MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Brucella suis 1330 chromosome I

Total Repeats: 78

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_004310	GCTGCC	2	12	18960	18971	0 %	16.67 %	33.33 %	50 %	Non-Coding
2	NC_004310	ACGGTT	2	12	34841	34852	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
3	NC_004310	CCTGGC	2	12	81358	81369	0 %	16.67 %	33.33 %	50 %	Non-Coding
4	NC_004310	TTTTGC	2	12	94511	94522	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
5	NC_004310	GCTTTT	2	12	103289	103300	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
6	NC_004310	CTGGCG	2	12	146718	146729	0 %	16.67 %	50 %	33.33 %	Non-Coding
7	NC_004310	GCCGAG	2	12	162546	162557	16.67 %	0 %	50 %	33.33 %	Non-Coding
8	NC_004310	GGGGAA	2	12	169759	169770	33.33 %	0 %	66.67 %	0 %	Non-Coding
9	NC_004310	TCTGGC	2	12	186249	186260	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
10	NC_004310	CCAGTG	2	12	209147	209158	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
11	NC_004310	TTCCGA	2	12	218473	218484	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
12	NC_004310	CTGATG	2	12	275446	275457	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
13	NC_004310	GGCACA	2	12	285866	285877	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
14	NC_004310	CTGAAA	2	12	331604	331615	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
15	NC_004310	CTGTCT	2	12	342378	342389	0 %	50 %	16.67 %	33.33 %	Non-Coding
16	NC_004310	TTGCCT	2	12	342683	342694	0 %	50 %	16.67 %	33.33 %	Non-Coding
17	NC_004310	TCGATA	2	12	425037	425048	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
18	NC_004310	TTTAAC	2	12	433026	433037	33.33 %	50 %	0 %	16.67 %	Non-Coding
19	NC_004310	CGTTTT	2	12	506726	506737	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
20	NC_004310	ATGACC	2	12	515657	515668	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
21	NC_004310	ACGGTC	2	12	526826	526837	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
22	NC_004310	TTACGT	2	12	557116	557127	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
23	NC_004310	CAGTTC	2	12	588941	588952	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
24	NC_004310	GAATAT	2	12	717425	717436	50 %	33.33 %	16.67 %	0 %	Non-Coding
25	NC_004310	CGGGAT	2	12	729903	729914	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
26	NC_004310	ATTGAA	2	12	752204	752215	50 %	33.33 %	16.67 %	0 %	Non-Coding
27	NC_004310	CTTTTC	2	12	768190	768201	0 %	66.67 %	0 %	33.33 %	Non-Coding
28	NC_004310	TCGCGC	2	12	808023	808034	0 %	16.67 %	33.33 %	50 %	Non-Coding
29	NC_004310	GGCGTT	2	12	836573	836584	0 %	33.33 %	50 %	16.67 %	Non-Coding
30	NC_004310	GAAATT	2	12	900067	900078	50 %	33.33 %	16.67 %	0 %	Non-Coding
31	NC_004310	TGCCGG	2	12	980234	980245	0 %	16.67 %	50 %	33.33 %	Non-Coding
32	NC_004310	GCTGAT	2	12	998351	998362	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
33	NC_004310	TTTCCT	2	12	1009698	1009709	0 %	66.67 %	0 %	33.33 %	Non-Coding
34	NC_004310	GGATGG	2	12	1009878	1009889	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
35	NC_004310	CGCCAG	2	12	1010271	1010282	16.67 %	0 %	33.33 %	50 %	Non-Coding
36	NC_004310	TATTTT	2	12	1017713	1017724	16.67 %	83.33 %	0 %	0 %	Non-Coding
37	NC_004310	TTTTCC	2	12	1142303	1142314	0 %	66.67 %	0 %	33.33 %	Non-Coding
38	NC_004310	CAAAAA	2	12	1180027	1180038	83.33 %	0 %	0 %	16.67 %	Non-Coding
39	NC_004310	TGAATT	2	12	1235600	1235611	33.33 %	50 %	16.67 %	0 %	Non-Coding
40	NC_004310	CAGCGC	2	12	1273000	1273011	16.67 %	0 %	33.33 %	50 %	Non-Coding
41	NC_004310	CGGGTT	2	12	1273067	1273078	0 %	33.33 %	50 %	16.67 %	Non-Coding
42	NC_004310	GCCTGC	2	12	1280194	1280205	0 %	16.67 %	33.33 %	50 %	Non-Coding
43	NC_004310	TCAATT	2	12	1283706	1283717	33.33 %	50 %	0 %	16.67 %	Non-Coding
44	NC_004310	CGTTTC	2	12	1292572	1292583	0 %	50 %	16.67 %	33.33 %	Non-Coding
45	NC_004310	CACCGC	2	12	1293625	1293636	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
46	NC_004310	AAAACA	2	12	1293814	1293825	83.33 %	0 %	0 %	16.67 %	Non-Coding
47	NC_004310	AAAGCG	2	12	1332632	1332643	50 %	0 %	33.33 %	16.67 %	Non-Coding
48	NC_004310	ATAGCC	2	12	1332882	1332893	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
49	NC_004310	CCGCGC	2	12	1384442	1384453	0 %	0 %	33.33 %	66.67 %	Non-Coding
50	NC_004310	GTAAAA	2	12	1402667	1402678	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
51	NC_004310	GCATTT	2	12	1408642	1408653	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
52	NC_004310	GCGCAT	2	12	1426740	1426751	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
53	NC_004310	CATCGG	2	12	1434281	1434292	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
54	NC_004310	ATGCCA	2	12	1436696	1436707	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
55	NC_004310	AAGGAA	2	12	1468964	1468975	66.67 %	0 %	33.33 %	0 %	Non-Coding
56	NC_004310	GCTCTG	2	12	1471042	1471053	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
57	NC_004310	AAAAGC	2	12	1543572	1543583	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
58	NC_004310	TGAAAA	2	12	1573494	1573505	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
59	NC_004310	TCGCCG	2	12	1575742	1575753	0 %	16.67 %	33.33 %	50 %	Non-Coding
60	NC_004310	TGGAGG	2	12	1583620	1583631	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
61	NC_004310	CTGCCG	2	12	1590612	1590623	0 %	16.67 %	33.33 %	50 %	Non-Coding
62	NC_004310	GCATCC	2	12	1615829	1615840	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
63	NC_004310	GGAGCC	2	12	1615861	1615872	16.67 %	0 %	50 %	33.33 %	Non-Coding
64	NC_004310	AATGCC	2	12	1650286	1650297	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
65	NC_004310	CGACCA	2	12	1660389	1660400	33.33 %	0 %	16.67 %	50 %	Non-Coding
66	NC_004310	CTGGCG	2	12	1698963	1698974	0 %	16.67 %	50 %	33.33 %	Non-Coding
67	NC_004310	TTGCGG	2	12	1698988	1698999	0 %	33.33 %	50 %	16.67 %	Non-Coding
68	NC_004310	ATGCCG	2	12	1708983	1708994	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
69	NC_004310	GCTTCT	2	12	1709311	1709322	0 %	50 %	16.67 %	33.33 %	Non-Coding
70	NC_004310	TAAAAA	2	12	1778810	1778821	83.33 %	16.67 %	0 %	0 %	Non-Coding
71	NC_004310	CTGCCG	2	12	1795674	1795685	0 %	16.67 %	33.33 %	50 %	Non-Coding
72	NC_004310	CGGCTG	2	12	1827508	1827519	0 %	16.67 %	50 %	33.33 %	Non-Coding
73	NC_004310	AGAAAC	2	12	1841989	1842000	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
74	NC_004310	AACTCA	2	12	1858122	1858133	50 %	16.67 %	0 %	33.33 %	Non-Coding
75	NC_004310	GAAGCC	2	12	1897379	1897390	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
76	NC_004310	TTCTTT	2	12	2062254	2062265	0 %	83.33 %	0 %	16.67 %	Non-Coding
77	NC_004310	GGAAAC	2	12	2086264	2086275	50 %	0 %	33.33 %	16.67 %	Non-Coding
78	NC_004310	TCTTTG	2	12	2099997	2100008	0 %	66.67 %	16.67 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.