MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Fusobacterium nucleatum subsp. nucleatum ATCC 25586 chromosome

Total Repeats: 182

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_003454	ATTTTC	2	12	725	736	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
2	NC_003454	ATTTGT	2	12	3712	3723	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
3	NC_003454	ATTTTA	2	12	26464	26475	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_003454	TATTTT	2	12	38652	38663	16.67 %	83.33 %	0 %	0 %	Non-Coding
5	NC_003454	CTGTTC	2	12	39707	39718	0 %	50 %	16.67 %	33.33 %	Non-Coding
6	NC_003454	CATTTA	2	12	41234	41245	33.33 %	50 %	0 %	16.67 %	Non-Coding
7	NC_003454	TTTATT	2	12	61771	61782	16.67 %	83.33 %	0 %	0 %	Non-Coding
8	NC_003454	TCCTTT	2	12	75502	75513	0 %	66.67 %	0 %	33.33 %	Non-Coding
9	NC_003454	CTCCTA	2	12	75780	75791	16.67 %	33.33 %	0 %	50 %	Non-Coding
10	NC_003454	ATTAAA	2	12	76198	76209	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_003454	AAAATT	2	12	99837	99848	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_003454	TATTTT	2	12	114024	114035	16.67 %	83.33 %	0 %	0 %	Non-Coding
13	NC_003454	TTTTTA	2	12	172706	172717	16.67 %	83.33 %	0 %	0 %	Non-Coding
14	NC_003454	AATTAT	2	12	175891	175902	50 %	50 %	0 %	0 %	Non-Coding
15	NC_003454	AAATTT	2	12	212550	212561	50 %	50 %	0 %	0 %	Non-Coding
16	NC_003454	ATTTCT	2	12	219678	219689	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
17	NC_003454	CTACTG	2	12	248003	248014	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
18	NC_003454	TTTTAT	2	12	255039	255050	16.67 %	83.33 %	0 %	0 %	Non-Coding
19	NC_003454	CTTTTA	2	12	265806	265817	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
20	NC_003454	ATTTAT	2	12	275717	275728	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_003454	TCAAGT	2	12	277570	277581	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
22	NC_003454	AGTAAA	2	12	277951	277962	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
23	NC_003454	AAATTG	2	12	278336	278347	50 %	33.33 %	16.67 %	0 %	Non-Coding
24	NC_003454	ATCTAA	2	12	333665	333676	50 %	33.33 %	0 %	16.67 %	Non-Coding
25	NC_003454	TAAAAT	2	12	349888	349899	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_003454	TACTAT	2	12	372395	372406	33.33 %	50 %	0 %	16.67 %	Non-Coding
27	NC_003454	TAAAAT	2	12	373331	373342	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_003454	TAGTGT	2	12	374468	374479	16.67 %	50 %	33.33 %	0 %	Non-Coding
29	NC_003454	AATTTT	3	18	378799	378816	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_003454	TAGCTT	2	12	379418	379429	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
31	NC_003454	GGATCA	2	12	380062	380073	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
32	NC_003454	TTTTCA	2	12	381400	381411	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
33	NC_003454	AGTATA	2	12	384004	384015	50 %	33.33 %	16.67 %	0 %	Non-Coding
34	NC_003454	TTATTT	2	12	386717	386728	16.67 %	83.33 %	0 %	0 %	Non-Coding
35	NC_003454	AGCTCC	2	12	386763	386774	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
36	NC_003454	ATATTT	2	12	388163	388174	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_003454	TTTTAG	2	12	409605	409616	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
38	NC_003454	TCCTTA	2	12	421471	421482	16.67 %	50 %	0 %	33.33 %	Non-Coding
39	NC_003454	TTTTAA	2	12	421626	421637	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_003454	AAAAGA	2	12	434278	434289	83.33 %	0 %	16.67 %	0 %	Non-Coding
41	NC_003454	TAAAAA	2	12	435619	435630	83.33 %	16.67 %	0 %	0 %	Non-Coding
42	NC_003454	TAAAAA	2	12	439570	439581	83.33 %	16.67 %	0 %	0 %	Non-Coding
43	NC_003454	TCCACT	2	12	458144	458155	16.67 %	33.33 %	0 %	50 %	Non-Coding
44	NC_003454	TATTAA	2	12	458192	458203	50 %	50 %	0 %	0 %	Non-Coding
45	NC_003454	AAATTA	2	12	459598	459609	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_003454	TCCTAA	2	12	459755	459766	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
47	NC_003454	CCTACA	2	12	471603	471614	33.33 %	16.67 %	0 %	50 %	Non-Coding
48	NC_003454	TTAAAA	2	12	483733	483744	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_003454	TAATGG	2	12	501201	501212	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
50	NC_003454	CTTTTA	2	12	556827	556838	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
51	NC_003454	CTTTTA	2	12	564276	564287	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
52	NC_003454	TCCCAT	2	12	564371	564382	16.67 %	33.33 %	0 %	50 %	Non-Coding
53	NC_003454	TCATTT	2	12	565328	565339	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
54	NC_003454	TCCTAT	2	12	565676	565687	16.67 %	50 %	0 %	33.33 %	Non-Coding
55	NC_003454	AAGTAT	2	12	571380	571391	50 %	33.33 %	16.67 %	0 %	Non-Coding
56	NC_003454	TTTCCA	2	12	571889	571900	16.67 %	50 %	0 %	33.33 %	Non-Coding
57	NC_003454	TCCATT	2	12	572404	572415	16.67 %	50 %	0 %	33.33 %	Non-Coding
58	NC_003454	TATTTT	2	12	575883	575894	16.67 %	83.33 %	0 %	0 %	Non-Coding
59	NC_003454	ATTTTT	2	12	582087	582098	16.67 %	83.33 %	0 %	0 %	Non-Coding
60	NC_003454	TTATTT	2	12	590419	590430	16.67 %	83.33 %	0 %	0 %	Non-Coding
61	NC_003454	ATTTTT	2	12	599903	599914	16.67 %	83.33 %	0 %	0 %	Non-Coding
62	NC_003454	TAAATC	2	12	599915	599926	50 %	33.33 %	0 %	16.67 %	Non-Coding
63	NC_003454	TTTATT	2	12	602584	602595	16.67 %	83.33 %	0 %	0 %	Non-Coding
64	NC_003454	TTTAAT	2	12	603871	603882	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_003454	TTTTAA	2	12	608801	608812	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_003454	AAAAGA	2	12	608948	608959	83.33 %	0 %	16.67 %	0 %	Non-Coding
67	NC_003454	TAAAAA	2	12	641922	641933	83.33 %	16.67 %	0 %	0 %	Non-Coding
68	NC_003454	AAAGAA	2	12	642527	642538	83.33 %	0 %	16.67 %	0 %	Non-Coding
69	NC_003454	TGATAT	2	12	652524	652535	33.33 %	50 %	16.67 %	0 %	Non-Coding
70	NC_003454	TTTAAA	2	12	664985	664996	50 %	50 %	0 %	0 %	Non-Coding
71	NC_003454	ATAAAA	2	12	667749	667760	83.33 %	16.67 %	0 %	0 %	Non-Coding
72	NC_003454	ATAAAA	2	12	676278	676289	83.33 %	16.67 %	0 %	0 %	Non-Coding
73	NC_003454	TAAAAA	2	12	686260	686271	83.33 %	16.67 %	0 %	0 %	Non-Coding
74	NC_003454	TAAATA	2	12	687050	687061	66.67 %	33.33 %	0 %	0 %	Non-Coding
75	NC_003454	TTAAAA	2	12	692269	692280	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_003454	AAGTAA	2	12	741537	741548	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
77	NC_003454	ACTAAA	2	12	753398	753409	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
78	NC_003454	AATATA	2	12	769349	769360	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_003454	GAAAAA	2	12	770754	770765	83.33 %	0 %	16.67 %	0 %	Non-Coding
80	NC_003454	TAAAAA	2	12	773249	773260	83.33 %	16.67 %	0 %	0 %	Non-Coding
81	NC_003454	TTTTAA	2	12	774986	774997	33.33 %	66.67 %	0 %	0 %	Non-Coding
82	NC_003454	ATAAAA	2	12	809203	809214	83.33 %	16.67 %	0 %	0 %	Non-Coding
83	NC_003454	AAATTA	2	12	811699	811710	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_003454	GAAAAT	2	12	815825	815836	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
85	NC_003454	ATTATC	2	12	856672	856683	33.33 %	50 %	0 %	16.67 %	Non-Coding
86	NC_003454	TTGATT	2	12	863562	863573	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
87	NC_003454	AAATAG	2	12	872743	872754	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
88	NC_003454	AAAGGA	2	12	875514	875525	66.67 %	0 %	33.33 %	0 %	Non-Coding
89	NC_003454	GTAATA	2	12	875929	875940	50 %	33.33 %	16.67 %	0 %	Non-Coding
90	NC_003454	AAATAT	2	12	881902	881913	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_003454	AAAAAT	2	12	890108	890119	83.33 %	16.67 %	0 %	0 %	Non-Coding
92	NC_003454	TGTAAC	2	12	897928	897939	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
93	NC_003454	CTGCTA	2	12	919138	919149	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
94	NC_003454	ATAGCT	2	12	925887	925898	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
95	NC_003454	TATTTT	2	12	947069	947080	16.67 %	83.33 %	0 %	0 %	Non-Coding
96	NC_003454	TAAATT	2	12	959711	959722	50 %	50 %	0 %	0 %	Non-Coding
97	NC_003454	TATTTG	2	12	983555	983566	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
98	NC_003454	ACATTT	2	12	983613	983624	33.33 %	50 %	0 %	16.67 %	Non-Coding
99	NC_003454	TTATTT	2	12	985391	985402	16.67 %	83.33 %	0 %	0 %	Non-Coding
100	NC_003454	TATATG	2	12	1012723	1012734	33.33 %	50 %	16.67 %	0 %	Non-Coding
101	NC_003454	AAAATA	2	12	1027622	1027633	83.33 %	16.67 %	0 %	0 %	Non-Coding
102	NC_003454	ATAAAA	2	12	1039860	1039871	83.33 %	16.67 %	0 %	0 %	Non-Coding
103	NC_003454	ATAAAA	2	12	1045307	1045318	83.33 %	16.67 %	0 %	0 %	Non-Coding
104	NC_003454	AATTTT	2	12	1059824	1059835	33.33 %	66.67 %	0 %	0 %	Non-Coding
105	NC_003454	AAAATT	2	12	1072062	1072073	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_003454	AATTTT	2	12	1083009	1083020	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_003454	ATTAAA	2	12	1101097	1101108	66.67 %	33.33 %	0 %	0 %	Non-Coding
108	NC_003454	TTATTT	2	12	1129516	1129527	16.67 %	83.33 %	0 %	0 %	Non-Coding
109	NC_003454	AAGTTT	2	12	1134617	1134628	33.33 %	50 %	16.67 %	0 %	Non-Coding
110	NC_003454	TAAATC	2	12	1144124	1144135	50 %	33.33 %	0 %	16.67 %	Non-Coding
111	NC_003454	AGTTTC	2	12	1144997	1145008	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
112	NC_003454	ATTTTT	2	12	1145477	1145488	16.67 %	83.33 %	0 %	0 %	Non-Coding
113	NC_003454	TTTTTC	2	12	1148752	1148763	0 %	83.33 %	0 %	16.67 %	Non-Coding
114	NC_003454	TAAAAT	2	12	1158816	1158827	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_003454	TTCTCC	2	12	1162690	1162701	0 %	50 %	0 %	50 %	Non-Coding
116	NC_003454	ATAAAA	2	12	1169537	1169548	83.33 %	16.67 %	0 %	0 %	Non-Coding
117	NC_003454	TATATT	2	12	1209122	1209133	33.33 %	66.67 %	0 %	0 %	Non-Coding
118	NC_003454	AATGAA	2	12	1245839	1245850	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
119	NC_003454	ATTTTT	2	12	1261658	1261669	16.67 %	83.33 %	0 %	0 %	Non-Coding
120	NC_003454	TTATAT	2	12	1309277	1309288	33.33 %	66.67 %	0 %	0 %	Non-Coding
121	NC_003454	AAATAG	2	12	1325049	1325060	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
122	NC_003454	TCATTT	2	12	1340781	1340792	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
123	NC_003454	AAAAGC	2	12	1350422	1350433	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
124	NC_003454	CTTATG	2	12	1354005	1354016	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
125	NC_003454	AATAAA	2	12	1362132	1362143	83.33 %	16.67 %	0 %	0 %	Non-Coding
126	NC_003454	CCTTTT	2	12	1378449	1378460	0 %	66.67 %	0 %	33.33 %	Non-Coding
127	NC_003454	ATAACA	2	12	1383614	1383625	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
128	NC_003454	TTTATA	2	12	1386355	1386366	33.33 %	66.67 %	0 %	0 %	Non-Coding
129	NC_003454	GATATT	2	12	1389630	1389641	33.33 %	50 %	16.67 %	0 %	Non-Coding
130	NC_003454	AGAATA	2	12	1439260	1439271	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
131	NC_003454	TTAAAA	2	12	1452497	1452508	66.67 %	33.33 %	0 %	0 %	Non-Coding
132	NC_003454	CAAAAA	2	12	1463967	1463978	83.33 %	0 %	0 %	16.67 %	Non-Coding
133	NC_003454	AAAATT	2	12	1486529	1486540	66.67 %	33.33 %	0 %	0 %	Non-Coding
134	NC_003454	TATTAA	2	12	1486549	1486560	50 %	50 %	0 %	0 %	Non-Coding
135	NC_003454	AAAAAT	2	12	1494921	1494932	83.33 %	16.67 %	0 %	0 %	Non-Coding
136	NC_003454	TTGAAG	2	12	1500870	1500881	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
137	NC_003454	CTTAAT	2	12	1503069	1503080	33.33 %	50 %	0 %	16.67 %	Non-Coding
138	NC_003454	ATTAAA	2	12	1503951	1503962	66.67 %	33.33 %	0 %	0 %	Non-Coding
139	NC_003454	TAAAAT	2	12	1520707	1520718	66.67 %	33.33 %	0 %	0 %	Non-Coding
140	NC_003454	TTTTCT	3	18	1522189	1522206	0 %	83.33 %	0 %	16.67 %	Non-Coding
141	NC_003454	TCCTTT	2	12	1528143	1528154	0 %	66.67 %	0 %	33.33 %	Non-Coding
142	NC_003454	CTTTAT	2	12	1534337	1534348	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
143	NC_003454	ATTATA	2	12	1539924	1539935	50 %	50 %	0 %	0 %	Non-Coding
144	NC_003454	CTCTTT	2	12	1551053	1551064	0 %	66.67 %	0 %	33.33 %	Non-Coding
145	NC_003454	ATAGGA	2	12	1561237	1561248	50 %	16.67 %	33.33 %	0 %	Non-Coding
146	NC_003454	TATTTT	2	12	1588638	1588649	16.67 %	83.33 %	0 %	0 %	Non-Coding
147	NC_003454	AAAAAG	2	12	1632219	1632230	83.33 %	0 %	16.67 %	0 %	Non-Coding
148	NC_003454	TTACAA	2	12	1645578	1645589	50 %	33.33 %	0 %	16.67 %	Non-Coding
149	NC_003454	AAATTT	2	12	1661503	1661514	50 %	50 %	0 %	0 %	Non-Coding
150	NC_003454	ATTTTT	2	12	1672908	1672919	16.67 %	83.33 %	0 %	0 %	Non-Coding
151	NC_003454	ATATTT	2	12	1690118	1690129	33.33 %	66.67 %	0 %	0 %	Non-Coding
152	NC_003454	AAGGAA	2	12	1725015	1725026	66.67 %	0 %	33.33 %	0 %	Non-Coding
153	NC_003454	AATTAA	2	12	1727736	1727747	66.67 %	33.33 %	0 %	0 %	Non-Coding
154	NC_003454	TAAAAA	2	12	1740346	1740357	83.33 %	16.67 %	0 %	0 %	Non-Coding
155	NC_003454	TTTTTA	2	12	1758020	1758031	16.67 %	83.33 %	0 %	0 %	Non-Coding
156	NC_003454	TTAATA	2	12	1767523	1767534	50 %	50 %	0 %	0 %	Non-Coding
157	NC_003454	AAAGGA	2	12	1824130	1824141	66.67 %	0 %	33.33 %	0 %	Non-Coding
158	NC_003454	TATATT	2	12	1833676	1833687	33.33 %	66.67 %	0 %	0 %	Non-Coding
159	NC_003454	AATTTA	2	12	1847628	1847639	50 %	50 %	0 %	0 %	Non-Coding
160	NC_003454	TATTTT	2	12	1848438	1848449	16.67 %	83.33 %	0 %	0 %	Non-Coding
161	NC_003454	TTTCTA	2	12	1855526	1855537	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
162	NC_003454	TTTCAT	2	12	1881467	1881478	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
163	NC_003454	TTTTCT	2	12	1885811	1885822	0 %	83.33 %	0 %	16.67 %	Non-Coding
164	NC_003454	CTTAAT	2	12	1889007	1889018	33.33 %	50 %	0 %	16.67 %	Non-Coding
165	NC_003454	AGAAAA	2	12	1890969	1890980	83.33 %	0 %	16.67 %	0 %	Non-Coding
166	NC_003454	ACTTTA	2	12	1904573	1904584	33.33 %	50 %	0 %	16.67 %	Non-Coding
167	NC_003454	TAAAAA	2	12	1910209	1910220	83.33 %	16.67 %	0 %	0 %	Non-Coding
168	NC_003454	ATTTTT	2	12	1917999	1918010	16.67 %	83.33 %	0 %	0 %	Non-Coding
169	NC_003454	AATAAA	2	12	1922134	1922145	83.33 %	16.67 %	0 %	0 %	Non-Coding
170	NC_003454	TGTTTA	2	12	1944385	1944396	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
171	NC_003454	TTTCAA	2	12	1949375	1949386	33.33 %	50 %	0 %	16.67 %	Non-Coding
172	NC_003454	TTAAAT	2	12	1956815	1956826	50 %	50 %	0 %	0 %	Non-Coding
173	NC_003454	TTATTT	2	12	1960921	1960932	16.67 %	83.33 %	0 %	0 %	Non-Coding
174	NC_003454	AAATAA	2	12	1965192	1965203	83.33 %	16.67 %	0 %	0 %	Non-Coding
175	NC_003454	ATAAAA	2	12	2058615	2058626	83.33 %	16.67 %	0 %	0 %	Non-Coding
176	NC_003454	TTTTAT	2	12	2076986	2076997	16.67 %	83.33 %	0 %	0 %	Non-Coding
177	NC_003454	TTGATT	2	12	2106380	2106391	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
178	NC_003454	TCAAAT	2	12	2113372	2113383	50 %	33.33 %	0 %	16.67 %	Non-Coding
179	NC_003454	GAAAAA	2	12	2116429	2116440	83.33 %	0 %	16.67 %	0 %	Non-Coding
180	NC_003454	TACTAT	2	12	2116623	2116634	33.33 %	50 %	0 %	16.67 %	Non-Coding
181	NC_003454	ACATTT	3	18	2128684	2128701	33.33 %	50 %	0 %	16.67 %	Non-Coding
182	NC_003454	ACTATC	2	12	2167397	2167408	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.