MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Thermus thermophilus HB27 plasmid pTT27

Total Repeats: 20

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_005838	GGCCCT	2	12	17742	17753	0 %	16.67 %	33.33 %	50 %	Non-Coding
2	NC_005838	GCCCAG	2	12	27393	27404	16.67 %	0 %	33.33 %	50 %	Non-Coding
3	NC_005838	CTTCCC	2	12	81271	81282	0 %	33.33 %	0 %	66.67 %	Non-Coding
4	NC_005838	CTCCTT	2	12	90252	90263	0 %	50 %	0 %	50 %	Non-Coding
5	NC_005838	GTGGAG	2	12	90597	90608	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
6	NC_005838	AAGCGA	2	12	100589	100600	50 %	0 %	33.33 %	16.67 %	Non-Coding
7	NC_005838	GAGCGG	2	12	153971	153982	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
8	NC_005838	TTCCCC	2	12	154358	154369	0 %	33.33 %	0 %	66.67 %	Non-Coding
9	NC_005838	GCCTTC	2	12	155128	155139	0 %	33.33 %	16.67 %	50 %	Non-Coding
10	NC_005838	GCGGGG	2	12	156004	156015	0 %	0 %	83.33 %	16.67 %	Non-Coding
11	NC_005838	CCCCCA	2	12	164466	164477	16.67 %	0 %	0 %	83.33 %	Non-Coding
12	NC_005838	GCCCTC	2	12	183136	183147	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
13	NC_005838	CGCCTT	2	12	183447	183458	0 %	33.33 %	16.67 %	50 %	Non-Coding
14	NC_005838	ACCGCC	2	12	191924	191935	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
15	NC_005838	GCGCAC	2	12	192485	192496	16.67 %	0 %	33.33 %	50 %	Non-Coding
16	NC_005838	ACGGGG	2	12	200574	200585	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
17	NC_005838	CTACCC	2	12	201919	201930	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
18	NC_005838	GAGGAA	2	12	202163	202174	50 %	0 %	50 %	0 %	Non-Coding
19	NC_005838	GAAAGA	2	12	205373	205384	66.67 %	0 %	33.33 %	0 %	Non-Coding
20	NC_005838	TGGGCT	2	12	206716	206727	0 %	33.33 %	50 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.