Hexa-nucleotide Coding Repeats of Rhizobium etli CFN 42 symbiotic plasmid p42d
Total Repeats: 134
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_004041 | GGCAAT | 2 | 12 | 4552 | 4563 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 21492960 |
2 | NC_004041 | CAGTGC | 2 | 12 | 18408 | 18419 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492952 |
3 | NC_004041 | GCGTCG | 2 | 12 | 20885 | 20896 | 0 % | 16.67 % | 50 % | 33.33 % | 89255300 |
4 | NC_004041 | GCATCG | 2 | 12 | 25451 | 25462 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 89255302 |
5 | NC_004041 | CGCCGA | 2 | 12 | 25872 | 25883 | 16.67 % | 0 % | 33.33 % | 50 % | 89255302 |
6 | NC_004041 | CCGGTG | 2 | 12 | 27818 | 27829 | 0 % | 16.67 % | 50 % | 33.33 % | 21492940 |
7 | NC_004041 | GCGGAA | 2 | 12 | 31421 | 31432 | 33.33 % | 0 % | 50 % | 16.67 % | 21492936 |
8 | NC_004041 | CATCTT | 2 | 12 | 33239 | 33250 | 16.67 % | 50 % | 0 % | 33.33 % | 21492934 |
9 | NC_004041 | GCGTCG | 2 | 12 | 41694 | 41705 | 0 % | 16.67 % | 50 % | 33.33 % | 89255311 |
10 | NC_004041 | TCGGTA | 2 | 12 | 42569 | 42580 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 21492924 |
11 | NC_004041 | CGTTTT | 2 | 12 | 43967 | 43978 | 0 % | 66.67 % | 16.67 % | 16.67 % | 89255312 |
12 | NC_004041 | AGAGTG | 2 | 12 | 44465 | 44476 | 33.33 % | 16.67 % | 50 % | 0 % | 21492922 |
13 | NC_004041 | CATTGC | 2 | 12 | 45279 | 45290 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 21492921 |
14 | NC_004041 | TGCGCT | 2 | 12 | 45617 | 45628 | 0 % | 33.33 % | 33.33 % | 33.33 % | 21492921 |
15 | NC_004041 | ATGACC | 2 | 12 | 45817 | 45828 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 21492921 |
16 | NC_004041 | TAGGGA | 2 | 12 | 47394 | 47405 | 33.33 % | 16.67 % | 50 % | 0 % | 21492919 |
17 | NC_004041 | GTGACA | 2 | 12 | 49421 | 49432 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 21492919 |
18 | NC_004041 | GTTCGC | 2 | 12 | 51605 | 51616 | 0 % | 33.33 % | 33.33 % | 33.33 % | 89255314 |
19 | NC_004041 | AAGGAC | 2 | 12 | 60065 | 60076 | 50 % | 0 % | 33.33 % | 16.67 % | 21492910 |
20 | NC_004041 | GCTCGG | 2 | 12 | 60769 | 60780 | 0 % | 16.67 % | 50 % | 33.33 % | 21492910 |
21 | NC_004041 | ATCGGC | 2 | 12 | 61010 | 61021 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492910 |
22 | NC_004041 | GCATCG | 2 | 12 | 61857 | 61868 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492910 |
23 | NC_004041 | ATCGGC | 2 | 12 | 67330 | 67341 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492904 |
24 | NC_004041 | AGCCGG | 2 | 12 | 67367 | 67378 | 16.67 % | 0 % | 50 % | 33.33 % | 21492904 |
25 | NC_004041 | TCGCCT | 2 | 12 | 69175 | 69186 | 0 % | 33.33 % | 16.67 % | 50 % | 21492902 |
26 | NC_004041 | TGCCGT | 2 | 12 | 72744 | 72755 | 0 % | 33.33 % | 33.33 % | 33.33 % | 21492899 |
27 | NC_004041 | ATGGCG | 2 | 12 | 73517 | 73528 | 16.67 % | 16.67 % | 50 % | 16.67 % | 21492899 |
28 | NC_004041 | TGGTGC | 2 | 12 | 75456 | 75467 | 0 % | 33.33 % | 50 % | 16.67 % | 21492896 |
29 | NC_004041 | CGGCGA | 2 | 12 | 85958 | 85969 | 16.67 % | 0 % | 50 % | 33.33 % | 21492885 |
30 | NC_004041 | GGCGAC | 2 | 12 | 88488 | 88499 | 16.67 % | 0 % | 50 % | 33.33 % | 89255324 |
31 | NC_004041 | GGCAAC | 2 | 12 | 91893 | 91904 | 33.33 % | 0 % | 33.33 % | 33.33 % | 89255325 |
32 | NC_004041 | CGACGT | 2 | 12 | 93007 | 93018 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492880 |
33 | NC_004041 | TATCTC | 2 | 12 | 96562 | 96573 | 16.67 % | 50 % | 0 % | 33.33 % | 21492875 |
34 | NC_004041 | ACGTCG | 2 | 12 | 96974 | 96985 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492875 |
35 | NC_004041 | TTCGAT | 2 | 12 | 99537 | 99548 | 16.67 % | 50 % | 16.67 % | 16.67 % | 89255328 |
36 | NC_004041 | GGGCAG | 2 | 12 | 99588 | 99599 | 16.67 % | 0 % | 66.67 % | 16.67 % | 89255328 |
37 | NC_004041 | TTGCTG | 2 | 12 | 100772 | 100783 | 0 % | 50 % | 33.33 % | 16.67 % | 89255329 |
38 | NC_004041 | GAGACG | 2 | 12 | 110400 | 110411 | 33.33 % | 0 % | 50 % | 16.67 % | 21492863 |
39 | NC_004041 | CCGCGC | 2 | 12 | 112831 | 112842 | 0 % | 0 % | 33.33 % | 66.67 % | 21492860 |
40 | NC_004041 | CGGATC | 2 | 12 | 113099 | 113110 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492860 |
41 | NC_004041 | GAACGC | 2 | 12 | 117256 | 117267 | 33.33 % | 0 % | 33.33 % | 33.33 % | 89255332 |
42 | NC_004041 | ACGGTC | 2 | 12 | 117571 | 117582 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 89255332 |
43 | NC_004041 | CGGAGG | 2 | 12 | 121016 | 121027 | 16.67 % | 0 % | 66.67 % | 16.67 % | 21492856 |
44 | NC_004041 | ATCGAA | 2 | 12 | 122170 | 122181 | 50 % | 16.67 % | 16.67 % | 16.67 % | 21492856 |
45 | NC_004041 | ATTTCA | 2 | 12 | 123424 | 123435 | 33.33 % | 50 % | 0 % | 16.67 % | 89255333 |
46 | NC_004041 | AGATGC | 2 | 12 | 123849 | 123860 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 21492854 |
47 | NC_004041 | AGGTTG | 2 | 12 | 124101 | 124112 | 16.67 % | 33.33 % | 50 % | 0 % | 21492854 |
48 | NC_004041 | CAACGT | 2 | 12 | 127548 | 127559 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 21492851 |
49 | NC_004041 | TGCCGC | 2 | 12 | 130377 | 130388 | 0 % | 16.67 % | 33.33 % | 50 % | 89255335 |
50 | NC_004041 | CAAGCT | 2 | 12 | 131663 | 131674 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 89255338 |
51 | NC_004041 | GAAATG | 2 | 12 | 132036 | 132047 | 50 % | 16.67 % | 33.33 % | 0 % | 89255338 |
52 | NC_004041 | TCAAAG | 2 | 12 | 132160 | 132171 | 50 % | 16.67 % | 16.67 % | 16.67 % | 89255338 |
53 | NC_004041 | GATCGA | 2 | 12 | 140273 | 140284 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 21492838 |
54 | NC_004041 | CGCGCT | 2 | 12 | 145235 | 145246 | 0 % | 16.67 % | 33.33 % | 50 % | 21492833 |
55 | NC_004041 | GGTTGC | 2 | 12 | 147486 | 147497 | 0 % | 33.33 % | 50 % | 16.67 % | 89255343 |
56 | NC_004041 | TTCGCG | 2 | 12 | 147637 | 147648 | 0 % | 33.33 % | 33.33 % | 33.33 % | 89255343 |
57 | NC_004041 | GGCGTC | 2 | 12 | 148610 | 148621 | 0 % | 16.67 % | 50 % | 33.33 % | 89255344 |
58 | NC_004041 | TTGGCA | 2 | 12 | 148806 | 148817 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 89255344 |
59 | NC_004041 | AAATCG | 2 | 12 | 149596 | 149607 | 50 % | 16.67 % | 16.67 % | 16.67 % | 21492829 |
60 | NC_004041 | GAACGA | 2 | 12 | 160426 | 160437 | 50 % | 0 % | 33.33 % | 16.67 % | 21492822 |
61 | NC_004041 | GGCCAC | 2 | 12 | 162194 | 162205 | 16.67 % | 0 % | 33.33 % | 50 % | 21492819 |
62 | NC_004041 | CGGGCA | 2 | 12 | 164523 | 164534 | 16.67 % | 0 % | 50 % | 33.33 % | 21492816 |
63 | NC_004041 | ATCGGC | 2 | 12 | 164966 | 164977 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492816 |
64 | NC_004041 | CCAGAA | 2 | 12 | 165975 | 165986 | 50 % | 0 % | 16.67 % | 33.33 % | 21492815 |
65 | NC_004041 | CTACGG | 2 | 12 | 167302 | 167313 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492814 |
66 | NC_004041 | GCGAGG | 2 | 12 | 168078 | 168089 | 16.67 % | 0 % | 66.67 % | 16.67 % | 89255350 |
67 | NC_004041 | CAGGAT | 2 | 12 | 169671 | 169682 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 21492810 |
68 | NC_004041 | CATCGG | 2 | 12 | 171889 | 171900 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 89255351 |
69 | NC_004041 | CGATGA | 2 | 12 | 173411 | 173422 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 89255352 |
70 | NC_004041 | CAGTTC | 2 | 12 | 173448 | 173459 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 89255352 |
71 | NC_004041 | GGACCG | 2 | 12 | 173602 | 173613 | 16.67 % | 0 % | 50 % | 33.33 % | 89255352 |
72 | NC_004041 | CGAGAT | 2 | 12 | 179378 | 179389 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 21492799 |
73 | NC_004041 | ACATCA | 2 | 12 | 180465 | 180476 | 50 % | 16.67 % | 0 % | 33.33 % | 21492796 |
74 | NC_004041 | ATCTCC | 2 | 12 | 182357 | 182368 | 16.67 % | 33.33 % | 0 % | 50 % | 21492794 |
75 | NC_004041 | GCCGGC | 2 | 12 | 183918 | 183929 | 0 % | 0 % | 50 % | 50 % | 21492793 |
76 | NC_004041 | CGAGGA | 2 | 12 | 185102 | 185113 | 33.33 % | 0 % | 50 % | 16.67 % | 21492793 |
77 | NC_004041 | GGGACG | 2 | 12 | 186214 | 186225 | 16.67 % | 0 % | 66.67 % | 16.67 % | 21492793 |
78 | NC_004041 | ATCGCC | 2 | 12 | 190114 | 190125 | 16.67 % | 16.67 % | 16.67 % | 50 % | 21492790 |
79 | NC_004041 | TTCTCG | 2 | 12 | 190909 | 190920 | 0 % | 50 % | 16.67 % | 33.33 % | 89255357 |
80 | NC_004041 | CGAGAT | 2 | 12 | 195472 | 195483 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 21492785 |
81 | NC_004041 | GGAATG | 2 | 12 | 211244 | 211255 | 33.33 % | 16.67 % | 50 % | 0 % | 21492770 |
82 | NC_004041 | CGCTTG | 2 | 12 | 212898 | 212909 | 0 % | 33.33 % | 33.33 % | 33.33 % | 21492768 |
83 | NC_004041 | GAAATG | 2 | 12 | 214301 | 214312 | 50 % | 16.67 % | 33.33 % | 0 % | 21492765 |
84 | NC_004041 | GTCCGG | 2 | 12 | 223296 | 223307 | 0 % | 16.67 % | 50 % | 33.33 % | 89255365 |
85 | NC_004041 | GCCTCG | 2 | 12 | 225277 | 225288 | 0 % | 16.67 % | 33.33 % | 50 % | 21492756 |
86 | NC_004041 | ACCTTC | 2 | 12 | 225442 | 225453 | 16.67 % | 33.33 % | 0 % | 50 % | 21492756 |
87 | NC_004041 | ATCGGC | 2 | 12 | 225819 | 225830 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492756 |
88 | NC_004041 | AGGGCG | 2 | 12 | 236060 | 236071 | 16.67 % | 0 % | 66.67 % | 16.67 % | 21492743 |
89 | NC_004041 | TTCTCG | 2 | 12 | 238264 | 238275 | 0 % | 50 % | 16.67 % | 33.33 % | 21492741 |
90 | NC_004041 | CGTGCC | 2 | 12 | 238960 | 238971 | 0 % | 16.67 % | 33.33 % | 50 % | 21492740 |
91 | NC_004041 | CGGCGA | 2 | 12 | 240862 | 240873 | 16.67 % | 0 % | 50 % | 33.33 % | 21492738 |
92 | NC_004041 | TCGATC | 2 | 12 | 241989 | 242000 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 21492737 |
93 | NC_004041 | GTCGCG | 2 | 12 | 246157 | 246168 | 0 % | 16.67 % | 50 % | 33.33 % | 21492734 |
94 | NC_004041 | TCCGAT | 2 | 12 | 247963 | 247974 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 21492731 |
95 | NC_004041 | AACGGA | 2 | 12 | 249728 | 249739 | 50 % | 0 % | 33.33 % | 16.67 % | 21492730 |
96 | NC_004041 | GCTGAT | 2 | 12 | 251555 | 251566 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 89255371 |
97 | NC_004041 | ACATAG | 2 | 12 | 251858 | 251869 | 50 % | 16.67 % | 16.67 % | 16.67 % | 89255371 |
98 | NC_004041 | GTTCGC | 2 | 12 | 252601 | 252612 | 0 % | 33.33 % | 33.33 % | 33.33 % | 21492728 |
99 | NC_004041 | TCGATG | 2 | 12 | 258265 | 258276 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 21492724 |
100 | NC_004041 | GCGTTG | 2 | 12 | 264732 | 264743 | 0 % | 33.33 % | 50 % | 16.67 % | 89255375 |
101 | NC_004041 | GCAGGA | 2 | 12 | 265009 | 265020 | 33.33 % | 0 % | 50 % | 16.67 % | 21492718 |
102 | NC_004041 | CGGCGC | 2 | 12 | 270159 | 270170 | 0 % | 0 % | 50 % | 50 % | 21492715 |
103 | NC_004041 | GGCCAA | 2 | 12 | 270587 | 270598 | 33.33 % | 0 % | 33.33 % | 33.33 % | 21492714 |
104 | NC_004041 | ACGGGT | 2 | 12 | 271711 | 271722 | 16.67 % | 16.67 % | 50 % | 16.67 % | 21492714 |
105 | NC_004041 | GGGCTG | 2 | 12 | 272686 | 272697 | 0 % | 16.67 % | 66.67 % | 16.67 % | 21492713 |
106 | NC_004041 | TCGACG | 2 | 12 | 276756 | 276767 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492710 |
107 | NC_004041 | GATCGG | 2 | 12 | 289687 | 289698 | 16.67 % | 16.67 % | 50 % | 16.67 % | 89255381 |
108 | NC_004041 | GCAATG | 2 | 12 | 289757 | 289768 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 89255381 |
109 | NC_004041 | ACCGCA | 2 | 12 | 290581 | 290592 | 33.33 % | 0 % | 16.67 % | 50 % | 21492696 |
110 | NC_004041 | AAGTCG | 2 | 12 | 291002 | 291013 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 89255382 |
111 | NC_004041 | TTTGAT | 2 | 12 | 291552 | 291563 | 16.67 % | 66.67 % | 16.67 % | 0 % | 21492694 |
112 | NC_004041 | CATAGC | 2 | 12 | 294563 | 294574 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 21492691 |
113 | NC_004041 | ACGCTC | 2 | 12 | 297976 | 297987 | 16.67 % | 16.67 % | 16.67 % | 50 % | 21492688 |
114 | NC_004041 | TGTAGG | 2 | 12 | 304238 | 304249 | 16.67 % | 33.33 % | 50 % | 0 % | 21492680 |
115 | NC_004041 | GCAGAT | 2 | 12 | 304296 | 304307 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 21492680 |
116 | NC_004041 | CGAAGG | 2 | 12 | 305462 | 305473 | 33.33 % | 0 % | 50 % | 16.67 % | 21492678 |
117 | NC_004041 | ACCGCG | 2 | 12 | 305767 | 305778 | 16.67 % | 0 % | 33.33 % | 50 % | 21492678 |
118 | NC_004041 | GCGCCG | 2 | 12 | 306479 | 306490 | 0 % | 0 % | 50 % | 50 % | 21492678 |
119 | NC_004041 | TCGCCT | 2 | 12 | 306713 | 306724 | 0 % | 33.33 % | 16.67 % | 50 % | 21492678 |
120 | NC_004041 | TGAGCC | 2 | 12 | 307815 | 307826 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492676 |
121 | NC_004041 | TGGCGA | 2 | 12 | 308484 | 308495 | 16.67 % | 16.67 % | 50 % | 16.67 % | 21492676 |
122 | NC_004041 | GGCATG | 2 | 12 | 314367 | 314378 | 16.67 % | 16.67 % | 50 % | 16.67 % | 21492671 |
123 | NC_004041 | AAACCG | 2 | 12 | 316663 | 316674 | 50 % | 0 % | 16.67 % | 33.33 % | 89255387 |
124 | NC_004041 | GCCCGA | 2 | 12 | 334039 | 334050 | 16.67 % | 0 % | 33.33 % | 50 % | 21493001 |
125 | NC_004041 | CGTGGC | 2 | 12 | 340803 | 340814 | 0 % | 16.67 % | 50 % | 33.33 % | 89255394 |
126 | NC_004041 | GCTTAT | 2 | 12 | 342852 | 342863 | 16.67 % | 50 % | 16.67 % | 16.67 % | 89255396 |
127 | NC_004041 | GGCAAT | 2 | 12 | 343833 | 343844 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 89255396 |
128 | NC_004041 | CCAAGG | 2 | 12 | 358561 | 358572 | 33.33 % | 0 % | 33.33 % | 33.33 % | 21492976 |
129 | NC_004041 | AAGGTT | 2 | 12 | 358638 | 358649 | 33.33 % | 33.33 % | 33.33 % | 0 % | 21492976 |
130 | NC_004041 | CCGCGC | 2 | 12 | 362106 | 362117 | 0 % | 0 % | 33.33 % | 66.67 % | 21492971 |
131 | NC_004041 | CGGATC | 2 | 12 | 362374 | 362385 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 21492971 |
132 | NC_004041 | TTGATC | 2 | 12 | 368114 | 368125 | 16.67 % | 50 % | 16.67 % | 16.67 % | 89255406 |
133 | NC_004041 | AGTTCA | 2 | 12 | 368579 | 368590 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 89255406 |
134 | NC_004041 | AGAGCA | 2 | 12 | 369760 | 369771 | 50 % | 0 % | 33.33 % | 16.67 % | 21492966 |