MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Brucella suis 1330 chromosome II

Total Repeats: 46

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_004311	GATGCC	2	12	145159	145170	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
2	NC_004311	GAAAAG	2	12	168803	168814	66.67 %	0 %	33.33 %	0 %	Non-Coding
3	NC_004311	TGTCAG	2	12	175614	175625	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
4	NC_004311	CGCAAG	2	12	193432	193443	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
5	NC_004311	GGGATT	2	12	217548	217559	16.67 %	33.33 %	50 %	0 %	Non-Coding
6	NC_004311	TTCACA	2	12	254997	255008	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_004311	TGGCGC	2	12	318500	318511	0 %	16.67 %	50 %	33.33 %	Non-Coding
8	NC_004311	GATATC	2	12	318794	318805	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
9	NC_004311	TGGCTG	2	12	318931	318942	0 %	33.33 %	50 %	16.67 %	Non-Coding
10	NC_004311	GAAGGA	2	12	322220	322231	50 %	0 %	50 %	0 %	Non-Coding
11	NC_004311	ACGGCA	2	12	375983	375994	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_004311	GGGTGA	2	12	396520	396531	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
13	NC_004311	AAATAA	2	12	398395	398406	83.33 %	16.67 %	0 %	0 %	Non-Coding
14	NC_004311	GCGCAG	2	12	456179	456190	16.67 %	0 %	50 %	33.33 %	Non-Coding
15	NC_004311	TGAAAA	2	12	528222	528233	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
16	NC_004311	GAGCTA	2	12	538986	538997	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
17	NC_004311	TCAAAA	2	12	539228	539239	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
18	NC_004311	GCAGCC	2	12	613820	613831	16.67 %	0 %	33.33 %	50 %	Non-Coding
19	NC_004311	CCGATC	2	12	645703	645714	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
20	NC_004311	GCCAAG	2	12	648042	648053	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_004311	CCTCGC	2	12	669331	669342	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
22	NC_004311	CGCTGG	2	12	669699	669710	0 %	16.67 %	50 %	33.33 %	Non-Coding
23	NC_004311	TCACAA	2	12	685547	685558	50 %	16.67 %	0 %	33.33 %	Non-Coding
24	NC_004311	ACGGCG	2	12	693053	693064	16.67 %	0 %	50 %	33.33 %	Non-Coding
25	NC_004311	AAAAGG	2	12	707219	707230	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_004311	CTCCTT	3	18	722814	722831	0 %	50 %	0 %	50 %	Non-Coding
27	NC_004311	GCCTTT	2	12	742621	742632	0 %	50 %	16.67 %	33.33 %	Non-Coding
28	NC_004311	AAAGGA	2	12	747647	747658	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_004311	GCTGAT	2	12	755658	755669	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
30	NC_004311	GAATCG	2	12	760707	760718	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
31	NC_004311	GCACCT	2	12	760738	760749	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
32	NC_004311	CCAGCG	2	12	764754	764765	16.67 %	0 %	33.33 %	50 %	Non-Coding
33	NC_004311	TGACCG	2	12	801034	801045	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
34	NC_004311	TTGTCG	2	12	801279	801290	0 %	50 %	33.33 %	16.67 %	Non-Coding
35	NC_004311	ATATGC	2	12	802460	802471	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
36	NC_004311	CGCTTG	2	12	840218	840229	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_004311	TTATGG	2	12	891915	891926	16.67 %	50 %	33.33 %	0 %	Non-Coding
38	NC_004311	ATAGCC	2	12	964168	964179	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
39	NC_004311	CGGAAA	2	12	1027341	1027352	50 %	0 %	33.33 %	16.67 %	Non-Coding
40	NC_004311	CCGGAG	2	12	1087238	1087249	16.67 %	0 %	50 %	33.33 %	Non-Coding
41	NC_004311	CCGGAA	2	12	1094155	1094166	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
42	NC_004311	CTGCCG	2	12	1110151	1110162	0 %	16.67 %	33.33 %	50 %	Non-Coding
43	NC_004311	AAATCG	2	12	1157656	1157667	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
44	NC_004311	GCTGAT	2	12	1194778	1194789	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
45	NC_004311	TCGCCA	2	12	1198345	1198356	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
46	NC_004311	GAGGAA	2	12	1207365	1207376	50 %	0 %	50 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.