Hexa-nucleotide Repeats of Yersinia pestis KIM plasmid pMT-1
Total Repeats: 35
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_004838 | TATCCA | 2 | 12 | 1496 | 1507 | 33.33 % | 33.33 % | 0 % | 33.33 % | 31795334 |
2 | NC_004838 | ATAAGC | 2 | 12 | 4671 | 4682 | 50 % | 16.67 % | 16.67 % | 16.67 % | 31795337 |
3 | NC_004838 | ACCACA | 2 | 12 | 5572 | 5583 | 50 % | 0 % | 0 % | 50 % | 31795338 |
4 | NC_004838 | GCCACC | 2 | 12 | 14795 | 14806 | 16.67 % | 0 % | 16.67 % | 66.67 % | 31795353 |
5 | NC_004838 | CGGCGT | 2 | 12 | 18807 | 18818 | 0 % | 16.67 % | 50 % | 33.33 % | 31795358 |
6 | NC_004838 | GCAGCC | 2 | 12 | 21239 | 21250 | 16.67 % | 0 % | 33.33 % | 50 % | 31795361 |
7 | NC_004838 | ACCGTT | 2 | 12 | 24055 | 24066 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 31795363 |
8 | NC_004838 | CCGTAA | 2 | 12 | 25630 | 25641 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 31795365 |
9 | NC_004838 | TGGCGC | 2 | 12 | 26459 | 26470 | 0 % | 16.67 % | 50 % | 33.33 % | 31795367 |
10 | NC_004838 | ATCACT | 2 | 12 | 28737 | 28748 | 33.33 % | 33.33 % | 0 % | 33.33 % | 31795371 |
11 | NC_004838 | TGGGGA | 2 | 12 | 33708 | 33719 | 16.67 % | 16.67 % | 66.67 % | 0 % | 31795374 |
12 | NC_004838 | AACTCG | 2 | 12 | 37014 | 37025 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 31795378 |
13 | NC_004838 | CCGATA | 2 | 12 | 41014 | 41025 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 31795379 |
14 | NC_004838 | CTGGCA | 2 | 12 | 42569 | 42580 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 31795381 |
15 | NC_004838 | TTCAGC | 2 | 12 | 43065 | 43076 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 31795381 |
16 | NC_004838 | GCTCCT | 2 | 12 | 47917 | 47928 | 0 % | 33.33 % | 16.67 % | 50 % | 31795385 |
17 | NC_004838 | CATGTT | 2 | 12 | 56928 | 56939 | 16.67 % | 50 % | 16.67 % | 16.67 % | 31795399 |
18 | NC_004838 | CGCTTT | 2 | 12 | 60317 | 60328 | 0 % | 50 % | 16.67 % | 33.33 % | 31795403 |
19 | NC_004838 | ACCCCT | 2 | 12 | 62652 | 62663 | 16.67 % | 16.67 % | 0 % | 66.67 % | 39980774 |
20 | NC_004838 | GTTATT | 2 | 12 | 64880 | 64891 | 16.67 % | 66.67 % | 16.67 % | 0 % | 31795410 |
21 | NC_004838 | CCAGGA | 2 | 12 | 69378 | 69389 | 33.33 % | 0 % | 33.33 % | 33.33 % | 31795418 |
22 | NC_004838 | TCGGCT | 2 | 12 | 71220 | 71231 | 0 % | 33.33 % | 33.33 % | 33.33 % | 31795420 |
23 | NC_004838 | CAGGAG | 2 | 12 | 73184 | 73195 | 33.33 % | 0 % | 50 % | 16.67 % | 31795421 |
24 | NC_004838 | AAAGAA | 2 | 12 | 78576 | 78587 | 83.33 % | 0 % | 16.67 % | 0 % | 39980777 |
25 | NC_004838 | TGAATT | 2 | 12 | 81007 | 81018 | 33.33 % | 50 % | 16.67 % | 0 % | 31795427 |
26 | NC_004838 | CAATTA | 2 | 12 | 81879 | 81890 | 50 % | 33.33 % | 0 % | 16.67 % | 31795428 |
27 | NC_004838 | GTAACC | 2 | 12 | 82220 | 82231 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 31795428 |
28 | NC_004838 | TGGACG | 2 | 12 | 87678 | 87689 | 16.67 % | 16.67 % | 50 % | 16.67 % | 31795433 |
29 | NC_004838 | GCTGGC | 2 | 12 | 88219 | 88230 | 0 % | 16.67 % | 50 % | 33.33 % | 31795433 |
30 | NC_004838 | CTGGCG | 2 | 12 | 92620 | 92631 | 0 % | 16.67 % | 50 % | 33.33 % | 31795435 |
31 | NC_004838 | AACCCA | 2 | 12 | 93765 | 93776 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
32 | NC_004838 | TGGCGA | 2 | 12 | 96098 | 96109 | 16.67 % | 16.67 % | 50 % | 16.67 % | 31795439 |
33 | NC_004838 | CAAGCA | 2 | 12 | 96164 | 96175 | 50 % | 0 % | 16.67 % | 33.33 % | 31795439 |
34 | NC_004838 | GCACTG | 2 | 12 | 96928 | 96939 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 31795441 |
35 | NC_004838 | AACCCT | 2 | 12 | 99562 | 99573 | 33.33 % | 16.67 % | 0 % | 50 % | 31795443 |