Penta-nucleotide Coding Repeats of Photobacterium profundum SS9 plasmid pPBPR1
Total Repeats: 39
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_005871 | GAAAA | 2 | 10 | 930 | 939 | 80 % | 0 % | 20 % | 0 % | 47104027 |
2 | NC_005871 | GGGGC | 2 | 10 | 1702 | 1711 | 0 % | 0 % | 80 % | 20 % | 47104028 |
3 | NC_005871 | TCGAT | 2 | 10 | 2468 | 2477 | 20 % | 40 % | 20 % | 20 % | 47104029 |
4 | NC_005871 | AATCC | 2 | 10 | 6161 | 6170 | 40 % | 20 % | 0 % | 40 % | 47104033 |
5 | NC_005871 | TTGGA | 2 | 10 | 8544 | 8553 | 20 % | 40 % | 40 % | 0 % | 47104035 |
6 | NC_005871 | AAAAC | 2 | 10 | 8810 | 8819 | 80 % | 0 % | 0 % | 20 % | 47104035 |
7 | NC_005871 | AAAGA | 2 | 10 | 12485 | 12494 | 80 % | 0 % | 20 % | 0 % | 47104038 |
8 | NC_005871 | GAAAA | 2 | 10 | 13252 | 13261 | 80 % | 0 % | 20 % | 0 % | 47104039 |
9 | NC_005871 | CAGTA | 2 | 10 | 15798 | 15807 | 40 % | 20 % | 20 % | 20 % | 47104041 |
10 | NC_005871 | GCAAA | 2 | 10 | 18286 | 18295 | 60 % | 0 % | 20 % | 20 % | 47104042 |
11 | NC_005871 | CATGC | 2 | 10 | 20698 | 20707 | 20 % | 20 % | 20 % | 40 % | 47104044 |
12 | NC_005871 | CAAAC | 2 | 10 | 23240 | 23249 | 60 % | 0 % | 0 % | 40 % | 47104046 |
13 | NC_005871 | TTACC | 2 | 10 | 23542 | 23551 | 20 % | 40 % | 0 % | 40 % | 47104047 |
14 | NC_005871 | GGCCA | 2 | 10 | 26060 | 26069 | 20 % | 0 % | 40 % | 40 % | 47104047 |
15 | NC_005871 | TTGGC | 2 | 10 | 26769 | 26778 | 0 % | 40 % | 40 % | 20 % | 47104047 |
16 | NC_005871 | GACCA | 2 | 10 | 32177 | 32186 | 40 % | 0 % | 20 % | 40 % | 47104050 |
17 | NC_005871 | TTCTG | 2 | 10 | 34962 | 34971 | 0 % | 60 % | 20 % | 20 % | 47104052 |
18 | NC_005871 | TTTGG | 2 | 10 | 51580 | 51589 | 0 % | 60 % | 40 % | 0 % | 47104066 |
19 | NC_005871 | AATGA | 2 | 10 | 54364 | 54373 | 60 % | 20 % | 20 % | 0 % | 47104068 |
20 | NC_005871 | TACAT | 2 | 10 | 54530 | 54539 | 40 % | 40 % | 0 % | 20 % | 47104068 |
21 | NC_005871 | ACCAG | 2 | 10 | 55221 | 55230 | 40 % | 0 % | 20 % | 40 % | 47104068 |
22 | NC_005871 | GTTTC | 2 | 10 | 55379 | 55388 | 0 % | 60 % | 20 % | 20 % | 47104068 |
23 | NC_005871 | TATTT | 2 | 10 | 56946 | 56955 | 20 % | 80 % | 0 % | 0 % | 47104069 |
24 | NC_005871 | TTTGC | 2 | 10 | 58187 | 58196 | 0 % | 60 % | 20 % | 20 % | 47104070 |
25 | NC_005871 | GCTAG | 2 | 10 | 59138 | 59147 | 20 % | 20 % | 40 % | 20 % | 47104071 |
26 | NC_005871 | AAGAA | 2 | 10 | 64134 | 64143 | 80 % | 0 % | 20 % | 0 % | 47104077 |
27 | NC_005871 | AATGC | 2 | 10 | 64217 | 64226 | 40 % | 20 % | 20 % | 20 % | 47104077 |
28 | NC_005871 | ATCAA | 2 | 10 | 68880 | 68889 | 60 % | 20 % | 0 % | 20 % | 47104082 |
29 | NC_005871 | AAGTT | 2 | 10 | 69736 | 69745 | 40 % | 40 % | 20 % | 0 % | 47104082 |
30 | NC_005871 | GTAAT | 2 | 10 | 70474 | 70483 | 40 % | 40 % | 20 % | 0 % | 47104083 |
31 | NC_005871 | TATGC | 2 | 10 | 73800 | 73809 | 20 % | 40 % | 20 % | 20 % | 47104086 |
32 | NC_005871 | TAATT | 2 | 10 | 74002 | 74011 | 40 % | 60 % | 0 % | 0 % | 47104086 |
33 | NC_005871 | TCATG | 2 | 10 | 74968 | 74977 | 20 % | 40 % | 20 % | 20 % | 47104087 |
34 | NC_005871 | GAGCA | 2 | 10 | 76111 | 76120 | 40 % | 0 % | 40 % | 20 % | 47104089 |
35 | NC_005871 | CTGAA | 2 | 10 | 76298 | 76307 | 40 % | 20 % | 20 % | 20 % | 47104089 |
36 | NC_005871 | TCAAT | 2 | 10 | 77134 | 77143 | 40 % | 40 % | 0 % | 20 % | 47104090 |
37 | NC_005871 | TCATC | 2 | 10 | 77279 | 77288 | 20 % | 40 % | 0 % | 40 % | 47104090 |
38 | NC_005871 | TCAGA | 2 | 10 | 78190 | 78199 | 40 % | 20 % | 20 % | 20 % | 47104091 |
39 | NC_005871 | TTGAT | 2 | 10 | 79614 | 79623 | 20 % | 60 % | 20 % | 0 % | 47104092 |