | 108463 | 0 % | 20 % | 60 % | 20 % | 54027738 |
97 | NC_006362 | CAGCG | 2 | 10 | 108936 | 108945 | 20 % | 0 % | 40 % | 40 % | 54027739 |
98 | NC_006362 | CACCG | 2 | 10 | 110479 | 110488 | 20 % | 0 % | 20 % | 60 % | 54027740 |
99 | NC_006362 | AGCCG | 2 | 10 | 111656 | 111665 | 20 % | 0 % | 40 % | 40 % | 54027741 |
100 | NC_006362 | GCGGT | 2 | 10 | 112126 | 112135 | 0 % | 20 % | 60 % | 20 % | 54027742 |
101 | NC_006362 | CCGGA | 2 | 10 | 112513 | 112522 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
102 | NC_006362 | GCAGC | 2 | 10 | 113357 | 113366 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
103 | NC_006362 | GTTGG | 2 | 10 | 113478 | 113487 | 0 % | 40 % | 60 % | 0 % | Non-Coding |
104 | NC_006362 | ACCGG | 2 | 10 | 114400 | 114409 | 20 % | 0 % | 40 % | 40 % | 54027743 |
105 | NC_006362 | CGACC | 2 | 10 | 115932 | 115941 | 20 % | 0 % | 20 % | 60 % | 54027745 |
106 | NC_006362 | ACCTG | 2 | 10 | 116294 | 116303 | 20 % | 20 % | 20 % | 40 % | 54027745 |
107 | NC_006362 | GAGCT | 2 | 10 | 119475 | 119484 | 20 % | 20 % | 40 % | 20 % | 54027748 |
108 | NC_006362 | CGCAG | 2 | 10 | 120506 | 120515 | 20 % | 0 % | 40 % | 40 % | 54027748 |
109 | NC_006362 | CACCC | 2 | 10 | 120524 | 120533 | 20 % | 0 % | 0 % | 80 % | 54027748 |
110 | NC_006362 | CCCTC | 2 | 10 | 120788 | 120797 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
111 | NC_006362 | CATTG | 2 | 10 | 123155 | 123164 | 20 % | 40 % | 20 % | 20 % | 54027750 |
112 | NC_006362 | CAGCA | 2 | 10 | 124119 | 124128 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
113 | NC_006362 | TCAGG | 2 | 10 | 127829 | 127838 | 20 % | 20 % | 40 % | 20 % | 54027755 |
114 | NC_006362 | CGCTG | 2 | 10 | 128544 | 128553 | 0 % | 20 % | 40 % | 40 % | 54027756 |
115 | NC_006362 | GTCGG | 2 | 10 | 129444 | 129453 | 0 % | 20 % | 60 % | 20 % | 54027756 |
116 | NC_006362 | CCGAT | 2 | 10 | 130065 | 130074 | 20 % | 20 % | 20 % | 40 % | 54027756 |
117 | NC_006362 | GCGGG | 2 | 10 | 130146 | 130155 | 0 % | 0 % | 80 % | 20 % | 54027756 |
118 | NC_006362 | CCGAA | 2 | 10 | 132195 | 132204 | 40 % | 0 % | 20 % | 40 % | 54027756 |
119 | NC_006362 | CGACC | 2 | 10 | 133249 | 133258 | 20 % | 0 % | 20 % | 60 % | 54027756 |
120 | NC_006362 | GCCGC | 2 | 10 | 133290 | 133299 | 0 % | 0 % | 40 % | 60 % | 54027756 |
121 | NC_006362 | GCCGC | 2 | 10 | 134511 | 134520 | 0 % | 0 % | 40 % | 60 % | 54027756 |
122 | NC_006362 | TCGAG | 2 | 10 | 136317 | 136326 | 20 % | 20 % | 40 % | 20 % | 54027758 |
123 | NC_006362 | CGGCG | 2 | 10 | 137518 | 137527 | 0 % | 0 % | 60 % | 40 % | 54027759 |
124 | NC_006362 | TCCAC | 2 | 10 | 138022 | 138031 | 20 % | 20 % | 0 % | 60 % | 54027759 |
125 | NC_006362 | GCGCG | 2 | 10 | 139066 | 139075 | 0 % | 0 % | 60 % | 40 % | 54027761 |
126 | NC_006362 | TGCGG | 2 | 10 | 139249 | 139258 | 0 % | 20 % | 60 % | 20 % | 54027761 |
127 | NC_006362 | GCGCG | 2 | 10 | 140957 | 140966 | 0 % | 0 % | 60 % | 40 % | 54027761 |
128 | NC_006362 | CCGCT | 2 | 10 | 141266 | 141275 | 0 % | 20 % | 20 % | 60 % | 54027762 |
129 | NC_006362 | GCGCC | 2 | 10 | 141559 | 141568 | 0 % | 0 % | 40 % | 60 % | 54027763 |
130 | NC_006362 | GCGCG | 2 | 10 | 141696 | 141705 | 0 % | 0 % | 60 % | 40 % | 54027763 |
131 | NC_006362 | GTGGC | 2 | 10 | 143512 | 143521 | 0 % | 20 % | 60 % | 20 % | 54027765 |
132 | NC_006362 | TGCGC | 2 | 10 | 144623 | 144632 | 0 % | 20 % | 40 % | 40 % | 54027766 |
133 | NC_006362 | GTTCG | 2 | 10 | 145249 | 145258 | 0 % | 40 % | 40 % | 20 % | 54027767 |
134 | NC_006362 | GATCG | 2 | 10 | 148754 | 148763 | 20 % | 20 % | 40 % | 20 % | 54027774 |
135 | NC_006362 | GCGCC | 2 | 10 | 150096 | 150105 | 0 % | 0 % | 40 % | 60 % | 54027775 |
136 | NC_006362 | CCGGG | 2 | 10 | 150661 | 150670 | 0 % | 0 % | 60 % | 40 % | 54027776 |
137 | NC_006362 | GGGGC | 2 | 10 | 150863 | 150872 | 0 % | 0 % | 80 % | 20 % | 54027776 |
138 | NC_006362 | TGCAA | 2 | 10 | 151820 | 151829 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
139 | NC_006362 | CGAAC | 2 | 10 | 153515 | 153524 | 40 % | 0 % | 20 % | 40 % | 54027781 |
140 | NC_006362 | AGGGG | 2 | 10 | 154637 | 154646 | 20 % | 0 % | 80 % | 0 % | 54027782 |
141 | NC_006362 | CATCG | 2 | 10 | 156390 | 156399 | 20 % | 20 % | 20 % | 40 % | 54027783 |
142 | NC_006362 | ATCCA | 2 | 10 | 159888 | 159897 | 40 % | 20 % | 0 % | 40 % | 54027787 |
143 | NC_006362 | CGCGC | 2 | 10 | 162401 | 162410 | 0 % | 0 % | 40 % | 60 % | 54027789 |
144 | NC_006362 | CCACG | 2 | 10 | 164299 | 164308 | 20 % | 0 % | 20 % | 60 % | 54027790 |
145 | NC_006362 | CCTGC | 2 | 10 | 164555 | 164564 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
146 | NC_006362 | CCCGG | 2 | 10 | 165066 | 165075 | 0 % | 0 % | 40 % | 60 % | 54027791 |
147 | NC_006362 | TCGAC | 2 | 10 | 165910 | 165919 | 20 % | 20 % | 20 % | 40 % | 54027791 |
148 | NC_006362 | GATCA | 2 | 10 | 167090 | 167099 | 40 % | 20 % | 20 % | 20 % | 54027793 |
149 | NC_006362 | TGCGG | 2 | 10 | 167517 | 167526 | 0 % | 20 % | 60 % | 20 % | 54027793 |
150 | NC_006362 | GCTGC | 2 | 10 | 167613 | 167622 | 0 % | 20 % | 40 % | 40 % | 54027793 |
151 | NC_006362 | CAGCG | 2 | 10 | 169676 | 169685 | 20 % | 0 % | 40 % | 40 % | 54027797 |
152 | NC_006362 | GATCA | 2 | 10 | 170365 | 170374 | 40 % | 20 % | 20 % | 20 % | 54027798 |
153 | NC_006362 | CGGGC | 2 | 10 | 172652 | 172661 | 0 % | 0 % | 60 % | 40 % | 54027800 |
154 | NC_006362 | GGCTC | 2 | 10 | 173281 | 173290 | 0 % | 20 % | 40 % | 40 % | 54027800 |
155 | NC_006362 | GGCCG | 2 | 10 | 173534 | 173543 | 0 % | 0 % | 60 % | 40 % | 54027800 |
156 | NC_006362 | GACGC | 2 | 10 | 174080 | 174089 | 20 % | 0 % | 40 % | 40 % | 54027801 |
157 | NC_006362 | CACTC | 2 | 10 | 174635 | 174644 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
158 | NC_006362 | GCGCT | 2 | 10 | 174976 | 174985 | 0 % | 20 % | 40 % | 40 % | 54027802 |
159 | NC_006362 | GAGGG | 2 | 10 | 175969 | 175978 | 20 % | 0 % | 80 % | 0 % | 54027804 |
160 | NC_006362 | ACGCG | 2 | 10 | 176387 | 176396 | 20 % | 0 % | 40 % | 40 % | 54027804 |
161 | NC_006362 | CCACG | 2 | 10 | 179548 | 179557 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
162 | NC_006362 | ACGCC | 2 | 10 | 179804 | 179813 | 20 % | 0 % | 20 % | 60 % | 54027807 |
163 | NC_006362 | AACCC | 2 | 10 | 179872 | 179881 | 40 % | 0 % | 0 % | 60 % | 54027807 |