MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Repeats of Methanosarcina mazei Go1 chromosome

Total Repeats: 46678

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
46501	NC_003901	GCT	2	6	4078596	4078601	0 %	33.33 %	33.33 %	33.33 %	21229454
46502	NC_003901	GAG	2	6	4078843	4078848	33.33 %	0 %	66.67 %	0 %	21229454
46503	NC_003901	TTA	2	6	4078858	4078863	33.33 %	66.67 %	0 %	0 %	21229454
46504	NC_003901	TCC	2	6	4078895	4078900	0 %	33.33 %	0 %	66.67 %	21229454
46505	NC_003901	ATC	2	6	4078946	4078951	33.33 %	33.33 %	0 %	33.33 %	21229454
46506	NC_003901	TAA	2	6	4079058	4079063	66.67 %	33.33 %	0 %	0 %	21229454
46507	NC_003901	TCT	2	6	4079067	4079072	0 %	66.67 %	0 %	33.33 %	21229454
46508	NC_003901	ATT	2	6	4079160	4079165	33.33 %	66.67 %	0 %	0 %	21229454
46509	NC_003901	AGT	2	6	4079378	4079383	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
46510	NC_003901	GCT	2	6	4079397	4079402	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
46511	NC_003901	ACA	2	6	4079414	4079419	66.67 %	0 %	0 %	33.33 %	Non-Coding
46512	NC_003901	GAA	2	6	4079509	4079514	66.67 %	0 %	33.33 %	0 %	Non-Coding
46513	NC_003901	ATT	2	6	4079658	4079663	33.33 %	66.67 %	0 %	0 %	Non-Coding
46514	NC_003901	GAG	2	6	4079794	4079799	33.33 %	0 %	66.67 %	0 %	Non-Coding
46515	NC_003901	ACT	2	6	4079972	4079977	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46516	NC_003901	CTG	2	6	4080279	4080284	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
46517	NC_003901	TGT	2	6	4080384	4080389	0 %	66.67 %	33.33 %	0 %	Non-Coding
46518	NC_003901	TCA	2	6	4080411	4080416	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46519	NC_003901	TTC	2	6	4080431	4080436	0 %	66.67 %	0 %	33.33 %	Non-Coding
46520	NC_003901	CCA	2	6	4080555	4080560	33.33 %	0 %	0 %	66.67 %	21229455
46521	NC_003901	CAA	2	6	4080589	4080594	66.67 %	0 %	0 %	33.33 %	21229455
46522	NC_003901	CTT	2	6	4080832	4080837	0 %	66.67 %	0 %	33.33 %	21229455
46523	NC_003901	CTG	2	6	4080925	4080930	0 %	33.33 %	33.33 %	33.33 %	21229455
46524	NC_003901	ACT	2	6	4080959	4080964	33.33 %	33.33 %	0 %	33.33 %	21229455
46525	NC_003901	TCA	2	6	4080984	4080989	33.33 %	33.33 %	0 %	33.33 %	21229455
46526	NC_003901	TAG	2	6	4081018	4081023	33.33 %	33.33 %	33.33 %	0 %	21229455
46527	NC_003901	ATT	3	9	4081044	4081052	33.33 %	66.67 %	0 %	0 %	21229455
46528	NC_003901	TGT	2	6	4081191	4081196	0 %	66.67 %	33.33 %	0 %	21229455
46529	NC_003901	AGA	2	6	4081236	4081241	66.67 %	0 %	33.33 %	0 %	21229455
46530	NC_003901	TCC	2	6	4081279	4081284	0 %	33.33 %	0 %	66.67 %	21229456
46531	NC_003901	GTT	2	6	4081331	4081336	0 %	66.67 %	33.33 %	0 %	21229456
46532	NC_003901	TGA	2	6	4081379	4081384	33.33 %	33.33 %	33.33 %	0 %	21229456
46533	NC_003901	GAA	2	6	4081526	4081531	66.67 %	0 %	33.33 %	0 %	21229456
46534	NC_003901	TTG	2	6	4081608	4081613	0 %	66.67 %	33.33 %	0 %	21229456
46535	NC_003901	TTC	2	6	4081705	4081710	0 %	66.67 %	0 %	33.33 %	21229457
46536	NC_003901	TGG	2	6	4081850	4081855	0 %	33.33 %	66.67 %	0 %	21229457
46537	NC_003901	ATC	2	6	4081871	4081876	33.33 %	33.33 %	0 %	33.33 %	21229457
46538	NC_003901	TAC	2	6	4081880	4081885	33.33 %	33.33 %	0 %	33.33 %	21229457
46539	NC_003901	AGT	2	6	4081901	4081906	33.33 %	33.33 %	33.33 %	0 %	21229457
46540	NC_003901	AAT	2	6	4082016	4082021	66.67 %	33.33 %	0 %	0 %	21229457
46541	NC_003901	GAG	2	6	4082086	4082091	33.33 %	0 %	66.67 %	0 %	21229457
46542	NC_003901	ATA	2	6	4082281	4082286	66.67 %	33.33 %	0 %	0 %	21229457
46543	NC_003901	ATT	2	6	4082361	4082366	33.33 %	66.67 %	0 %	0 %	21229457
46544	NC_003901	GCT	2	6	4082412	4082417	0 %	33.33 %	33.33 %	33.33 %	21229457
46545	NC_003901	TGC	2	6	4082453	4082458	0 %	33.33 %	33.33 %	33.33 %	21229457
46546	NC_003901	TAT	2	6	4082518	4082523	33.33 %	66.67 %	0 %	0 %	21229457
46547	NC_003901	GTT	2	6	4082590	4082595	0 %	66.67 %	33.33 %	0 %	21229457
46548	NC_003901	TCC	2	6	4082630	4082635	0 %	33.33 %	0 %	66.67 %	21229458
46549	NC_003901	TCC	2	6	4082715	4082720	0 %	33.33 %	0 %	66.67 %	21229458
46550	NC_003901	CAT	2	6	4082782	4082787	33.33 %	33.33 %	0 %	33.33 %	21229458
46551	NC_003901	TTC	2	6	4082831	4082836	0 %	66.67 %	0 %	33.33 %	21229458
46552	NC_003901	TTC	2	6	4082930	4082935	0 %	66.67 %	0 %	33.33 %	21229458
46553	NC_003901	AAG	2	6	4082936	4082941	66.67 %	0 %	33.33 %	0 %	21229458
46554	NC_003901	TCA	2	6	4082985	4082990	33.33 %	33.33 %	0 %	33.33 %	21229458
46555	NC_003901	CTA	2	6	4083058	4083063	33.33 %	33.33 %	0 %	33.33 %	21229458
46556	NC_003901	CTT	2	6	4083070	4083075	0 %	66.67 %	0 %	33.33 %	21229458
46557	NC_003901	ATT	2	6	4083216	4083221	33.33 %	66.67 %	0 %	0 %	21229458
46558	NC_003901	TTC	2	6	4083290	4083295	0 %	66.67 %	0 %	33.33 %	21229458
46559	NC_003901	GCA	2	6	4083343	4083348	33.33 %	0 %	33.33 %	33.33 %	21229458
46560	NC_003901	GCT	2	6	4083372	4083377	0 %	33.33 %	33.33 %	33.33 %	21229458
46561	NC_003901	CTG	2	6	4083496	4083501	0 %	33.33 %	33.33 %	33.33 %	21229458
46562	NC_003901	CTT	2	6	4083568	4083573	0 %	66.67 %	0 %	33.33 %	21229458
46563	NC_003901	TAG	2	6	4083676	4083681	33.33 %	33.33 %	33.33 %	0 %	21229458
46564	NC_003901	AAT	2	6	4083863	4083868	66.67 %	33.33 %	0 %	0 %	21229458
46565	NC_003901	GTT	2	6	4083939	4083944	0 %	66.67 %	33.33 %	0 %	21229458
46566	NC_003901	TAA	2	6	4083985	4083990	66.67 %	33.33 %	0 %	0 %	21229458
46567	NC_003901	TAA	2	6	4084076	4084081	66.67 %	33.33 %	0 %	0 %	21229458
46568	NC_003901	TCA	2	6	4084110	4084115	33.33 %	33.33 %	0 %	33.33 %	21229458
46569	NC_003901	CTG	2	6	4084300	4084305	0 %	33.33 %	33.33 %	33.33 %	21229458
46570	NC_003901	AGG	2	6	4084343	4084348	33.33 %	0 %	66.67 %	0 %	21229458
46571	NC_003901	TGT	2	6	4084534	4084539	0 %	66.67 %	33.33 %	0 %	21229458
46572	NC_003901	AAG	3	9	4084583	4084591	66.67 %	0 %	33.33 %	0 %	21229458
46573	NC_003901	TTG	2	6	4084630	4084635	0 %	66.67 %	33.33 %	0 %	21229458
46574	NC_003901	GCA	2	6	4084773	4084778	33.33 %	0 %	33.33 %	33.33 %	21229458
46575	NC_003901	TCT	2	6	4084820	4084825	0 %	66.67 %	0 %	33.33 %	21229458
46576	NC_003901	ACT	2	6	4084857	4084862	33.33 %	33.33 %	0 %	33.33 %	21229458
46577	NC_003901	TTA	2	6	4084909	4084914	33.33 %	66.67 %	0 %	0 %	21229458
46578	NC_003901	TGC	2	6	4085021	4085026	0 %	33.33 %	33.33 %	33.33 %	21229458
46579	NC_003901	TGA	2	6	4085140	4085145	33.33 %	33.33 %	33.33 %	0 %	21229458
46580	NC_003901	CAA	2	6	4085164	4085169	66.67 %	0 %	0 %	33.33 %	21229458
46581	NC_003901	TTA	2	6	4085199	4085204	33.33 %	66.67 %	0 %	0 %	21229458
46582	NC_003901	TCT	2	6	4085229	4085234	0 %	66.67 %	0 %	33.33 %	21229458
46583	NC_003901	ACT	2	6	4085273	4085278	33.33 %	33.33 %	0 %	33.33 %	21229458
46584	NC_003901	AGC	2	6	4085321	4085326	33.33 %	0 %	33.33 %	33.33 %	21229458
46585	NC_003901	GAA	2	6	4085445	4085450	66.67 %	0 %	33.33 %	0 %	21229459
46586	NC_003901	CAG	2	6	4085690	4085695	33.33 %	0 %	33.33 %	33.33 %	21229459
46587	NC_003901	ATG	2	6	4085780	4085785	33.33 %	33.33 %	33.33 %	0 %	21229459
46588	NC_003901	ATA	2	6	4085820	4085825	66.67 %	33.33 %	0 %	0 %	21229459
46589	NC_003901	AAG	3	9	4086191	4086199	66.67 %	0 %	33.33 %	0 %	21229459
46590	NC_003901	AAT	2	6	4086249	4086254	66.67 %	33.33 %	0 %	0 %	21229459
46591	NC_003901	TCA	2	6	4086268	4086273	33.33 %	33.33 %	0 %	33.33 %	21229459
46592	NC_003901	CTT	2	6	4086407	4086412	0 %	66.67 %	0 %	33.33 %	21229459
46593	NC_003901	TTC	2	6	4086558	4086563	0 %	66.67 %	0 %	33.33 %	Non-Coding
46594	NC_003901	TTC	2	6	4086567	4086572	0 %	66.67 %	0 %	33.33 %	Non-Coding
46595	NC_003901	CAA	2	6	4086596	4086601	66.67 %	0 %	0 %	33.33 %	Non-Coding
46596	NC_003901	CTT	2	6	4086626	4086631	0 %	66.67 %	0 %	33.33 %	Non-Coding
46597	NC_003901	ATT	2	6	4086687	4086692	33.33 %	66.67 %	0 %	0 %	21229460
46598	NC_003901	TCA	2	6	4086724	4086729	33.33 %	33.33 %	0 %	33.33 %	21229460
46599	NC_003901	AAT	2	6	4086806	4086811	66.67 %	33.33 %	0 %	0 %	21229460
46600	NC_003901	AAT	2	6	4086941	4086946	66.67 %	33.33 %	0 %	0 %	21229460
46601	NC_003901	GTT	2	6	4087047	4087052	0 %	66.67 %	33.33 %	0 %	21229460
46602	NC_003901	CTT	2	6	4087148	4087153	0 %	66.67 %	0 %	33.33 %	21229460
46603	NC_003901	ATT	2	6	4087312	4087317	33.33 %	66.67 %	0 %	0 %	21229460
46604	NC_003901	GTC	2	6	4087326	4087331	0 %	33.33 %	33.33 %	33.33 %	21229460
46605	NC_003901	TAT	2	6	4087379	4087384	33.33 %	66.67 %	0 %	0 %	21229460
46606	NC_003901	TTG	2	6	4087403	4087408	0 %	66.67 %	33.33 %	0 %	21229460
46607	NC_003901	CCA	2	6	4087413	4087418	33.33 %	0 %	0 %	66.67 %	21229460
46608	NC_003901	TCT	2	6	4087500	4087505	0 %	66.67 %	0 %	33.33 %	21229460
46609	NC_003901	TTA	2	6	4087637	4087642	33.33 %	66.67 %	0 %	0 %	21229460
46610	NC_003901	ACC	2	6	4087652	4087657	33.33 %	0 %	0 %	66.67 %	21229460
46611	NC_003901	CAT	2	6	4087764	4087769	33.33 %	33.33 %	0 %	33.33 %	21229460
46612	NC_003901	ATA	2	6	4087795	4087800	66.67 %	33.33 %	0 %	0 %	Non-Coding
46613	NC_003901	AAT	2	6	4087827	4087832	66.67 %	33.33 %	0 %	0 %	21229461
46614	NC_003901	TAT	2	6	4087836	4087841	33.33 %	66.67 %	0 %	0 %	21229461
46615	NC_003901	TGT	2	6	4087849	4087854	0 %	66.67 %	33.33 %	0 %	21229461
46616	NC_003901	AAG	2	6	4087947	4087952	66.67 %	0 %	33.33 %	0 %	21229461
46617	NC_003901	TCG	2	6	4088093	4088098	0 %	33.33 %	33.33 %	33.33 %	21229461
46618	NC_003901	TTA	2	6	4088135	4088140	33.33 %	66.67 %	0 %	0 %	21229461
46619	NC_003901	GGA	2	6	4088394	4088399	33.33 %	0 %	66.67 %	0 %	21229461
46620	NC_003901	GCA	2	6	4088698	4088703	33.33 %	0 %	33.33 %	33.33 %	21229462
46621	NC_003901	CAT	2	6	4088744	4088749	33.33 %	33.33 %	0 %	33.33 %	21229462
46622	NC_003901	CAT	2	6	4088765	4088770	33.33 %	33.33 %	0 %	33.33 %	21229462
46623	NC_003901	ATC	2	6	4089093	4089098	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46624	NC_003901	AAG	2	6	4089195	4089200	66.67 %	0 %	33.33 %	0 %	Non-Coding
46625	NC_003901	AGC	2	6	4089223	4089228	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
46626	NC_003901	TCA	2	6	4089358	4089363	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46627	NC_003901	AAG	2	6	4089442	4089447	66.67 %	0 %	33.33 %	0 %	Non-Coding
46628	NC_003901	GTT	2	6	4089454	4089459	0 %	66.67 %	33.33 %	0 %	Non-Coding
46629	NC_003901	CTG	2	6	4089516	4089521	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
46630	NC_003901	AAG	2	6	4089590	4089595	66.67 %	0 %	33.33 %	0 %	Non-Coding
46631	NC_003901	GTT	2	6	4089602	4089607	0 %	66.67 %	33.33 %	0 %	Non-Coding
46632	NC_003901	CTG	2	6	4089664	4089669	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
46633	NC_003901	AGA	2	6	4089800	4089805	66.67 %	0 %	33.33 %	0 %	21229463
46634	NC_003901	TAC	2	6	4090088	4090093	33.33 %	33.33 %	0 %	33.33 %	21229463
46635	NC_003901	AGG	3	9	4090100	4090108	33.33 %	0 %	66.67 %	0 %	21229463
46636	NC_003901	CGT	2	6	4090544	4090549	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
46637	NC_003901	CGA	2	6	4090904	4090909	33.33 %	0 %	33.33 %	33.33 %	21229464
46638	NC_003901	AGG	2	6	4091417	4091422	33.33 %	0 %	66.67 %	0 %	21229465
46639	NC_003901	AGC	2	6	4091791	4091796	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
46640	NC_003901	CGC	2	6	4091937	4091942	0 %	0 %	33.33 %	66.67 %	21229466
46641	NC_003901	ATT	2	6	4092078	4092083	33.33 %	66.67 %	0 %	0 %	Non-Coding
46642	NC_003901	ATA	2	6	4092087	4092092	66.67 %	33.33 %	0 %	0 %	Non-Coding
46643	NC_003901	CAA	2	6	4092155	4092160	66.67 %	0 %	0 %	33.33 %	Non-Coding
46644	NC_003901	TGA	2	6	4092162	4092167	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
46645	NC_003901	CTG	2	6	4092424	4092429	0 %	33.33 %	33.33 %	33.33 %	21229467
46646	NC_003901	ATA	2	6	4092665	4092670	66.67 %	33.33 %	0 %	0 %	Non-Coding
46647	NC_003901	TTA	2	6	4092733	4092738	33.33 %	66.67 %	0 %	0 %	Non-Coding
46648	NC_003901	TCT	2	6	4092802	4092807	0 %	66.67 %	0 %	33.33 %	Non-Coding
46649	NC_003901	TGA	2	6	4092956	4092961	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
46650	NC_003901	GTT	2	6	4093304	4093309	0 %	66.67 %	33.33 %	0 %	Non-Coding
46651	NC_003901	TTC	2	6	4093314	4093319	0 %	66.67 %	0 %	33.33 %	Non-Coding
46652	NC_003901	CTT	2	6	4093525	4093530	0 %	66.67 %	0 %	33.33 %	21229470
46653	NC_003901	CAA	2	6	4093880	4093885	66.67 %	0 %	0 %	33.33 %	21229471
46654	NC_003901	GCC	2	6	4093898	4093903	0 %	0 %	33.33 %	66.67 %	21229471
46655	NC_003901	ACA	2	6	4094190	4094195	66.67 %	0 %	0 %	33.33 %	Non-Coding
46656	NC_003901	ATT	2	6	4094321	4094326	33.33 %	66.67 %	0 %	0 %	Non-Coding
46657	NC_003901	TAA	2	6	4094458	4094463	66.67 %	33.33 %	0 %	0 %	Non-Coding
46658	NC_003901	CGG	2	6	4094482	4094487	0 %	0 %	66.67 %	33.33 %	Non-Coding
46659	NC_003901	CAA	2	6	4094554	4094559	66.67 %	0 %	0 %	33.33 %	Non-Coding
46660	NC_003901	ATG	2	6	4094754	4094759	33.33 %	33.33 %	33.33 %	0 %	21229472
46661	NC_003901	TCT	2	6	4094841	4094846	0 %	66.67 %	0 %	33.33 %	21229472
46662	NC_003901	ACT	2	6	4094895	4094900	33.33 %	33.33 %	0 %	33.33 %	21229472
46663	NC_003901	AGA	2	6	4094908	4094913	66.67 %	0 %	33.33 %	0 %	21229472
46664	NC_003901	TAA	2	6	4094969	4094974	66.67 %	33.33 %	0 %	0 %	21229472
46665	NC_003901	AAT	2	6	4095032	4095037	66.67 %	33.33 %	0 %	0 %	21229472
46666	NC_003901	AGG	2	6	4095138	4095143	33.33 %	0 %	66.67 %	0 %	21229472
46667	NC_003901	ATT	2	6	4095404	4095409	33.33 %	66.67 %	0 %	0 %	21229473
46668	NC_003901	GAT	2	6	4095447	4095452	33.33 %	33.33 %	33.33 %	0 %	21229473
46669	NC_003901	ATA	2	6	4095476	4095481	66.67 %	33.33 %	0 %	0 %	21229473
46670	NC_003901	TCG	2	6	4095689	4095694	0 %	33.33 %	33.33 %	33.33 %	21229473
46671	NC_003901	TCA	2	6	4095743	4095748	33.33 %	33.33 %	0 %	33.33 %	21229473
46672	NC_003901	AAC	2	6	4095811	4095816	66.67 %	0 %	0 %	33.33 %	21229473
46673	NC_003901	CTT	2	6	4095837	4095842	0 %	66.67 %	0 %	33.33 %	21229473
46674	NC_003901	AGA	2	6	4095871	4095876	66.67 %	0 %	33.33 %	0 %	21229473
46675	NC_003901	AAT	2	6	4096047	4096052	66.67 %	33.33 %	0 %	0 %	21229473
46676	NC_003901	CTT	2	6	4096076	4096081	0 %	66.67 %	0 %	33.33 %	21229473
46677	NC_003901	TAT	2	6	4096153	4096158	33.33 %	66.67 %	0 %	0 %	21229473
46678	NC_003901	ATT	2	6	4096299	4096304	33.33 %	66.67 %	0 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.