Tetra-nucleotide Non-Coding Repeats of Shewanella oneidensis MR-1 plasmid megaplasmid
Total Repeats: 141
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_004349 | AGCG | 2 | 8 | 487 | 494 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
2 | NC_004349 | CATG | 2 | 8 | 1791 | 1798 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
3 | NC_004349 | GTTA | 2 | 8 | 1892 | 1899 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
4 | NC_004349 | CACT | 2 | 8 | 2177 | 2184 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
5 | NC_004349 | ATTA | 2 | 8 | 2561 | 2568 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
6 | NC_004349 | AACG | 2 | 8 | 6971 | 6978 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
7 | NC_004349 | AATT | 2 | 8 | 9368 | 9375 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
8 | NC_004349 | TAAT | 2 | 8 | 9414 | 9421 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
9 | NC_004349 | TGGG | 2 | 8 | 12047 | 12054 | 0 % | 25 % | 75 % | 0 % | Non-Coding |
10 | NC_004349 | CGGG | 2 | 8 | 12099 | 12106 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
11 | NC_004349 | GAAA | 2 | 8 | 17662 | 17669 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
12 | NC_004349 | AGGC | 2 | 8 | 17726 | 17733 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
13 | NC_004349 | AAGA | 2 | 8 | 17879 | 17886 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
14 | NC_004349 | CAAC | 2 | 8 | 18322 | 18329 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
15 | NC_004349 | ATTT | 2 | 8 | 18728 | 18735 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
16 | NC_004349 | TGTC | 2 | 8 | 22703 | 22710 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
17 | NC_004349 | TAAA | 2 | 8 | 24713 | 24720 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
18 | NC_004349 | ATAA | 2 | 8 | 27744 | 27751 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
19 | NC_004349 | TCGG | 2 | 8 | 28218 | 28225 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
20 | NC_004349 | GCAA | 2 | 8 | 28267 | 28274 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
21 | NC_004349 | ACCA | 2 | 8 | 32100 | 32107 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
22 | NC_004349 | TTAG | 2 | 8 | 37937 | 37944 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
23 | NC_004349 | ATGC | 2 | 8 | 38026 | 38033 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
24 | NC_004349 | TTCC | 2 | 8 | 38758 | 38765 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
25 | NC_004349 | TGAT | 2 | 8 | 42807 | 42814 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
26 | NC_004349 | AAAT | 2 | 8 | 43391 | 43398 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
27 | NC_004349 | ATTA | 2 | 8 | 43585 | 43592 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
28 | NC_004349 | TCTT | 2 | 8 | 43654 | 43661 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
29 | NC_004349 | TTCA | 2 | 8 | 44386 | 44393 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
30 | NC_004349 | GTAA | 2 | 8 | 44788 | 44795 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
31 | NC_004349 | TTGC | 2 | 8 | 46233 | 46240 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
32 | NC_004349 | GAAT | 2 | 8 | 46525 | 46532 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
33 | NC_004349 | ATTA | 2 | 8 | 48257 | 48264 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
34 | NC_004349 | CTAA | 2 | 8 | 48415 | 48422 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
35 | NC_004349 | GAAA | 2 | 8 | 48452 | 48459 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
36 | NC_004349 | ACTT | 2 | 8 | 49631 | 49638 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
37 | NC_004349 | TAGC | 2 | 8 | 49664 | 49671 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
38 | NC_004349 | TTGT | 2 | 8 | 49695 | 49702 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
39 | NC_004349 | TAGC | 2 | 8 | 49706 | 49713 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
40 | NC_004349 | TATC | 2 | 8 | 49714 | 49721 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
41 | NC_004349 | AGCT | 2 | 8 | 50801 | 50808 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
42 | NC_004349 | ATTA | 2 | 8 | 50817 | 50824 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
43 | NC_004349 | CTGG | 2 | 8 | 51518 | 51525 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
44 | NC_004349 | ACTG | 2 | 8 | 52190 | 52197 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
45 | NC_004349 | CATA | 2 | 8 | 52219 | 52226 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
46 | NC_004349 | CGGA | 2 | 8 | 52387 | 52394 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
47 | NC_004349 | AATT | 2 | 8 | 52664 | 52671 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
48 | NC_004349 | TAAT | 2 | 8 | 56322 | 56329 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
49 | NC_004349 | AAAT | 2 | 8 | 58689 | 58696 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
50 | NC_004349 | ATTT | 3 | 12 | 59583 | 59594 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
51 | NC_004349 | CATC | 2 | 8 | 60199 | 60206 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
52 | NC_004349 | AATT | 2 | 8 | 60252 | 60259 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
53 | NC_004349 | ATTA | 2 | 8 | 60274 | 60281 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
54 | NC_004349 | AATT | 2 | 8 | 61863 | 61870 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
55 | NC_004349 | TTAT | 2 | 8 | 62608 | 62615 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
56 | NC_004349 | GCCA | 2 | 8 | 65852 | 65859 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
57 | NC_004349 | GATA | 2 | 8 | 67179 | 67186 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
58 | NC_004349 | CTAT | 2 | 8 | 67911 | 67918 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
59 | NC_004349 | AAAT | 2 | 8 | 68764 | 68771 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
60 | NC_004349 | AAGA | 2 | 8 | 68983 | 68990 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
61 | NC_004349 | TTAC | 2 | 8 | 69008 | 69015 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
62 | NC_004349 | AACA | 2 | 8 | 71039 | 71046 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
63 | NC_004349 | CCAG | 2 | 8 | 71167 | 71174 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
64 | NC_004349 | TTCA | 2 | 8 | 71212 | 71219 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
65 | NC_004349 | GTTG | 2 | 8 | 71318 | 71325 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
66 | NC_004349 | TGCA | 2 | 8 | 71479 | 71486 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
67 | NC_004349 | ATTG | 2 | 8 | 71612 | 71619 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
68 | NC_004349 | GAAT | 2 | 8 | 71924 | 71931 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
69 | NC_004349 | GAAC | 2 | 8 | 73075 | 73082 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
70 | NC_004349 | ATTT | 2 | 8 | 76975 | 76982 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
71 | NC_004349 | AGAC | 2 | 8 | 79490 | 79497 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
72 | NC_004349 | AAAT | 2 | 8 | 81740 | 81747 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
73 | NC_004349 | ACTG | 2 | 8 | 82507 | 82514 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
74 | NC_004349 | CATA | 2 | 8 | 82536 | 82543 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
75 | NC_004349 | CGGA | 2 | 8 | 82704 | 82711 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
76 | NC_004349 | AACA | 2 | 8 | 82873 | 82880 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
77 | NC_004349 | CTGG | 2 | 8 | 85042 | 85049 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
78 | NC_004349 | TTAT | 2 | 8 | 87363 | 87370 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
79 | NC_004349 | TAAT | 2 | 8 | 87399 | 87406 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
80 | NC_004349 | TGTC | 2 | 8 | 87442 | 87449 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
81 | NC_004349 | TAAT | 2 | 8 | 87577 | 87584 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
82 | NC_004349 | AGGC | 2 | 8 | 87653 | 87660 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
83 | NC_004349 | CAAA | 2 | 8 | 87681 | 87688 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
84 | NC_004349 | GATG | 2 | 8 | 88527 | 88534 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
85 | NC_004349 | ACTT | 2 | 8 | 89926 | 89933 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
86 | NC_004349 | TCAT | 2 | 8 | 90059 | 90066 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
87 | NC_004349 | ACTG | 2 | 8 | 98914 | 98921 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
88 | NC_004349 | TGAT | 2 | 8 | 98928 | 98935 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
89 | NC_004349 | GGAA | 2 | 8 | 106137 | 106144 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
90 | NC_004349 | GCTC | 2 | 8 | 106203 | 106210 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
91 | NC_004349 | CAAG | 2 | 8 | 106342 | 106349 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
92 | NC_004349 | ACTG | 2 | 8 | 106399 | 106406 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
93 | NC_004349 | GACA | 2 | 8 | 107598 | 107605 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
94 | NC_004349 | AAAC | 2 | 8 | 107714 | 107721 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
95 | NC_004349 | ACCC | 2 | 8 | 107743 | 107750 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
96 | NC_004349 | AAAT | 2 | 8 | 108938 | 108945 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
97 | NC_004349 | TTAA | 2 | 8 | 108991 | 108998 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
98 | NC_004349 | ACAA | 2 | 8 | 109100 | 109107 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
99 | NC_004349 | ATTA | 2 | 8 | 109988 | 109995 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
100 | NC_004349 | AAAC | 2 | 8 | 110603 | 110610 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
101 | NC_004349 | TTCA | 2 | 8 | 110856 | 110863 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
102 | NC_004349 | GTTG | 2 | 8 | 111190 | 111197 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
103 | NC_004349 | GATA | 2 | 8 | 112555 | 112562 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
104 | NC_004349 | TTAG | 2 | 8 | 113093 | 113100 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
105 | NC_004349 | AACT | 2 | 8 | 118134 | 118141 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
106 | NC_004349 | TGAT | 2 | 8 | 118291 | 118298 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
107 | NC_004349 | ATCA | 2 | 8 | 118356 | 118363 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
108 | NC_004349 | TTTA | 2 | 8 | 118666 | 118673 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
109 | NC_004349 | CTCC | 2 | 8 | 118944 | 118951 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
110 | NC_004349 | CCTC | 2 | 8 | 118952 | 118959 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
111 | NC_004349 | ATTT | 2 | 8 | 118977 | 118984 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
112 | NC_004349 | TACC | 2 | 8 | 119427 | 119434 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
113 | NC_004349 | AATC | 2 | 8 | 119937 | 119944 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
114 | NC_004349 | AATT | 2 | 8 | 120042 | 120049 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
115 | NC_004349 | TGAT | 2 | 8 | 121825 | 121832 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
116 | NC_004349 | GGCA | 2 | 8 | 122123 | 122130 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
117 | NC_004349 | TCGG | 2 | 8 | 122502 | 122509 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
118 | NC_004349 | GCGT | 2 | 8 | 122664 | 122671 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
119 | NC_004349 | GTAG | 2 | 8 | 122876 | 122883 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
120 | NC_004349 | TGGA | 2 | 8 | 123425 | 123432 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
121 | NC_004349 | CAGT | 2 | 8 | 123503 | 123510 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
122 | NC_004349 | GTCG | 2 | 8 | 124294 | 124301 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
123 | NC_004349 | GCTA | 2 | 8 | 124454 | 124461 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
124 | NC_004349 | GCTG | 2 | 8 | 124889 | 124896 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
125 | NC_004349 | AGTT | 2 | 8 | 130691 | 130698 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
126 | NC_004349 | GACA | 2 | 8 | 131928 | 131935 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
127 | NC_004349 | TTTC | 2 | 8 | 134284 | 134291 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
128 | NC_004349 | TTCC | 2 | 8 | 134387 | 134394 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
129 | NC_004349 | AGAC | 2 | 8 | 136353 | 136360 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
130 | NC_004349 | ATTA | 2 | 8 | 147207 | 147214 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
131 | NC_004349 | TCAG | 2 | 8 | 148012 | 148019 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
132 | NC_004349 | ATTG | 2 | 8 | 150253 | 150260 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
133 | NC_004349 | ACTT | 2 | 8 | 151270 | 151277 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
134 | NC_004349 | ATGA | 2 | 8 | 151543 | 151550 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
135 | NC_004349 | CATA | 2 | 8 | 151597 | 151604 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
136 | NC_004349 | CTTT | 2 | 8 | 151810 | 151817 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
137 | NC_004349 | ATTG | 2 | 8 | 151959 | 151966 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
138 | NC_004349 | CATC | 2 | 8 | 152016 | 152023 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
139 | NC_004349 | CTGT | 2 | 8 | 152588 | 152595 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
140 | NC_004349 | TTTA | 2 | 8 | 154010 | 154017 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
141 | NC_004349 | GAGC | 2 | 8 | 161476 | 161483 | 25 % | 0 % | 50 % | 25 % | Non-Coding |