MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Anaplasma marginale str. St. Maries chromosome

Total Repeats: 35

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_004842	GAAGTA	2	12	24246	24257	50 %	16.67 %	33.33 %	0 %	Non-Coding
2	NC_004842	GAAGTA	2	12	33905	33916	50 %	16.67 %	33.33 %	0 %	Non-Coding
3	NC_004842	CTACTT	2	12	36189	36200	16.67 %	50 %	0 %	33.33 %	Non-Coding
4	NC_004842	TCTCCT	2	12	47323	47334	0 %	50 %	0 %	50 %	Non-Coding
5	NC_004842	CTACTT	2	12	47764	47775	16.67 %	50 %	0 %	33.33 %	Non-Coding
6	NC_004842	TGGCTG	2	12	126463	126474	0 %	33.33 %	50 %	16.67 %	Non-Coding
7	NC_004842	GTGCTG	2	12	134891	134902	0 %	33.33 %	50 %	16.67 %	Non-Coding
8	NC_004842	CTACTT	2	12	177332	177343	16.67 %	50 %	0 %	33.33 %	Non-Coding
9	NC_004842	TATAAT	2	12	190333	190344	50 %	50 %	0 %	0 %	Non-Coding
10	NC_004842	GCCGCG	2	12	251556	251567	0 %	0 %	50 %	50 %	Non-Coding
11	NC_004842	TGGGCT	2	12	284374	284385	0 %	33.33 %	50 %	16.67 %	Non-Coding
12	NC_004842	GGGTTT	2	12	323433	323444	0 %	50 %	50 %	0 %	Non-Coding
13	NC_004842	ATGCCC	2	12	334985	334996	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
14	NC_004842	TATAAT	2	12	404486	404497	50 %	50 %	0 %	0 %	Non-Coding
15	NC_004842	GCACCG	2	12	490712	490723	16.67 %	0 %	33.33 %	50 %	Non-Coding
16	NC_004842	TAAAAG	2	12	503503	503514	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
17	NC_004842	TAAAAG	2	12	505903	505914	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
18	NC_004842	TTGCTG	2	12	508084	508095	0 %	50 %	33.33 %	16.67 %	Non-Coding
19	NC_004842	TTGATG	2	12	658836	658847	16.67 %	50 %	33.33 %	0 %	Non-Coding
20	NC_004842	ACCTTA	2	12	658864	658875	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
21	NC_004842	CTACTT	2	12	662773	662784	16.67 %	50 %	0 %	33.33 %	Non-Coding
22	NC_004842	ACCCCT	2	12	781162	781173	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
23	NC_004842	CCAACC	2	12	794871	794882	33.33 %	0 %	0 %	66.67 %	Non-Coding
24	NC_004842	AAAAAG	2	12	849700	849711	83.33 %	0 %	16.67 %	0 %	Non-Coding
25	NC_004842	GAAGTA	2	12	901526	901537	50 %	16.67 %	33.33 %	0 %	Non-Coding
26	NC_004842	TGGGCG	2	12	901738	901749	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
27	NC_004842	CCTGTA	2	12	901760	901771	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
28	NC_004842	GTGGCG	2	12	914577	914588	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
29	NC_004842	GCGACA	2	12	918477	918488	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
30	NC_004842	TGCACA	2	12	937889	937900	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
31	NC_004842	ACACTT	2	12	956162	956173	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_004842	CTACTT	2	12	1113245	1113256	16.67 %	50 %	0 %	33.33 %	Non-Coding
33	NC_004842	TACTTT	2	12	1175403	1175414	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
34	NC_004842	GCACCA	2	12	1180212	1180223	33.33 %	0 %	16.67 %	50 %	Non-Coding
35	NC_004842	CCTCGC	2	12	1195878	1195889	0 %	16.67 %	16.67 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.