Tetra-nucleotide Non-Coding Repeats of Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1
Total Repeats: 162
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_003384 | GGGC | 2 | 8 | 733 | 740 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
2 | NC_003384 | ACGC | 2 | 8 | 1181 | 1188 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
3 | NC_003384 | GCTG | 2 | 8 | 1211 | 1218 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
4 | NC_003384 | GAAT | 2 | 8 | 1808 | 1815 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
5 | NC_003384 | TGGC | 2 | 8 | 1837 | 1844 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
6 | NC_003384 | TCAG | 2 | 8 | 4584 | 4591 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
7 | NC_003384 | AGTC | 2 | 8 | 4830 | 4837 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
8 | NC_003384 | GGAC | 2 | 8 | 5793 | 5800 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
9 | NC_003384 | AGCC | 2 | 8 | 5815 | 5822 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
10 | NC_003384 | ACAG | 2 | 8 | 7287 | 7294 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
11 | NC_003384 | GTAT | 2 | 8 | 7928 | 7935 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
12 | NC_003384 | CTTA | 2 | 8 | 11490 | 11497 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
13 | NC_003384 | TTAA | 2 | 8 | 14151 | 14158 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
14 | NC_003384 | AATA | 2 | 8 | 14188 | 14195 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
15 | NC_003384 | TTAA | 2 | 8 | 15531 | 15538 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
16 | NC_003384 | CTGT | 2 | 8 | 15548 | 15555 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
17 | NC_003384 | AAAT | 2 | 8 | 15677 | 15684 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
18 | NC_003384 | GTTA | 2 | 8 | 15991 | 15998 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
19 | NC_003384 | CATT | 2 | 8 | 16485 | 16492 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
20 | NC_003384 | TTTC | 2 | 8 | 16497 | 16504 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
21 | NC_003384 | GAAT | 2 | 8 | 16510 | 16517 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
22 | NC_003384 | ATTA | 2 | 8 | 16518 | 16525 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
23 | NC_003384 | TAAA | 2 | 8 | 18407 | 18414 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
24 | NC_003384 | GAAC | 2 | 8 | 18976 | 18983 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
25 | NC_003384 | AGGA | 2 | 8 | 19002 | 19009 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
26 | NC_003384 | AAGT | 2 | 8 | 19721 | 19728 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
27 | NC_003384 | CTTT | 2 | 8 | 20628 | 20635 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
28 | NC_003384 | AATT | 2 | 8 | 20668 | 20675 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
29 | NC_003384 | TGGC | 2 | 8 | 22392 | 22399 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
30 | NC_003384 | GCCC | 2 | 8 | 23308 | 23315 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
31 | NC_003384 | ATCC | 2 | 8 | 28367 | 28374 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
32 | NC_003384 | CCTG | 2 | 8 | 29368 | 29375 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
33 | NC_003384 | GTGG | 2 | 8 | 29380 | 29387 | 0 % | 25 % | 75 % | 0 % | Non-Coding |
34 | NC_003384 | GAGT | 2 | 8 | 30669 | 30676 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
35 | NC_003384 | CATC | 2 | 8 | 30825 | 30832 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
36 | NC_003384 | AGGG | 2 | 8 | 33834 | 33841 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
37 | NC_003384 | GCTC | 2 | 8 | 36075 | 36082 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
38 | NC_003384 | TAAT | 2 | 8 | 39379 | 39386 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
39 | NC_003384 | AAAT | 2 | 8 | 39439 | 39446 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
40 | NC_003384 | GTGA | 2 | 8 | 39507 | 39514 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
41 | NC_003384 | AATT | 2 | 8 | 41659 | 41666 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
42 | NC_003384 | GATT | 2 | 8 | 41767 | 41774 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
43 | NC_003384 | TTGA | 2 | 8 | 41999 | 42006 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
44 | NC_003384 | TTCG | 2 | 8 | 43153 | 43160 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
45 | NC_003384 | TGCT | 2 | 8 | 43182 | 43189 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
46 | NC_003384 | TCAT | 2 | 8 | 43234 | 43241 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
47 | NC_003384 | TGAA | 2 | 8 | 43745 | 43752 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
48 | NC_003384 | TTGG | 2 | 8 | 43773 | 43780 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
49 | NC_003384 | ATGA | 2 | 8 | 43792 | 43799 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
50 | NC_003384 | TTTG | 2 | 8 | 43816 | 43823 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
51 | NC_003384 | TGAA | 2 | 8 | 43876 | 43883 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
52 | NC_003384 | TGAA | 2 | 8 | 43919 | 43926 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
53 | NC_003384 | CTGG | 2 | 8 | 44111 | 44118 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
54 | NC_003384 | TTAA | 2 | 8 | 44177 | 44184 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
55 | NC_003384 | GAAA | 2 | 8 | 44292 | 44299 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
56 | NC_003384 | TGCC | 2 | 8 | 54012 | 54019 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
57 | NC_003384 | TGAA | 2 | 8 | 54124 | 54131 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
58 | NC_003384 | AACC | 2 | 8 | 54219 | 54226 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
59 | NC_003384 | ATTG | 2 | 8 | 55496 | 55503 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
60 | NC_003384 | TTTA | 2 | 8 | 59052 | 59059 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
61 | NC_003384 | TAAA | 2 | 8 | 62218 | 62225 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
62 | NC_003384 | AATT | 2 | 8 | 64244 | 64251 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
63 | NC_003384 | TTTG | 2 | 8 | 64303 | 64310 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
64 | NC_003384 | ATGT | 2 | 8 | 64315 | 64322 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
65 | NC_003384 | TTAT | 2 | 8 | 64397 | 64404 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
66 | NC_003384 | CTGA | 2 | 8 | 64558 | 64565 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
67 | NC_003384 | GAAA | 2 | 8 | 70558 | 70565 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
68 | NC_003384 | ATTT | 2 | 8 | 72714 | 72721 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
69 | NC_003384 | TTGG | 2 | 8 | 77176 | 77183 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
70 | NC_003384 | TGCC | 2 | 8 | 77380 | 77387 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
71 | NC_003384 | CGGC | 2 | 8 | 80743 | 80750 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
72 | NC_003384 | TCAA | 2 | 8 | 80752 | 80759 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
73 | NC_003384 | CCAA | 2 | 8 | 81081 | 81088 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
74 | NC_003384 | CTAA | 2 | 8 | 81165 | 81172 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
75 | NC_003384 | TGAA | 2 | 8 | 82120 | 82127 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
76 | NC_003384 | TTTA | 2 | 8 | 84083 | 84090 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
77 | NC_003384 | TAAC | 2 | 8 | 84307 | 84314 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
78 | NC_003384 | ATGA | 2 | 8 | 84395 | 84402 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
79 | NC_003384 | TTCC | 2 | 8 | 84436 | 84443 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
80 | NC_003384 | GCGG | 2 | 8 | 86853 | 86860 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
81 | NC_003384 | TTTA | 2 | 8 | 93228 | 93235 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
82 | NC_003384 | TGCT | 2 | 8 | 93311 | 93318 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
83 | NC_003384 | CGGT | 2 | 8 | 93350 | 93357 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
84 | NC_003384 | CCAC | 2 | 8 | 98057 | 98064 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
85 | NC_003384 | GTAA | 2 | 8 | 100715 | 100722 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
86 | NC_003384 | CCTG | 2 | 8 | 101774 | 101781 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
87 | NC_003384 | TTTA | 2 | 8 | 105720 | 105727 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
88 | NC_003384 | AAAT | 2 | 8 | 105892 | 105899 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
89 | NC_003384 | TTTA | 2 | 8 | 106344 | 106351 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
90 | NC_003384 | TAAT | 2 | 8 | 107239 | 107246 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
91 | NC_003384 | ATCC | 2 | 8 | 107637 | 107644 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
92 | NC_003384 | TCCC | 2 | 8 | 108659 | 108666 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
93 | NC_003384 | GTAT | 2 | 8 | 109924 | 109931 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
94 | NC_003384 | CAGC | 2 | 8 | 118516 | 118523 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
95 | NC_003384 | CAGC | 2 | 8 | 118870 | 118877 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
96 | NC_003384 | TCCG | 2 | 8 | 119791 | 119798 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
97 | NC_003384 | GCTG | 2 | 8 | 119911 | 119918 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
98 | NC_003384 | CTTG | 2 | 8 | 120061 | 120068 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
99 | NC_003384 | CTTT | 2 | 8 | 120308 | 120315 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
100 | NC_003384 | ATTG | 2 | 8 | 122300 | 122307 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
101 | NC_003384 | TTTA | 2 | 8 | 125903 | 125910 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
102 | NC_003384 | CTCC | 2 | 8 | 125923 | 125930 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
103 | NC_003384 | CGTT | 2 | 8 | 126220 | 126227 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
104 | NC_003384 | ATGC | 2 | 8 | 126328 | 126335 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
105 | NC_003384 | CAAG | 2 | 8 | 127115 | 127122 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
106 | NC_003384 | AAAC | 2 | 8 | 127650 | 127657 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
107 | NC_003384 | GGTG | 2 | 8 | 128405 | 128412 | 0 % | 25 % | 75 % | 0 % | Non-Coding |
108 | NC_003384 | GCTG | 2 | 8 | 129476 | 129483 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
109 | NC_003384 | TTCC | 2 | 8 | 130201 | 130208 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
110 | NC_003384 | GGCA | 2 | 8 | 130920 | 130927 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
111 | NC_003384 | ATCA | 2 | 8 | 131969 | 131976 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
112 | NC_003384 | GTCT | 2 | 8 | 132079 | 132086 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
113 | NC_003384 | TTTA | 2 | 8 | 133247 | 133254 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
114 | NC_003384 | CTGT | 2 | 8 | 141579 | 141586 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
115 | NC_003384 | TTGG | 2 | 8 | 141704 | 141711 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
116 | NC_003384 | ATTT | 2 | 8 | 142136 | 142143 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
117 | NC_003384 | AAAT | 2 | 8 | 144347 | 144354 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
118 | NC_003384 | AACA | 2 | 8 | 144605 | 144612 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
119 | NC_003384 | ACTC | 2 | 8 | 148313 | 148320 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
120 | NC_003384 | TTAA | 2 | 8 | 148601 | 148608 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
121 | NC_003384 | TCCG | 2 | 8 | 150625 | 150632 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
122 | NC_003384 | CACT | 2 | 8 | 152467 | 152474 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
123 | NC_003384 | AATA | 2 | 8 | 154321 | 154328 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
124 | NC_003384 | AATA | 2 | 8 | 154354 | 154361 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
125 | NC_003384 | GCTT | 2 | 8 | 155867 | 155874 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
126 | NC_003384 | TAAA | 2 | 8 | 157145 | 157152 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
127 | NC_003384 | GTCC | 2 | 8 | 158005 | 158012 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
128 | NC_003384 | GTCC | 2 | 8 | 158081 | 158088 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
129 | NC_003384 | CGGT | 2 | 8 | 158819 | 158826 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
130 | NC_003384 | TGCC | 2 | 8 | 159420 | 159427 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
131 | NC_003384 | GGGC | 2 | 8 | 160478 | 160485 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
132 | NC_003384 | GCTC | 2 | 8 | 160634 | 160641 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
133 | NC_003384 | GATT | 2 | 8 | 162804 | 162811 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
134 | NC_003384 | GCGG | 2 | 8 | 162985 | 162992 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
135 | NC_003384 | TTTA | 2 | 8 | 175330 | 175337 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
136 | NC_003384 | CTCC | 2 | 8 | 175350 | 175357 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
137 | NC_003384 | TCAT | 2 | 8 | 176434 | 176441 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
138 | NC_003384 | CAAG | 2 | 8 | 176607 | 176614 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
139 | NC_003384 | TTGG | 2 | 8 | 177578 | 177585 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
140 | NC_003384 | ATAA | 2 | 8 | 177815 | 177822 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
141 | NC_003384 | ATAG | 2 | 8 | 177824 | 177831 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
142 | NC_003384 | ATTA | 2 | 8 | 182576 | 182583 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
143 | NC_003384 | TTAA | 2 | 8 | 182823 | 182830 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
144 | NC_003384 | AATT | 2 | 8 | 182980 | 182987 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
145 | NC_003384 | AAAT | 2 | 8 | 183068 | 183075 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
146 | NC_003384 | TGAA | 2 | 8 | 185645 | 185652 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
147 | NC_003384 | GGAA | 2 | 8 | 187511 | 187518 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
148 | NC_003384 | GTTA | 2 | 8 | 188361 | 188368 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
149 | NC_003384 | ACCA | 2 | 8 | 189072 | 189079 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
150 | NC_003384 | GCAA | 2 | 8 | 192237 | 192244 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
151 | NC_003384 | GATT | 2 | 8 | 199002 | 199009 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
152 | NC_003384 | AAGT | 2 | 8 | 199273 | 199280 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
153 | NC_003384 | TCAC | 2 | 8 | 199338 | 199345 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
154 | NC_003384 | TAGA | 2 | 8 | 201162 | 201169 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
155 | NC_003384 | TCAC | 2 | 8 | 201296 | 201303 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
156 | NC_003384 | AACC | 2 | 8 | 205698 | 205705 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
157 | NC_003384 | GATG | 2 | 8 | 210712 | 210719 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
158 | NC_003384 | TTTC | 2 | 8 | 212358 | 212365 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
159 | NC_003384 | TTTC | 2 | 8 | 212957 | 212964 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
160 | NC_003384 | GTCA | 2 | 8 | 215492 | 215499 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
161 | NC_003384 | CCTT | 2 | 8 | 216715 | 216722 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
162 | NC_003384 | TCCG | 2 | 8 | 216840 | 216847 | 0 % | 25 % | 25 % | 50 % | Non-Coding |