Hexa-nucleotide Coding Repeats of Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1
Total Repeats: 51
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_003384 | TCACGC | 2 | 12 | 3322 | 3333 | 16.67 % | 16.67 % | 16.67 % | 50 % | 18466430 |
2 | NC_003384 | GTCAGG | 2 | 12 | 4255 | 4266 | 16.67 % | 16.67 % | 50 % | 16.67 % | 18466431 |
3 | NC_003384 | GTGTAT | 2 | 12 | 14947 | 14958 | 16.67 % | 50 % | 33.33 % | 0 % | 18466450 |
4 | NC_003384 | GCTTCA | 2 | 12 | 15870 | 15881 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 18466451 |
5 | NC_003384 | ACCGCA | 2 | 12 | 24225 | 24236 | 33.33 % | 0 % | 16.67 % | 50 % | 18466464 |
6 | NC_003384 | TGGCTA | 2 | 12 | 26497 | 26508 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 18466465 |
7 | NC_003384 | CCTGTA | 2 | 12 | 29130 | 29141 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 18466469 |
8 | NC_003384 | ACCCAG | 2 | 12 | 31188 | 31199 | 33.33 % | 0 % | 16.67 % | 50 % | 18466472 |
9 | NC_003384 | GTTAGC | 2 | 12 | 39193 | 39204 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 18466477 |
10 | NC_003384 | GTAAAA | 2 | 12 | 39751 | 39762 | 66.67 % | 16.67 % | 16.67 % | 0 % | 18466478 |
11 | NC_003384 | TATTCC | 2 | 12 | 41244 | 41255 | 16.67 % | 50 % | 0 % | 33.33 % | 18466480 |
12 | NC_003384 | GCAAGA | 2 | 12 | 41339 | 41350 | 50 % | 0 % | 33.33 % | 16.67 % | 18466480 |
13 | NC_003384 | AACAAT | 2 | 12 | 44718 | 44729 | 66.67 % | 16.67 % | 0 % | 16.67 % | 18466483 |
14 | NC_003384 | GAAATG | 2 | 12 | 48587 | 48598 | 50 % | 16.67 % | 33.33 % | 0 % | 18466487 |
15 | NC_003384 | GCAACA | 2 | 12 | 51179 | 51190 | 50 % | 0 % | 16.67 % | 33.33 % | 18466490 |
16 | NC_003384 | AGGAAA | 2 | 12 | 53628 | 53639 | 66.67 % | 0 % | 33.33 % | 0 % | 18466491 |
17 | NC_003384 | TGGCTG | 2 | 12 | 62270 | 62281 | 0 % | 33.33 % | 50 % | 16.67 % | 18466498 |
18 | NC_003384 | AATATC | 2 | 12 | 65772 | 65783 | 50 % | 33.33 % | 0 % | 16.67 % | 18466502 |
19 | NC_003384 | CTTGTT | 2 | 12 | 65903 | 65914 | 0 % | 66.67 % | 16.67 % | 16.67 % | 18466502 |
20 | NC_003384 | CAAGAT | 2 | 12 | 68572 | 68583 | 50 % | 16.67 % | 16.67 % | 16.67 % | 18466503 |
21 | NC_003384 | TTCGGG | 2 | 12 | 81721 | 81732 | 0 % | 33.33 % | 50 % | 16.67 % | 18466511 |
22 | NC_003384 | CAAACA | 2 | 12 | 87525 | 87536 | 66.67 % | 0 % | 0 % | 33.33 % | 18466516 |
23 | NC_003384 | GTTCCG | 2 | 12 | 92138 | 92149 | 0 % | 33.33 % | 33.33 % | 33.33 % | 18466521 |
24 | NC_003384 | TCAATA | 2 | 12 | 97592 | 97603 | 50 % | 33.33 % | 0 % | 16.67 % | 18466526 |
25 | NC_003384 | GGATGC | 2 | 12 | 98326 | 98337 | 16.67 % | 16.67 % | 50 % | 16.67 % | 18466527 |
26 | NC_003384 | GTATCC | 2 | 12 | 100546 | 100557 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 18466530 |
27 | NC_003384 | GTGTCT | 2 | 12 | 103351 | 103362 | 0 % | 50 % | 33.33 % | 16.67 % | 18466535 |
28 | NC_003384 | CAGCGG | 2 | 12 | 110263 | 110274 | 16.67 % | 0 % | 50 % | 33.33 % | 18466544 |
29 | NC_003384 | ATGCGG | 2 | 12 | 113974 | 113985 | 16.67 % | 16.67 % | 50 % | 16.67 % | 18466551 |
30 | NC_003384 | CTGGTC | 2 | 12 | 115373 | 115384 | 0 % | 33.33 % | 33.33 % | 33.33 % | 18466553 |
31 | NC_003384 | GACGGT | 2 | 12 | 118137 | 118148 | 16.67 % | 16.67 % | 50 % | 16.67 % | 18466557 |
32 | NC_003384 | TTTCGC | 2 | 12 | 120858 | 120869 | 0 % | 50 % | 16.67 % | 33.33 % | 18466562 |
33 | NC_003384 | ACAGCG | 2 | 12 | 124189 | 124200 | 33.33 % | 0 % | 33.33 % | 33.33 % | 18466566 |
34 | NC_003384 | GTCAGT | 2 | 12 | 135210 | 135221 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 18466577 |
35 | NC_003384 | CGAAGA | 2 | 12 | 145075 | 145086 | 50 % | 0 % | 33.33 % | 16.67 % | 18466589 |
36 | NC_003384 | GCGCGG | 2 | 12 | 147377 | 147388 | 0 % | 0 % | 66.67 % | 33.33 % | 18466589 |
37 | NC_003384 | TTGAAA | 2 | 12 | 152959 | 152970 | 50 % | 33.33 % | 16.67 % | 0 % | 18466595 |
38 | NC_003384 | GCTAAG | 2 | 12 | 155516 | 155527 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 18466599 |
39 | NC_003384 | AGCGCA | 2 | 12 | 164926 | 164937 | 33.33 % | 0 % | 33.33 % | 33.33 % | 18466605 |
40 | NC_003384 | AGCGCG | 2 | 12 | 171423 | 171434 | 16.67 % | 0 % | 50 % | 33.33 % | 18466611 |
41 | NC_003384 | GGCAGG | 2 | 12 | 171508 | 171519 | 16.67 % | 0 % | 66.67 % | 16.67 % | 18466611 |
42 | NC_003384 | GACCAG | 2 | 12 | 174507 | 174518 | 33.33 % | 0 % | 33.33 % | 33.33 % | 18466616 |
43 | NC_003384 | AAGACC | 2 | 12 | 178376 | 178387 | 50 % | 0 % | 16.67 % | 33.33 % | 18466621 |
44 | NC_003384 | TTTTCT | 2 | 12 | 188134 | 188145 | 0 % | 83.33 % | 0 % | 16.67 % | 18466632 |
45 | NC_003384 | GACTAT | 2 | 12 | 188800 | 188811 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 18466633 |
46 | NC_003384 | TTACTT | 2 | 12 | 192291 | 192302 | 16.67 % | 66.67 % | 0 % | 16.67 % | 18466639 |
47 | NC_003384 | GAAAAA | 2 | 12 | 198213 | 198224 | 83.33 % | 0 % | 16.67 % | 0 % | 18466641 |
48 | NC_003384 | ATTAAT | 2 | 12 | 203633 | 203644 | 50 % | 50 % | 0 % | 0 % | 18466646 |
49 | NC_003384 | ACAAAC | 2 | 12 | 214065 | 214076 | 66.67 % | 0 % | 0 % | 33.33 % | 18466657 |
50 | NC_003384 | CATTTT | 2 | 12 | 214688 | 214699 | 16.67 % | 66.67 % | 0 % | 16.67 % | 18466658 |
51 | NC_003384 | CTCTTC | 2 | 12 | 216576 | 216587 | 0 % | 50 % | 0 % | 50 % | 18466661 |