Hexa-nucleotide Repeats of Yersinia pestis biovar Microtus str. 91001 plasmid pCD1
Total Repeats: 24
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_005813 | CAGGAG | 2 | 12 | 408 | 419 | 33.33 % | 0 % | 50 % | 16.67 % | 45478503 |
2 | NC_005813 | AACCGG | 2 | 12 | 5394 | 5405 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
3 | NC_005813 | AATCTT | 2 | 12 | 10011 | 10022 | 33.33 % | 50 % | 0 % | 16.67 % | 45478515 |
4 | NC_005813 | CATTCA | 2 | 12 | 12746 | 12757 | 33.33 % | 33.33 % | 0 % | 33.33 % | 45478518 |
5 | NC_005813 | TCAATT | 2 | 12 | 14575 | 14586 | 33.33 % | 50 % | 0 % | 16.67 % | 45478520 |
6 | NC_005813 | ATAACC | 2 | 12 | 15608 | 15619 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
7 | NC_005813 | GCAAAA | 2 | 12 | 17701 | 17712 | 66.67 % | 0 % | 16.67 % | 16.67 % | 45478525 |
8 | NC_005813 | AGTAAC | 2 | 12 | 23068 | 23079 | 50 % | 16.67 % | 16.67 % | 16.67 % | 45478532 |
9 | NC_005813 | ACGTTA | 2 | 12 | 23361 | 23372 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 45478533 |
10 | NC_005813 | AACCAA | 2 | 12 | 24862 | 24873 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
11 | NC_005813 | AGTTCT | 2 | 12 | 29816 | 29827 | 16.67 % | 50 % | 16.67 % | 16.67 % | 45478542 |
12 | NC_005813 | GTTCTT | 2 | 12 | 30944 | 30955 | 0 % | 66.67 % | 16.67 % | 16.67 % | 45478543 |
13 | NC_005813 | TCATCT | 2 | 12 | 30979 | 30990 | 16.67 % | 50 % | 0 % | 33.33 % | 45478543 |
14 | NC_005813 | GTAATT | 2 | 12 | 32848 | 32859 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
15 | NC_005813 | ATCTTG | 2 | 12 | 36282 | 36293 | 16.67 % | 50 % | 16.67 % | 16.67 % | 45478550 |
16 | NC_005813 | GTTTAA | 2 | 12 | 40621 | 40632 | 33.33 % | 50 % | 16.67 % | 0 % | 45478555 |
17 | NC_005813 | AAAAAT | 2 | 12 | 42390 | 42401 | 83.33 % | 16.67 % | 0 % | 0 % | 45478557 |
18 | NC_005813 | AAATGT | 2 | 12 | 47060 | 47071 | 50 % | 33.33 % | 16.67 % | 0 % | 45478563 |
19 | NC_005813 | TGGAAA | 2 | 12 | 50749 | 50760 | 50 % | 16.67 % | 33.33 % | 0 % | 45478566 |
20 | NC_005813 | GACATC | 2 | 12 | 52769 | 52780 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 229220788 |
21 | NC_005813 | ATAGAT | 2 | 12 | 56296 | 56307 | 50 % | 33.33 % | 16.67 % | 0 % | 45478572 |
22 | NC_005813 | CAATTG | 2 | 12 | 67824 | 67835 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
23 | NC_005813 | TTTCCA | 2 | 12 | 68903 | 68914 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
24 | NC_005813 | TGGAAA | 2 | 12 | 70053 | 70064 | 50 % | 16.67 % | 33.33 % | 0 % | 45478587 |