MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Yersinia pseudotuberculosis IP 32953 plasmid pYV

Total Repeats: 185

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_006153	AGG	2	6	2814	2819	33.33 %	0 %	66.67 %	0 %	Non-Coding
2	NC_006153	CAC	2	6	2832	2837	33.33 %	0 %	0 %	66.67 %	Non-Coding
3	NC_006153	GAA	2	6	2858	2863	66.67 %	0 %	33.33 %	0 %	Non-Coding
4	NC_006153	TTG	2	6	3292	3297	0 %	66.67 %	33.33 %	0 %	Non-Coding
5	NC_006153	GGC	2	6	3309	3314	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_006153	TGT	2	6	3401	3406	0 %	66.67 %	33.33 %	0 %	Non-Coding
7	NC_006153	TGC	2	6	3679	3684	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8	NC_006153	GTC	2	6	3706	3711	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_006153	CGC	2	6	3785	3790	0 %	0 %	33.33 %	66.67 %	Non-Coding
10	NC_006153	TCC	2	6	4043	4048	0 %	33.33 %	0 %	66.67 %	Non-Coding
11	NC_006153	ACA	2	6	4228	4233	66.67 %	0 %	0 %	33.33 %	Non-Coding
12	NC_006153	TGT	2	6	4357	4362	0 %	66.67 %	33.33 %	0 %	Non-Coding
13	NC_006153	TAA	2	6	4366	4371	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_006153	AGG	2	6	4399	4404	33.33 %	0 %	66.67 %	0 %	Non-Coding
15	NC_006153	GAC	2	6	4482	4487	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_006153	CGA	2	6	4671	4676	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_006153	AGA	2	6	4715	4720	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_006153	AGG	2	6	4767	4772	33.33 %	0 %	66.67 %	0 %	Non-Coding
19	NC_006153	TCC	2	6	4786	4791	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_006153	ACG	2	6	4817	4822	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_006153	ACA	2	6	6297	6302	66.67 %	0 %	0 %	33.33 %	Non-Coding
22	NC_006153	ACG	2	6	6395	6400	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
23	NC_006153	TGC	2	6	6439	6444	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24	NC_006153	ACC	2	6	6457	6462	33.33 %	0 %	0 %	66.67 %	Non-Coding
25	NC_006153	GCT	2	6	6511	6516	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
26	NC_006153	CCA	2	6	6713	6718	33.33 %	0 %	0 %	66.67 %	Non-Coding
27	NC_006153	TAA	2	6	6741	6746	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_006153	CAG	2	6	7316	7321	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
29	NC_006153	GCT	2	6	7341	7346	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_006153	GGC	2	6	7444	7449	0 %	0 %	66.67 %	33.33 %	Non-Coding
31	NC_006153	AAC	2	6	7928	7933	66.67 %	0 %	0 %	33.33 %	Non-Coding
32	NC_006153	TAA	2	6	9036	9041	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_006153	AGA	2	6	10495	10500	66.67 %	0 %	33.33 %	0 %	Non-Coding
34	NC_006153	ACT	2	6	10580	10585	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
35	NC_006153	ATA	2	6	10676	10681	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_006153	ACA	2	6	10796	10801	66.67 %	0 %	0 %	33.33 %	Non-Coding
37	NC_006153	TAT	2	6	10831	10836	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_006153	TAA	2	6	10871	10876	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_006153	GAG	2	6	10963	10968	33.33 %	0 %	66.67 %	0 %	Non-Coding
40	NC_006153	CGC	2	6	11130	11135	0 %	0 %	33.33 %	66.67 %	Non-Coding
41	NC_006153	AAC	2	6	11143	11148	66.67 %	0 %	0 %	33.33 %	Non-Coding
42	NC_006153	GAT	2	6	11243	11248	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_006153	TCA	2	6	11304	11309	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
44	NC_006153	AAC	2	6	13732	13737	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_006153	AAT	2	6	14447	14452	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_006153	AAT	2	6	14510	14515	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_006153	ATT	3	9	14541	14549	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_006153	CAA	2	6	14664	14669	66.67 %	0 %	0 %	33.33 %	Non-Coding
49	NC_006153	CTT	2	6	14825	14830	0 %	66.67 %	0 %	33.33 %	Non-Coding
50	NC_006153	TAC	2	6	15059	15064	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51	NC_006153	CAA	2	6	15079	15084	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_006153	AAC	2	6	15112	15117	66.67 %	0 %	0 %	33.33 %	Non-Coding
53	NC_006153	TAA	2	6	15177	15182	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_006153	TGA	2	6	15202	15207	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_006153	GAG	2	6	15223	15228	33.33 %	0 %	66.67 %	0 %	Non-Coding
56	NC_006153	AAT	3	9	15263	15271	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_006153	TGA	2	6	15292	15297	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
58	NC_006153	TAA	2	6	15300	15305	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_006153	GGA	2	6	15341	15346	33.33 %	0 %	66.67 %	0 %	Non-Coding
60	NC_006153	CTT	2	6	15435	15440	0 %	66.67 %	0 %	33.33 %	Non-Coding
61	NC_006153	GTT	2	6	16614	16619	0 %	66.67 %	33.33 %	0 %	Non-Coding
62	NC_006153	CTC	2	6	17284	17289	0 %	33.33 %	0 %	66.67 %	Non-Coding
63	NC_006153	GAG	2	6	17299	17304	33.33 %	0 %	66.67 %	0 %	Non-Coding
64	NC_006153	GCG	2	6	17305	17310	0 %	0 %	66.67 %	33.33 %	Non-Coding
65	NC_006153	CCA	2	6	17314	17319	33.33 %	0 %	0 %	66.67 %	Non-Coding
66	NC_006153	CAC	2	6	17435	17440	33.33 %	0 %	0 %	66.67 %	Non-Coding
67	NC_006153	CTC	2	6	17473	17478	0 %	33.33 %	0 %	66.67 %	Non-Coding
68	NC_006153	ACA	2	6	19123	19128	66.67 %	0 %	0 %	33.33 %	Non-Coding
69	NC_006153	TAA	2	6	19871	19876	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NC_006153	CAA	2	6	19879	19884	66.67 %	0 %	0 %	33.33 %	Non-Coding
71	NC_006153	ATA	2	6	20299	20304	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_006153	AAC	2	6	20392	20397	66.67 %	0 %	0 %	33.33 %	Non-Coding
73	NC_006153	CAG	2	6	20403	20408	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
74	NC_006153	TAA	2	6	20471	20476	66.67 %	33.33 %	0 %	0 %	Non-Coding
75	NC_006153	TGC	2	6	21934	21939	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
76	NC_006153	CGC	2	6	21940	21945	0 %	0 %	33.33 %	66.67 %	Non-Coding
77	NC_006153	AAG	2	6	23026	23031	66.67 %	0 %	33.33 %	0 %	Non-Coding
78	NC_006153	TCT	2	6	23036	23041	0 %	66.67 %	0 %	33.33 %	Non-Coding
79	NC_006153	TAT	2	6	25255	25260	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_006153	AAC	2	6	25308	25313	66.67 %	0 %	0 %	33.33 %	Non-Coding
81	NC_006153	CGC	2	6	25353	25358	0 %	0 %	33.33 %	66.67 %	Non-Coding
82	NC_006153	GAC	2	6	25435	25440	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
83	NC_006153	CTG	2	6	25476	25481	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
84	NC_006153	TCG	2	6	25502	25507	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
85	NC_006153	CAG	2	6	25512	25517	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
86	NC_006153	CAC	2	6	25699	25704	33.33 %	0 %	0 %	66.67 %	Non-Coding
87	NC_006153	TTA	2	6	25956	25961	33.33 %	66.67 %	0 %	0 %	Non-Coding
88	NC_006153	TCC	2	6	26254	26259	0 %	33.33 %	0 %	66.67 %	Non-Coding
89	NC_006153	CAG	2	6	26315	26320	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
90	NC_006153	CTT	2	6	27322	27327	0 %	66.67 %	0 %	33.33 %	Non-Coding
91	NC_006153	GAA	2	6	27354	27359	66.67 %	0 %	33.33 %	0 %	Non-Coding
92	NC_006153	GCC	2	6	27441	27446	0 %	0 %	33.33 %	66.67 %	Non-Coding
93	NC_006153	GTG	2	6	27465	27470	0 %	33.33 %	66.67 %	0 %	Non-Coding
94	NC_006153	CAA	2	6	27547	27552	66.67 %	0 %	0 %	33.33 %	Non-Coding
95	NC_006153	GCC	2	6	27558	27563	0 %	0 %	33.33 %	66.67 %	Non-Coding
96	NC_006153	TCT	2	6	27723	27728	0 %	66.67 %	0 %	33.33 %	Non-Coding
97	NC_006153	CAC	2	6	27923	27928	33.33 %	0 %	0 %	66.67 %	Non-Coding
98	NC_006153	ATC	2	6	27996	28001	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
99	NC_006153	TGA	2	6	28067	28072	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
100	NC_006153	ATC	2	6	28129	28134	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
101	NC_006153	GAT	2	6	28402	28407	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
102	NC_006153	TAC	2	6	29043	29048	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
103	NC_006153	TAA	2	6	29079	29084	66.67 %	33.33 %	0 %	0 %	Non-Coding
104	NC_006153	TCC	2	6	29182	29187	0 %	33.33 %	0 %	66.67 %	Non-Coding
105	NC_006153	ATT	2	6	29196	29201	33.33 %	66.67 %	0 %	0 %	Non-Coding
106	NC_006153	ATT	2	6	29235	29240	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_006153	TAT	2	6	29268	29273	33.33 %	66.67 %	0 %	0 %	Non-Coding
108	NC_006153	TAA	2	6	29314	29319	66.67 %	33.33 %	0 %	0 %	Non-Coding
109	NC_006153	ACA	2	6	29361	29366	66.67 %	0 %	0 %	33.33 %	Non-Coding
110	NC_006153	AAT	2	6	29483	29488	66.67 %	33.33 %	0 %	0 %	Non-Coding
111	NC_006153	AAT	2	6	30929	30934	66.67 %	33.33 %	0 %	0 %	Non-Coding
112	NC_006153	AAG	2	6	30999	31004	66.67 %	0 %	33.33 %	0 %	Non-Coding
113	NC_006153	ATT	2	6	31010	31015	33.33 %	66.67 %	0 %	0 %	Non-Coding
114	NC_006153	AAT	2	6	31058	31063	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_006153	TAT	2	6	31064	31069	33.33 %	66.67 %	0 %	0 %	Non-Coding
116	NC_006153	TTA	2	6	31072	31077	33.33 %	66.67 %	0 %	0 %	Non-Coding
117	NC_006153	TAA	2	6	31126	31131	66.67 %	33.33 %	0 %	0 %	Non-Coding
118	NC_006153	CCA	2	6	31134	31139	33.33 %	0 %	0 %	66.67 %	Non-Coding
119	NC_006153	TCC	2	6	31157	31162	0 %	33.33 %	0 %	66.67 %	Non-Coding
120	NC_006153	TTG	2	6	31245	31250	0 %	66.67 %	33.33 %	0 %	Non-Coding
121	NC_006153	AAG	2	6	31279	31284	66.67 %	0 %	33.33 %	0 %	Non-Coding
122	NC_006153	TGC	2	6	31299	31304	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
123	NC_006153	AGC	2	6	31307	31312	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
124	NC_006153	AAT	2	6	31330	31335	66.67 %	33.33 %	0 %	0 %	Non-Coding
125	NC_006153	TAA	2	6	32163	32168	66.67 %	33.33 %	0 %	0 %	Non-Coding
126	NC_006153	TAA	2	6	32230	32235	66.67 %	33.33 %	0 %	0 %	Non-Coding
127	NC_006153	ACA	2	6	32405	32410	66.67 %	0 %	0 %	33.33 %	Non-Coding
128	NC_006153	ATG	2	6	32435	32440	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
129	NC_006153	TGC	2	6	32473	32478	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
130	NC_006153	AAT	2	6	32480	32485	66.67 %	33.33 %	0 %	0 %	Non-Coding
131	NC_006153	CAA	2	6	32878	32883	66.67 %	0 %	0 %	33.33 %	Non-Coding
132	NC_006153	TCG	2	6	34912	34917	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
133	NC_006153	AGA	2	6	34997	35002	66.67 %	0 %	33.33 %	0 %	Non-Coding
134	NC_006153	TTC	2	6	35117	35122	0 %	66.67 %	0 %	33.33 %	Non-Coding
135	NC_006153	ATT	2	6	35195	35200	33.33 %	66.67 %	0 %	0 %	Non-Coding
136	NC_006153	CTT	2	6	35427	35432	0 %	66.67 %	0 %	33.33 %	Non-Coding
137	NC_006153	GTT	2	6	36129	36134	0 %	66.67 %	33.33 %	0 %	Non-Coding
138	NC_006153	ATT	2	6	36143	36148	33.33 %	66.67 %	0 %	0 %	Non-Coding
139	NC_006153	CTA	2	6	36348	36353	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
140	NC_006153	TTA	2	6	36396	36401	33.33 %	66.67 %	0 %	0 %	Non-Coding
141	NC_006153	TAA	2	6	36411	36416	66.67 %	33.33 %	0 %	0 %	Non-Coding
142	NC_006153	TCA	2	6	36541	36546	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
143	NC_006153	TCC	2	6	37478	37483	0 %	33.33 %	0 %	66.67 %	Non-Coding
144	NC_006153	CCT	2	6	40468	40473	0 %	33.33 %	0 %	66.67 %	Non-Coding
145	NC_006153	ACT	2	6	45247	45252	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
146	NC_006153	TTG	2	6	52320	52325	0 %	66.67 %	33.33 %	0 %	Non-Coding
147	NC_006153	CAA	2	6	52428	52433	66.67 %	0 %	0 %	33.33 %	Non-Coding
148	NC_006153	ATA	2	6	52578	52583	66.67 %	33.33 %	0 %	0 %	Non-Coding
149	NC_006153	GTG	2	6	52720	52725	0 %	33.33 %	66.67 %	0 %	Non-Coding
150	NC_006153	GTT	2	6	52751	52756	0 %	66.67 %	33.33 %	0 %	Non-Coding
151	NC_006153	AAT	2	6	52764	52769	66.67 %	33.33 %	0 %	0 %	Non-Coding
152	NC_006153	CAC	2	6	52776	52781	33.33 %	0 %	0 %	66.67 %	Non-Coding
153	NC_006153	ATC	2	6	52805	52810	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
154	NC_006153	TCT	2	6	52817	52822	0 %	66.67 %	0 %	33.33 %	Non-Coding
155	NC_006153	TAT	2	6	53252	53257	33.33 %	66.67 %	0 %	0 %	Non-Coding
156	NC_006153	TAA	2	6	53301	53306	66.67 %	33.33 %	0 %	0 %	Non-Coding
157	NC_006153	ATC	2	6	54427	54432	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
158	NC_006153	GGT	2	6	54445	54450	0 %	33.33 %	66.67 %	0 %	Non-Coding
159	NC_006153	TAT	2	6	61750	61755	33.33 %	66.67 %	0 %	0 %	Non-Coding
160	NC_006153	AAT	2	6	61818	61823	66.67 %	33.33 %	0 %	0 %	Non-Coding
161	NC_006153	AGT	2	6	61879	61884	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
162	NC_006153	ATA	2	6	62292	62297	66.67 %	33.33 %	0 %	0 %	Non-Coding
163	NC_006153	AAT	2	6	62320	62325	66.67 %	33.33 %	0 %	0 %	Non-Coding
164	NC_006153	AAT	3	9	62398	62406	66.67 %	33.33 %	0 %	0 %	Non-Coding
165	NC_006153	CCT	2	6	62410	62415	0 %	33.33 %	0 %	66.67 %	Non-Coding
166	NC_006153	CTC	2	6	62458	62463	0 %	33.33 %	0 %	66.67 %	Non-Coding
167	NC_006153	TAA	2	6	62602	62607	66.67 %	33.33 %	0 %	0 %	Non-Coding
168	NC_006153	CGG	2	6	62651	62656	0 %	0 %	66.67 %	33.33 %	Non-Coding
169	NC_006153	ATT	2	6	62733	62738	33.33 %	66.67 %	0 %	0 %	Non-Coding
170	NC_006153	TGT	2	6	64218	64223	0 %	66.67 %	33.33 %	0 %	Non-Coding
171	NC_006153	ATT	2	6	64241	64246	33.33 %	66.67 %	0 %	0 %	Non-Coding
172	NC_006153	CAG	2	6	64250	64255	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
173	NC_006153	GTG	2	6	64314	64319	0 %	33.33 %	66.67 %	0 %	Non-Coding
174	NC_006153	TAT	2	6	65844	65849	33.33 %	66.67 %	0 %	0 %	Non-Coding
175	NC_006153	TAA	2	6	65852	65857	66.67 %	33.33 %	0 %	0 %	Non-Coding
176	NC_006153	ATT	2	6	65893	65898	33.33 %	66.67 %	0 %	0 %	Non-Coding
177	NC_006153	AAT	2	6	66029	66034	66.67 %	33.33 %	0 %	0 %	Non-Coding
178	NC_006153	AAC	2	6	66053	66058	66.67 %	0 %	0 %	33.33 %	Non-Coding
179	NC_006153	CGG	2	6	66144	66149	0 %	0 %	66.67 %	33.33 %	Non-Coding
180	NC_006153	GAA	2	6	67059	67064	66.67 %	0 %	33.33 %	0 %	Non-Coding
181	NC_006153	ACC	2	6	67097	67102	33.33 %	0 %	0 %	66.67 %	Non-Coding
182	NC_006153	AGC	2	6	67111	67116	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
183	NC_006153	TTG	2	6	68388	68393	0 %	66.67 %	33.33 %	0 %	Non-Coding
184	NC_006153	TAA	2	6	68453	68458	66.67 %	33.33 %	0 %	0 %	Non-Coding
185	NC_006153	ATT	2	6	68466	68471	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.