Penta-nucleotide Coding Repeats of Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1
Total Repeats: 120
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_003384 | ACTAA | 2 | 10 | 7881 | 7890 | 60 % | 20 % | 0 % | 20 % | 18466440 |
2 | NC_003384 | GTCAT | 2 | 10 | 8299 | 8308 | 20 % | 40 % | 20 % | 20 % | 18466441 |
3 | NC_003384 | ATTTT | 2 | 10 | 9418 | 9427 | 20 % | 80 % | 0 % | 0 % | 18466443 |
4 | NC_003384 | CAGAT | 2 | 10 | 9702 | 9711 | 40 % | 20 % | 20 % | 20 % | 18466444 |
5 | NC_003384 | CTCAT | 2 | 10 | 9853 | 9862 | 20 % | 40 % | 0 % | 40 % | 18466444 |
6 | NC_003384 | TGCGG | 2 | 10 | 16217 | 16226 | 0 % | 20 % | 60 % | 20 % | 18466452 |
7 | NC_003384 | CATGC | 2 | 10 | 20303 | 20312 | 20 % | 20 % | 20 % | 40 % | 18466457 |
8 | NC_003384 | TGCTC | 2 | 10 | 22170 | 22179 | 0 % | 40 % | 20 % | 40 % | 18466461 |
9 | NC_003384 | AAGGC | 2 | 10 | 23074 | 23083 | 40 % | 0 % | 40 % | 20 % | 18466462 |
10 | NC_003384 | GAAGA | 2 | 10 | 23286 | 23295 | 60 % | 0 % | 40 % | 0 % | 18466462 |
11 | NC_003384 | GATGT | 2 | 10 | 25468 | 25477 | 20 % | 40 % | 40 % | 0 % | 18466464 |
12 | NC_003384 | ATTTC | 2 | 10 | 26218 | 26227 | 20 % | 60 % | 0 % | 20 % | 18466464 |
13 | NC_003384 | ACACC | 2 | 10 | 26881 | 26890 | 40 % | 0 % | 0 % | 60 % | 18466465 |
14 | NC_003384 | CATTT | 2 | 10 | 28923 | 28932 | 20 % | 60 % | 0 % | 20 % | 18466469 |
15 | NC_003384 | GGTTT | 2 | 10 | 31714 | 31723 | 0 % | 60 % | 40 % | 0 % | 18466472 |
16 | NC_003384 | TAAGC | 2 | 10 | 35697 | 35706 | 40 % | 20 % | 20 % | 20 % | 18466474 |
17 | NC_003384 | TCGCG | 2 | 10 | 37162 | 37171 | 0 % | 20 % | 40 % | 40 % | 18466475 |
18 | NC_003384 | TTGAA | 2 | 10 | 38135 | 38144 | 40 % | 40 % | 20 % | 0 % | 18466476 |
19 | NC_003384 | AACCT | 2 | 10 | 44606 | 44615 | 40 % | 20 % | 0 % | 40 % | 18466482 |
20 | NC_003384 | ATTCT | 2 | 10 | 44830 | 44839 | 20 % | 60 % | 0 % | 20 % | 18466483 |
21 | NC_003384 | TCCCC | 2 | 10 | 49951 | 49960 | 0 % | 20 % | 0 % | 80 % | 18466489 |
22 | NC_003384 | AATGA | 2 | 10 | 50283 | 50292 | 60 % | 20 % | 20 % | 0 % | 18466490 |
23 | NC_003384 | GCAGT | 2 | 10 | 50547 | 50556 | 20 % | 20 % | 40 % | 20 % | 18466490 |
24 | NC_003384 | GCTTT | 2 | 10 | 53800 | 53809 | 0 % | 60 % | 20 % | 20 % | 18466491 |
25 | NC_003384 | GCTCT | 2 | 10 | 57884 | 57893 | 0 % | 40 % | 20 % | 40 % | 18466492 |
26 | NC_003384 | TTACA | 2 | 10 | 58116 | 58125 | 40 % | 40 % | 0 % | 20 % | 18466493 |
27 | NC_003384 | TCAGA | 2 | 10 | 59867 | 59876 | 40 % | 20 % | 20 % | 20 % | 18466495 |
28 | NC_003384 | GTAAG | 2 | 10 | 60059 | 60068 | 40 % | 20 % | 40 % | 0 % | 18466495 |
29 | NC_003384 | CCCGG | 2 | 10 | 66248 | 66257 | 0 % | 0 % | 40 % | 60 % | 18466503 |
30 | NC_003384 | ATGGT | 2 | 10 | 67750 | 67759 | 20 % | 40 % | 40 % | 0 % | 18466503 |
31 | NC_003384 | GAAGC | 2 | 10 | 68875 | 68884 | 40 % | 0 % | 40 % | 20 % | 18466503 |
32 | NC_003384 | GCAAG | 2 | 10 | 71310 | 71319 | 40 % | 0 % | 40 % | 20 % | 18466505 |
33 | NC_003384 | GAAGA | 2 | 10 | 72132 | 72141 | 60 % | 0 % | 40 % | 0 % | 18466505 |
34 | NC_003384 | GTTCA | 2 | 10 | 74479 | 74488 | 20 % | 40 % | 20 % | 20 % | 18466507 |
35 | NC_003384 | ACTGG | 2 | 10 | 76100 | 76109 | 20 % | 20 % | 40 % | 20 % | 18466507 |
36 | NC_003384 | CAATA | 2 | 10 | 77452 | 77461 | 60 % | 20 % | 0 % | 20 % | 18466508 |
37 | NC_003384 | CAAGA | 2 | 10 | 77934 | 77943 | 60 % | 0 % | 20 % | 20 % | 18466508 |
38 | NC_003384 | CATGA | 2 | 10 | 79091 | 79100 | 40 % | 20 % | 20 % | 20 % | 18466509 |
39 | NC_003384 | TGAAC | 2 | 10 | 83496 | 83505 | 40 % | 20 % | 20 % | 20 % | 32765047 |
40 | NC_003384 | CAGAT | 2 | 10 | 83870 | 83879 | 40 % | 20 % | 20 % | 20 % | 32765047 |
41 | NC_003384 | GAGCA | 2 | 10 | 83951 | 83960 | 40 % | 0 % | 40 % | 20 % | 32765047 |
42 | NC_003384 | CTGAT | 2 | 10 | 84516 | 84525 | 20 % | 40 % | 20 % | 20 % | 18466513 |
43 | NC_003384 | TCAAA | 2 | 10 | 85565 | 85574 | 60 % | 20 % | 0 % | 20 % | 18466514 |
44 | NC_003384 | GATGG | 2 | 10 | 86510 | 86519 | 20 % | 20 % | 60 % | 0 % | 18466515 |
45 | NC_003384 | GAAGA | 2 | 10 | 89932 | 89941 | 60 % | 0 % | 40 % | 0 % | 18466519 |
46 | NC_003384 | CTTTT | 2 | 10 | 94388 | 94397 | 0 % | 80 % | 0 % | 20 % | 18466523 |
47 | NC_003384 | AGTTC | 2 | 10 | 96534 | 96543 | 20 % | 40 % | 20 % | 20 % | 18466525 |
48 | NC_003384 | ATCAA | 2 | 10 | 96577 | 96586 | 60 % | 20 % | 0 % | 20 % | 18466525 |
49 | NC_003384 | ACGTT | 2 | 10 | 99689 | 99698 | 20 % | 40 % | 20 % | 20 % | 18466528 |
50 | NC_003384 | AAGGG | 2 | 10 | 101984 | 101993 | 40 % | 0 % | 60 % | 0 % | 18466533 |
51 | NC_003384 | CACGA | 2 | 10 | 102453 | 102462 | 40 % | 0 % | 20 % | 40 % | 18466534 |
52 | NC_003384 | CTGAC | 2 | 10 | 102927 | 102936 | 20 % | 20 % | 20 % | 40 % | 18466534 |
53 | NC_003384 | GTGTT | 2 | 10 | 103396 | 103405 | 0 % | 60 % | 40 % | 0 % | 18466535 |
54 | NC_003384 | AAAAC | 2 | 10 | 104083 | 104092 | 80 % | 0 % | 0 % | 20 % | 18466535 |
55 | NC_003384 | CAGGC | 2 | 10 | 105483 | 105492 | 20 % | 0 % | 40 % | 40 % | 18466537 |
56 | NC_003384 | GTGTC | 2 | 10 | 108244 | 108253 | 0 % | 40 % | 40 % | 20 % | 18466541 |
57 | NC_003384 | GAAGC | 2 | 10 | 111570 | 111579 | 40 % | 0 % | 40 % | 20 % | 32765048 |
58 | NC_003384 | GCAGT | 2 | 10 | 111629 | 111638 | 20 % | 20 % | 40 % | 20 % | 32765048 |
59 | NC_003384 | GCGCG | 2 | 10 | 115093 | 115102 | 0 % | 0 % | 60 % | 40 % | 18466553 |
60 | NC_003384 | GGCCT | 2 | 10 | 116066 | 116075 | 0 % | 20 % | 40 % | 40 % | 18466555 |
61 | NC_003384 | AACCG | 2 | 10 | 118238 | 118247 | 40 % | 0 % | 20 % | 40 % | 18466557 |
62 | NC_003384 | ATCAC | 2 | 10 | 119747 | 119756 | 40 % | 20 % | 0 % | 40 % | 18466560 |
63 | NC_003384 | CGAAC | 2 | 10 | 121139 | 121148 | 40 % | 0 % | 20 % | 40 % | 18466564 |
64 | NC_003384 | ACGGC | 2 | 10 | 125749 | 125758 | 20 % | 0 % | 40 % | 40 % | 18466566 |
65 | NC_003384 | TCAGC | 2 | 10 | 131708 | 131717 | 20 % | 20 % | 20 % | 40 % | 18466572 |
66 | NC_003384 | GTGTG | 2 | 10 | 137063 | 137072 | 0 % | 40 % | 60 % | 0 % | 18466579 |
67 | NC_003384 | TAGCC | 2 | 10 | 137222 | 137231 | 20 % | 20 % | 20 % | 40 % | 18466580 |
68 | NC_003384 | ACTTC | 2 | 10 | 141167 | 141176 | 20 % | 40 % | 0 % | 40 % | 18466584 |
69 | NC_003384 | AAGCC | 2 | 10 | 141380 | 141389 | 40 % | 0 % | 20 % | 40 % | 18466584 |
70 | NC_003384 | ATGGC | 2 | 10 | 141876 | 141885 | 20 % | 20 % | 40 % | 20 % | 18466586 |
71 | NC_003384 | AACAT | 2 | 10 | 143248 | 143257 | 60 % | 20 % | 0 % | 20 % | 18466588 |
72 | NC_003384 | ACACC | 2 | 10 | 143542 | 143551 | 40 % | 0 % | 0 % | 60 % | 18466588 |
73 | NC_003384 | CAATC | 2 | 10 | 143750 | 143759 | 40 % | 20 % | 0 % | 40 % | 18466588 |
74 | NC_003384 | GAAAC | 2 | 10 | 146920 | 146929 | 60 % | 0 % | 20 % | 20 % | 18466589 |
75 | NC_003384 | GTTCC | 2 | 10 | 149361 | 149370 | 0 % | 40 % | 20 % | 40 % | 18466591 |
76 | NC_003384 | GAGAA | 2 | 10 | 152773 | 152782 | 60 % | 0 % | 40 % | 0 % | 18466595 |
77 | NC_003384 | GGGCG | 2 | 10 | 155174 | 155183 | 0 % | 0 % | 80 % | 20 % | 18466598 |
78 | NC_003384 | GCCAG | 2 | 10 | 155673 | 155682 | 20 % | 0 % | 40 % | 40 % | 18466599 |
79 | NC_003384 | TGCTC | 2 | 10 | 160143 | 160152 | 0 % | 40 % | 20 % | 40 % | 32765050 |
80 | NC_003384 | AGGCC | 2 | 10 | 160332 | 160341 | 20 % | 0 % | 40 % | 40 % | 32765050 |
81 | NC_003384 | GGCCT | 2 | 10 | 160773 | 160782 | 0 % | 20 % | 40 % | 40 % | 18466602 |
82 | NC_003384 | GAGCA | 2 | 10 | 160962 | 160971 | 40 % | 0 % | 40 % | 20 % | 18466602 |
83 | NC_003384 | TGCTC | 2 | 10 | 163809 | 163818 | 0 % | 40 % | 20 % | 40 % | 18466604 |
84 | NC_003384 | AGGCC | 2 | 10 | 163998 | 164007 | 20 % | 0 % | 40 % | 40 % | 18466604 |
85 | NC_003384 | GACGT | 2 | 10 | 164946 | 164955 | 20 % | 20 % | 40 % | 20 % | 18466605 |
86 | NC_003384 | GCTGG | 2 | 10 | 165611 | 165620 | 0 % | 20 % | 60 % | 20 % | 18466605 |
87 | NC_003384 | GCCTT | 2 | 10 | 167624 | 167633 | 0 % | 40 % | 20 % | 40 % | 18466607 |
88 | NC_003384 | GGGAG | 2 | 10 | 167856 | 167865 | 20 % | 0 % | 80 % | 0 % | 18466608 |
89 | NC_003384 | GAGCA | 2 | 10 | 168819 | 168828 | 40 % | 0 % | 40 % | 20 % | 18466609 |
90 | NC_003384 | GCTGC | 2 | 10 | 171705 | 171714 | 0 % | 20 % | 40 % | 40 % | 18466612 |
91 | NC_003384 | TGGCG | 2 | 10 | 173096 | 173105 | 0 % | 20 % | 60 % | 20 % | 18466613 |
92 | NC_003384 | GTCCG | 2 | 10 | 173751 | 173760 | 0 % | 20 % | 40 % | 40 % | 18466614 |
93 | NC_003384 | AGGCC | 2 | 10 | 173813 | 173822 | 20 % | 0 % | 40 % | 40 % | 18466614 |
94 | NC_003384 | GGCCG | 2 | 10 | 173886 | 173895 | 0 % | 0 % | 60 % | 40 % | 18466614 |
95 | NC_003384 | GCGCC | 2 | 10 | 174644 | 174653 | 0 % | 0 % | 40 % | 60 % | 18466616 |
96 | NC_003384 | CCAAG | 2 | 10 | 178956 | 178965 | 40 % | 0 % | 20 % | 40 % | 18466621 |
97 | NC_003384 | TAGAT | 2 | 10 | 179227 | 179236 | 40 % | 40 % | 20 % | 0 % | 18466622 |
98 | NC_003384 | AAAGT | 2 | 10 | 179238 | 179247 | 60 % | 20 % | 20 % | 0 % | 18466622 |
99 | NC_003384 | TTCCT | 2 | 10 | 180748 | 180757 | 0 % | 60 % | 0 % | 40 % | 18466624 |
100 | NC_003384 | TCCAA | 2 | 10 | 180815 | 180824 | 40 % | 20 % | 0 % | 40 % | 18466624 |
101 | NC_003384 | GATTG | 2 | 10 | 183764 | 183773 | 20 % | 40 % | 40 % | 0 % | 18466627 |
102 | NC_003384 | GGTGT | 2 | 10 | 183972 | 183981 | 0 % | 40 % | 60 % | 0 % | 18466627 |
103 | NC_003384 | ATGTT | 2 | 10 | 184266 | 184275 | 20 % | 60 % | 20 % | 0 % | 18466627 |
104 | NC_003384 | CTTAA | 2 | 10 | 184502 | 184511 | 40 % | 40 % | 0 % | 20 % | 18466628 |
105 | NC_003384 | TAATT | 2 | 10 | 188320 | 188329 | 40 % | 60 % | 0 % | 0 % | 18466632 |
106 | NC_003384 | ATGGA | 2 | 10 | 191309 | 191318 | 40 % | 20 % | 40 % | 0 % | 18466637 |
107 | NC_003384 | ATCCC | 2 | 10 | 192490 | 192499 | 20 % | 20 % | 0 % | 60 % | 18466639 |
108 | NC_003384 | GCGTC | 2 | 10 | 195344 | 195353 | 0 % | 20 % | 40 % | 40 % | 18466639 |
109 | NC_003384 | AACGA | 2 | 10 | 195834 | 195843 | 60 % | 0 % | 20 % | 20 % | 18466639 |
110 | NC_003384 | TACCT | 2 | 10 | 204432 | 204441 | 20 % | 40 % | 0 % | 40 % | 18466646 |
111 | NC_003384 | TGCAT | 2 | 10 | 205580 | 205589 | 20 % | 40 % | 20 % | 20 % | 18466646 |
112 | NC_003384 | CCCAG | 2 | 10 | 206457 | 206466 | 20 % | 0 % | 20 % | 60 % | 32765051 |
113 | NC_003384 | ACCTC | 2 | 10 | 206519 | 206528 | 20 % | 20 % | 0 % | 60 % | 32765051 |
114 | NC_003384 | GCAAC | 2 | 10 | 208301 | 208310 | 40 % | 0 % | 20 % | 40 % | 18466648 |
115 | NC_003384 | ACGTT | 2 | 10 | 209310 | 209319 | 20 % | 40 % | 20 % | 20 % | 18466649 |
116 | NC_003384 | CATTT | 2 | 10 | 210070 | 210079 | 20 % | 60 % | 0 % | 20 % | 18466650 |
117 | NC_003384 | ATGCA | 2 | 10 | 210362 | 210371 | 40 % | 20 % | 20 % | 20 % | 18466650 |
118 | NC_003384 | TCGCT | 2 | 10 | 210592 | 210601 | 0 % | 40 % | 20 % | 40 % | 18466650 |
119 | NC_003384 | AGATC | 2 | 10 | 214365 | 214374 | 40 % | 20 % | 20 % | 20 % | 18466657 |
120 | NC_003384 | GGTGG | 2 | 10 | 215845 | 215854 | 0 % | 20 % | 80 % | 0 % | 18466661 |