MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Nostoc sp. PCC 7120 plasmid pCC7120delta

Total Repeats: 166

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_003273	ATG	2	6	19	24	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2	NC_003273	CCA	2	6	30	35	33.33 %	0 %	0 %	66.67 %	Non-Coding
3	NC_003273	ACC	3	9	118	126	33.33 %	0 %	0 %	66.67 %	Non-Coding
4	NC_003273	AGT	2	6	1352	1357	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
5	NC_003273	TCA	2	6	1359	1364	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6	NC_003273	TGG	2	6	1367	1372	0 %	33.33 %	66.67 %	0 %	Non-Coding
7	NC_003273	ATG	2	6	1425	1430	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_003273	ACT	2	6	1557	1562	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9	NC_003273	TCC	2	6	1622	1627	0 %	33.33 %	0 %	66.67 %	Non-Coding
10	NC_003273	TGT	2	6	1870	1875	0 %	66.67 %	33.33 %	0 %	Non-Coding
11	NC_003273	CAC	2	6	2311	2316	33.33 %	0 %	0 %	66.67 %	Non-Coding
12	NC_003273	CTT	2	6	2368	2373	0 %	66.67 %	0 %	33.33 %	Non-Coding
13	NC_003273	GTA	2	6	2412	2417	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
14	NC_003273	AAC	2	6	2507	2512	66.67 %	0 %	0 %	33.33 %	Non-Coding
15	NC_003273	AAC	2	6	2527	2532	66.67 %	0 %	0 %	33.33 %	Non-Coding
16	NC_003273	ATT	2	6	2730	2735	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_003273	AGA	2	6	2988	2993	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_003273	GAT	2	6	4855	4860	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_003273	ATG	2	6	4864	4869	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
20	NC_003273	CAT	2	6	4953	4958	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
21	NC_003273	GTT	2	6	5066	5071	0 %	66.67 %	33.33 %	0 %	Non-Coding
22	NC_003273	GAA	2	6	5075	5080	66.67 %	0 %	33.33 %	0 %	Non-Coding
23	NC_003273	AAT	2	6	7004	7009	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_003273	CAG	2	6	8647	8652	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
25	NC_003273	CTT	2	6	8653	8658	0 %	66.67 %	0 %	33.33 %	Non-Coding
26	NC_003273	GGC	2	6	8666	8671	0 %	0 %	66.67 %	33.33 %	Non-Coding
27	NC_003273	GAT	2	6	8698	8703	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_003273	ATT	2	6	9492	9497	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_003273	CAG	2	6	9669	9674	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
30	NC_003273	GAT	2	6	9678	9683	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_003273	TTA	2	6	10948	10953	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_003273	GTA	2	6	10986	10991	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
33	NC_003273	TAG	2	6	11006	11011	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
34	NC_003273	TAT	2	6	11026	11031	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_003273	CTT	2	6	11180	11185	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_003273	CAG	2	6	11356	11361	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
37	NC_003273	GGT	2	6	12242	12247	0 %	33.33 %	66.67 %	0 %	Non-Coding
38	NC_003273	GCT	2	6	12278	12283	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
39	NC_003273	TCA	2	6	12543	12548	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_003273	ACT	2	6	13167	13172	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
41	NC_003273	TAC	2	6	13183	13188	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
42	NC_003273	TGT	2	6	13298	13303	0 %	66.67 %	33.33 %	0 %	Non-Coding
43	NC_003273	TCC	2	6	16045	16050	0 %	33.33 %	0 %	66.67 %	Non-Coding
44	NC_003273	GGA	2	6	16063	16068	33.33 %	0 %	66.67 %	0 %	Non-Coding
45	NC_003273	ATT	2	6	16211	16216	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_003273	GGC	2	6	16218	16223	0 %	0 %	66.67 %	33.33 %	Non-Coding
47	NC_003273	ATG	2	6	17049	17054	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
48	NC_003273	GTA	2	6	17357	17362	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
49	NC_003273	ATT	2	6	17391	17396	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_003273	ATC	2	6	17425	17430	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51	NC_003273	CAA	2	6	17449	17454	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_003273	AAT	2	6	17566	17571	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_003273	AAC	2	6	19607	19612	66.67 %	0 %	0 %	33.33 %	Non-Coding
54	NC_003273	AAG	2	6	20775	20780	66.67 %	0 %	33.33 %	0 %	Non-Coding
55	NC_003273	CAG	2	6	23200	23205	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
56	NC_003273	AAT	2	6	23263	23268	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_003273	TAT	2	6	23292	23297	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_003273	AGA	2	6	23299	23304	66.67 %	0 %	33.33 %	0 %	Non-Coding
59	NC_003273	AGA	2	6	25059	25064	66.67 %	0 %	33.33 %	0 %	Non-Coding
60	NC_003273	ATT	2	6	25255	25260	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_003273	CCT	2	6	25367	25372	0 %	33.33 %	0 %	66.67 %	Non-Coding
62	NC_003273	TGG	2	6	25403	25408	0 %	33.33 %	66.67 %	0 %	Non-Coding
63	NC_003273	TGT	2	6	25441	25446	0 %	66.67 %	33.33 %	0 %	Non-Coding
64	NC_003273	CAG	2	6	25449	25454	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
65	NC_003273	TCA	2	6	25458	25463	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
66	NC_003273	AAT	2	6	26551	26556	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_003273	ATT	2	6	26665	26670	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_003273	TAA	2	6	26671	26676	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_003273	GAT	2	6	26726	26731	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
70	NC_003273	CTG	2	6	26813	26818	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
71	NC_003273	TAT	2	6	27599	27604	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_003273	TCT	2	6	27672	27677	0 %	66.67 %	0 %	33.33 %	Non-Coding
73	NC_003273	CGA	2	6	28041	28046	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
74	NC_003273	TCC	2	6	28050	28055	0 %	33.33 %	0 %	66.67 %	Non-Coding
75	NC_003273	ATC	2	6	28124	28129	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_003273	CTT	2	6	28177	28182	0 %	66.67 %	0 %	33.33 %	Non-Coding
77	NC_003273	TAA	2	6	28283	28288	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_003273	AAG	2	6	28300	28305	66.67 %	0 %	33.33 %	0 %	Non-Coding
79	NC_003273	CTA	2	6	28657	28662	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_003273	ATT	2	6	28668	28673	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_003273	TCA	2	6	28675	28680	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
82	NC_003273	AAT	3	9	28730	28738	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_003273	AAT	3	9	29504	29512	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_003273	AGT	2	6	29640	29645	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
85	NC_003273	TAA	2	6	31234	31239	66.67 %	33.33 %	0 %	0 %	Non-Coding
86	NC_003273	AAT	2	6	31378	31383	66.67 %	33.33 %	0 %	0 %	Non-Coding
87	NC_003273	CTT	2	6	31386	31391	0 %	66.67 %	0 %	33.33 %	Non-Coding
88	NC_003273	AAT	2	6	31522	31527	66.67 %	33.33 %	0 %	0 %	Non-Coding
89	NC_003273	AAT	2	6	32254	32259	66.67 %	33.33 %	0 %	0 %	Non-Coding
90	NC_003273	ATA	2	6	32263	32268	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_003273	TAT	2	6	32330	32335	33.33 %	66.67 %	0 %	0 %	Non-Coding
92	NC_003273	GCT	2	6	33165	33170	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
93	NC_003273	TTG	2	6	33189	33194	0 %	66.67 %	33.33 %	0 %	Non-Coding
94	NC_003273	ACT	2	6	35378	35383	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
95	NC_003273	TCA	2	6	35416	35421	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
96	NC_003273	CAG	2	6	35633	35638	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
97	NC_003273	CTT	2	6	36380	36385	0 %	66.67 %	0 %	33.33 %	Non-Coding
98	NC_003273	CAC	2	6	36491	36496	33.33 %	0 %	0 %	66.67 %	Non-Coding
99	NC_003273	AAT	2	6	36505	36510	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_003273	TTA	2	6	36529	36534	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_003273	ATT	3	9	37472	37480	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_003273	GCA	2	6	37870	37875	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
103	NC_003273	TTC	2	6	38167	38172	0 %	66.67 %	0 %	33.33 %	Non-Coding
104	NC_003273	GTT	2	6	38196	38201	0 %	66.67 %	33.33 %	0 %	Non-Coding
105	NC_003273	ATG	2	6	38221	38226	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
106	NC_003273	TAA	2	6	38855	38860	66.67 %	33.33 %	0 %	0 %	Non-Coding
107	NC_003273	TAT	2	6	38882	38887	33.33 %	66.67 %	0 %	0 %	Non-Coding
108	NC_003273	AAG	2	6	38892	38897	66.67 %	0 %	33.33 %	0 %	Non-Coding
109	NC_003273	CTG	2	6	39297	39302	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
110	NC_003273	GAA	2	6	41231	41236	66.67 %	0 %	33.33 %	0 %	Non-Coding
111	NC_003273	GCG	2	6	41257	41262	0 %	0 %	66.67 %	33.33 %	Non-Coding
112	NC_003273	GGA	2	6	41296	41301	33.33 %	0 %	66.67 %	0 %	Non-Coding
113	NC_003273	GGT	2	6	41323	41328	0 %	33.33 %	66.67 %	0 %	Non-Coding
114	NC_003273	AGT	2	6	43024	43029	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
115	NC_003273	ATT	2	6	44078	44083	33.33 %	66.67 %	0 %	0 %	Non-Coding
116	NC_003273	CAA	2	6	44084	44089	66.67 %	0 %	0 %	33.33 %	Non-Coding
117	NC_003273	CTA	2	6	44112	44117	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
118	NC_003273	ATC	2	6	44941	44946	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
119	NC_003273	ATT	2	6	45017	45022	33.33 %	66.67 %	0 %	0 %	Non-Coding
120	NC_003273	ATC	2	6	45038	45043	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
121	NC_003273	GAT	2	6	45285	45290	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
122	NC_003273	TGA	2	6	45381	45386	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
123	NC_003273	TTG	2	6	45594	45599	0 %	66.67 %	33.33 %	0 %	Non-Coding
124	NC_003273	ATC	2	6	45696	45701	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
125	NC_003273	TCA	2	6	45917	45922	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
126	NC_003273	CCT	2	6	45951	45956	0 %	33.33 %	0 %	66.67 %	Non-Coding
127	NC_003273	GAG	2	6	47832	47837	33.33 %	0 %	66.67 %	0 %	Non-Coding
128	NC_003273	CTT	2	6	48150	48155	0 %	66.67 %	0 %	33.33 %	Non-Coding
129	NC_003273	CAA	2	6	48214	48219	66.67 %	0 %	0 %	33.33 %	Non-Coding
130	NC_003273	CTA	2	6	49824	49829	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
131	NC_003273	CCA	2	6	49837	49842	33.33 %	0 %	0 %	66.67 %	Non-Coding
132	NC_003273	CCT	2	6	49856	49861	0 %	33.33 %	0 %	66.67 %	Non-Coding
133	NC_003273	GGA	2	6	49920	49925	33.33 %	0 %	66.67 %	0 %	Non-Coding
134	NC_003273	CAG	2	6	50158	50163	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
135	NC_003273	AGA	2	6	50198	50203	66.67 %	0 %	33.33 %	0 %	Non-Coding
136	NC_003273	CGA	2	6	50326	50331	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
137	NC_003273	TGC	2	6	50368	50373	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
138	NC_003273	ATT	2	6	50391	50396	33.33 %	66.67 %	0 %	0 %	Non-Coding
139	NC_003273	TGG	2	6	50634	50639	0 %	33.33 %	66.67 %	0 %	Non-Coding
140	NC_003273	CAA	2	6	50874	50879	66.67 %	0 %	0 %	33.33 %	Non-Coding
141	NC_003273	GCC	2	6	51061	51066	0 %	0 %	33.33 %	66.67 %	Non-Coding
142	NC_003273	CCT	2	6	51391	51396	0 %	33.33 %	0 %	66.67 %	Non-Coding
143	NC_003273	TTC	2	6	51398	51403	0 %	66.67 %	0 %	33.33 %	Non-Coding
144	NC_003273	CTA	2	6	51413	51418	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
145	NC_003273	GAT	2	6	51553	51558	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
146	NC_003273	TTG	2	6	51781	51786	0 %	66.67 %	33.33 %	0 %	Non-Coding
147	NC_003273	CTC	2	6	52033	52038	0 %	33.33 %	0 %	66.67 %	Non-Coding
148	NC_003273	GAT	2	6	52091	52096	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
149	NC_003273	ATT	2	6	52177	52182	33.33 %	66.67 %	0 %	0 %	Non-Coding
150	NC_003273	TTG	2	6	52218	52223	0 %	66.67 %	33.33 %	0 %	Non-Coding
151	NC_003273	TAC	2	6	52284	52289	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
152	NC_003273	AAG	2	6	52945	52950	66.67 %	0 %	33.33 %	0 %	Non-Coding
153	NC_003273	TTA	2	6	53167	53172	33.33 %	66.67 %	0 %	0 %	Non-Coding
154	NC_003273	GTA	2	6	53207	53212	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
155	NC_003273	TAA	2	6	53232	53237	66.67 %	33.33 %	0 %	0 %	Non-Coding
156	NC_003273	TAT	2	6	53247	53252	33.33 %	66.67 %	0 %	0 %	Non-Coding
157	NC_003273	CTA	2	6	53261	53266	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
158	NC_003273	AGA	2	6	53275	53280	66.67 %	0 %	33.33 %	0 %	Non-Coding
159	NC_003273	CAA	2	6	53291	53296	66.67 %	0 %	0 %	33.33 %	Non-Coding
160	NC_003273	TGT	2	6	53551	53556	0 %	66.67 %	33.33 %	0 %	Non-Coding
161	NC_003273	TTG	2	6	53563	53568	0 %	66.67 %	33.33 %	0 %	Non-Coding
162	NC_003273	TTG	2	6	54347	54352	0 %	66.67 %	33.33 %	0 %	Non-Coding
163	NC_003273	AAC	2	6	54358	54363	66.67 %	0 %	0 %	33.33 %	Non-Coding
164	NC_003273	AAT	2	6	54529	54534	66.67 %	33.33 %	0 %	0 %	Non-Coding
165	NC_003273	TAT	2	6	55389	55394	33.33 %	66.67 %	0 %	0 %	Non-Coding
166	NC_003273	ATT	2	6	55400	55405	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.