MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome II

Total Repeats: 36

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_005824	TGGAAG	2	12	19357	19368	33.33 %	16.67 %	50 %	0 %	Non-Coding
2	NC_005824	TTCTCT	2	12	33600	33611	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_005824	AAAAAC	2	12	71751	71762	83.33 %	0 %	0 %	16.67 %	Non-Coding
4	NC_005824	TTTAAT	2	12	89460	89471	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_005824	AAATTT	2	12	99501	99512	50 %	50 %	0 %	0 %	Non-Coding
6	NC_005824	ATGAAT	2	12	104169	104180	50 %	33.33 %	16.67 %	0 %	Non-Coding
7	NC_005824	TTGTTT	2	12	106002	106013	0 %	83.33 %	16.67 %	0 %	Non-Coding
8	NC_005824	ATCTAT	2	12	114917	114928	33.33 %	50 %	0 %	16.67 %	Non-Coding
9	NC_005824	AGATCA	2	12	124092	124103	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
10	NC_005824	GTTTTT	2	12	124891	124902	0 %	83.33 %	16.67 %	0 %	Non-Coding
11	NC_005824	TAAAAA	2	12	128056	128067	83.33 %	16.67 %	0 %	0 %	Non-Coding
12	NC_005824	TCGGCC	2	12	179172	179183	0 %	16.67 %	33.33 %	50 %	Non-Coding
13	NC_005824	AAATCA	2	12	179357	179368	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
14	NC_005824	AGTCAA	2	12	207491	207502	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
15	NC_005824	TTAAAA	2	12	228158	228169	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_005824	ATCAAA	2	12	229956	229967	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
17	NC_005824	ACAAAA	2	12	230045	230056	83.33 %	0 %	0 %	16.67 %	Non-Coding
18	NC_005824	TTTGAT	2	12	231886	231897	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
19	NC_005824	GAGTTT	2	12	238207	238218	16.67 %	50 %	33.33 %	0 %	Non-Coding
20	NC_005824	AAACAA	2	12	246570	246581	83.33 %	0 %	0 %	16.67 %	Non-Coding
21	NC_005824	TGGTTA	2	12	271606	271617	16.67 %	50 %	33.33 %	0 %	Non-Coding
22	NC_005824	TATAAA	2	12	279368	279379	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_005824	GAAACA	2	12	282622	282633	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
24	NC_005824	GAAACA	2	12	290791	290802	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
25	NC_005824	AATATA	2	12	295577	295588	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_005824	GAAACA	2	12	298302	298313	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
27	NC_005824	CAAAAT	2	12	298495	298506	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
28	NC_005824	AAAATT	2	12	309147	309158	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_005824	TGCAAA	2	12	313458	313469	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
30	NC_005824	GAAATC	2	12	321970	321981	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
31	NC_005824	CCATTA	2	12	323369	323380	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_005824	TAATTT	2	12	328357	328368	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_005824	TTCCAC	2	12	330835	330846	16.67 %	33.33 %	0 %	50 %	Non-Coding
34	NC_005824	TAAAAT	2	12	337742	337753	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_005824	TGTTTC	2	12	338002	338013	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
36	NC_005824	ATTTTT	2	12	343066	343077	16.67 %	83.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.