Penta-nucleotide Coding Repeats of Yersinia pestis KIM plasmid pMT-1
Total Repeats: 55
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_004838 | GTTAA | 2 | 10 | 1042 | 1051 | 40 % | 40 % | 20 % | 0 % | 31795334 |
2 | NC_004838 | TACGT | 2 | 10 | 2713 | 2722 | 20 % | 40 % | 20 % | 20 % | 31795335 |
3 | NC_004838 | CGCTC | 2 | 10 | 2779 | 2788 | 0 % | 20 % | 20 % | 60 % | 31795335 |
4 | NC_004838 | CAATG | 2 | 10 | 8515 | 8524 | 40 % | 20 % | 20 % | 20 % | 31795341 |
5 | NC_004838 | CCAGT | 2 | 10 | 9202 | 9211 | 20 % | 20 % | 20 % | 40 % | 31795342 |
6 | NC_004838 | GGGGA | 2 | 10 | 11207 | 11216 | 20 % | 0 % | 80 % | 0 % | 31795346 |
7 | NC_004838 | AGGGG | 2 | 10 | 11355 | 11364 | 20 % | 0 % | 80 % | 0 % | 31795347 |
8 | NC_004838 | AATTT | 2 | 10 | 12467 | 12476 | 40 % | 60 % | 0 % | 0 % | 31795349 |
9 | NC_004838 | GGGCA | 2 | 10 | 13607 | 13616 | 20 % | 0 % | 60 % | 20 % | 39980767 |
10 | NC_004838 | CCGTT | 2 | 10 | 18780 | 18789 | 0 % | 40 % | 20 % | 40 % | 31795358 |
11 | NC_004838 | TTCCG | 2 | 10 | 18988 | 18997 | 0 % | 40 % | 20 % | 40 % | 31795358 |
12 | NC_004838 | CGAAG | 2 | 10 | 19872 | 19881 | 40 % | 0 % | 40 % | 20 % | 31795360 |
13 | NC_004838 | GCACT | 2 | 10 | 20805 | 20814 | 20 % | 20 % | 20 % | 40 % | 31795361 |
14 | NC_004838 | TGCCG | 2 | 10 | 25281 | 25290 | 0 % | 20 % | 40 % | 40 % | 31795365 |
15 | NC_004838 | TGTCG | 2 | 10 | 26528 | 26537 | 0 % | 40 % | 40 % | 20 % | 31795367 |
16 | NC_004838 | GTACC | 2 | 10 | 27095 | 27104 | 20 % | 20 % | 20 % | 40 % | 31795367 |
17 | NC_004838 | GTTCA | 2 | 10 | 28989 | 28998 | 20 % | 40 % | 20 % | 20 % | 31795371 |
18 | NC_004838 | CTGGT | 2 | 10 | 29200 | 29209 | 0 % | 40 % | 40 % | 20 % | 31795371 |
19 | NC_004838 | CATCC | 2 | 10 | 29557 | 29566 | 20 % | 20 % | 0 % | 60 % | 31795372 |
20 | NC_004838 | GCGCA | 2 | 10 | 34529 | 34538 | 20 % | 0 % | 40 % | 40 % | 31795374 |
21 | NC_004838 | GACAA | 2 | 10 | 40431 | 40440 | 60 % | 0 % | 20 % | 20 % | 31795379 |
22 | NC_004838 | CTCTG | 2 | 10 | 40829 | 40838 | 0 % | 40 % | 20 % | 40 % | 31795379 |
23 | NC_004838 | TTTGA | 2 | 10 | 46515 | 46524 | 20 % | 60 % | 20 % | 0 % | 31795384 |
24 | NC_004838 | GCGCT | 2 | 10 | 47153 | 47162 | 0 % | 20 % | 40 % | 40 % | 31795384 |
25 | NC_004838 | ACCTT | 2 | 10 | 47553 | 47562 | 20 % | 40 % | 0 % | 40 % | 31795385 |
26 | NC_004838 | CGAAC | 2 | 10 | 47902 | 47911 | 40 % | 0 % | 20 % | 40 % | 31795385 |
27 | NC_004838 | CGAAT | 2 | 10 | 48476 | 48485 | 40 % | 20 % | 20 % | 20 % | 31795386 |
28 | NC_004838 | TGCTC | 2 | 10 | 48512 | 48521 | 0 % | 40 % | 20 % | 40 % | 31795386 |
29 | NC_004838 | CGCAG | 2 | 10 | 48943 | 48952 | 20 % | 0 % | 40 % | 40 % | 31795388 |
30 | NC_004838 | ACAGC | 2 | 10 | 49060 | 49069 | 40 % | 0 % | 20 % | 40 % | 31795388 |
31 | NC_004838 | GGTGC | 2 | 10 | 49862 | 49871 | 0 % | 20 % | 60 % | 20 % | 31795390 |
32 | NC_004838 | AACAA | 2 | 10 | 55241 | 55250 | 80 % | 0 % | 0 % | 20 % | 39980772 |
33 | NC_004838 | AAAGA | 2 | 10 | 61921 | 61930 | 80 % | 0 % | 20 % | 0 % | 39980774 |
34 | NC_004838 | CGCTT | 2 | 10 | 64600 | 64609 | 0 % | 40 % | 20 % | 40 % | 31795410 |
35 | NC_004838 | TGATT | 2 | 10 | 65014 | 65023 | 20 % | 60 % | 20 % | 0 % | 31795410 |
36 | NC_004838 | CTGCG | 2 | 10 | 66545 | 66554 | 0 % | 20 % | 40 % | 40 % | 31795412 |
37 | NC_004838 | GGAAT | 2 | 10 | 67668 | 67677 | 40 % | 20 % | 40 % | 0 % | 39980775 |
38 | NC_004838 | CTCTA | 2 | 10 | 68944 | 68953 | 20 % | 40 % | 0 % | 40 % | 31795417 |
39 | NC_004838 | CCTCG | 2 | 10 | 71104 | 71113 | 0 % | 20 % | 20 % | 60 % | 31795420 |
40 | NC_004838 | ACGGC | 2 | 10 | 71541 | 71550 | 20 % | 0 % | 40 % | 40 % | 31795420 |
41 | NC_004838 | GTTCG | 2 | 10 | 73202 | 73211 | 0 % | 40 % | 40 % | 20 % | 31795421 |
42 | NC_004838 | AAGGT | 2 | 10 | 73551 | 73560 | 40 % | 20 % | 40 % | 0 % | 31795421 |
43 | NC_004838 | AGCGC | 2 | 10 | 73951 | 73960 | 20 % | 0 % | 40 % | 40 % | 31795422 |
44 | NC_004838 | TCAAA | 2 | 10 | 74589 | 74598 | 60 % | 20 % | 0 % | 20 % | 31795422 |
45 | NC_004838 | AAACC | 2 | 10 | 74902 | 74911 | 60 % | 0 % | 0 % | 40 % | 31795423 |
46 | NC_004838 | AAGCG | 2 | 10 | 76509 | 76518 | 40 % | 0 % | 40 % | 20 % | 31795424 |
47 | NC_004838 | TTTTA | 2 | 10 | 79527 | 79536 | 20 % | 80 % | 0 % | 0 % | 31795427 |
48 | NC_004838 | CAATT | 2 | 10 | 80604 | 80613 | 40 % | 40 % | 0 % | 20 % | 31795427 |
49 | NC_004838 | CTGAT | 2 | 10 | 84131 | 84140 | 20 % | 40 % | 20 % | 20 % | 31795430 |
50 | NC_004838 | CGGCG | 2 | 10 | 85213 | 85222 | 0 % | 0 % | 60 % | 40 % | 31795432 |
51 | NC_004838 | AGTTC | 2 | 10 | 86736 | 86745 | 20 % | 40 % | 20 % | 20 % | 31795432 |
52 | NC_004838 | CTGCG | 2 | 10 | 90324 | 90333 | 0 % | 20 % | 40 % | 40 % | 31795434 |
53 | NC_004838 | CCAGA | 2 | 10 | 92871 | 92880 | 40 % | 0 % | 20 % | 40 % | 31795435 |
54 | NC_004838 | ATCGC | 2 | 10 | 93415 | 93424 | 20 % | 20 % | 20 % | 40 % | 31795436 |
55 | NC_004838 | CGCTG | 2 | 10 | 99646 | 99655 | 0 % | 20 % | 40 % | 40 % | 31795444 |