Penta-nucleotide Repeats of Yersinia pestis CO92 plasmid pMT1
Total Repeats: 61
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_003134 | GTTCG | 2 | 10 | 426 | 435 | 0 % | 40 % | 40 % | 20 % | 16082782 |
2 | NC_003134 | AAGGT | 2 | 10 | 775 | 784 | 40 % | 20 % | 40 % | 0 % | 16082782 |
3 | NC_003134 | AGCGC | 2 | 10 | 1175 | 1184 | 20 % | 0 % | 40 % | 40 % | 40787861 |
4 | NC_003134 | TCAAA | 2 | 10 | 1813 | 1822 | 60 % | 20 % | 0 % | 20 % | 40787861 |
5 | NC_003134 | CAGAG | 2 | 10 | 7499 | 7508 | 40 % | 0 % | 40 % | 20 % | 16082788 |
6 | NC_003134 | TTGTC | 2 | 10 | 7897 | 7906 | 0 % | 60 % | 20 % | 20 % | 16082788 |
7 | NC_003134 | TGCGC | 2 | 10 | 13799 | 13808 | 0 % | 20 % | 40 % | 40 % | 16082793 |
8 | NC_003134 | GGATG | 2 | 10 | 18771 | 18780 | 20 % | 20 % | 60 % | 0 % | 16082795 |
9 | NC_003134 | ACCAG | 2 | 10 | 19128 | 19137 | 40 % | 0 % | 20 % | 40 % | 16082796 |
10 | NC_003134 | TGAAC | 2 | 10 | 19339 | 19348 | 40 % | 20 % | 20 % | 20 % | 16082796 |
11 | NC_003134 | CGGTA | 2 | 10 | 21232 | 21241 | 20 % | 20 % | 40 % | 20 % | 16082800 |
12 | NC_003134 | CGACA | 2 | 10 | 21800 | 21809 | 40 % | 0 % | 20 % | 40 % | 16082800 |
13 | NC_003134 | CGGCA | 2 | 10 | 23047 | 23056 | 20 % | 0 % | 40 % | 40 % | 16082802 |
14 | NC_003134 | AGTGC | 2 | 10 | 27456 | 27465 | 20 % | 20 % | 40 % | 20 % | 16082806 |
15 | NC_003134 | CTTCG | 2 | 10 | 28389 | 28398 | 0 % | 40 % | 20 % | 40 % | 16082807 |
16 | NC_003134 | CGGAA | 2 | 10 | 29273 | 29282 | 40 % | 0 % | 40 % | 20 % | 16082809 |
17 | NC_003134 | AACGG | 2 | 10 | 29481 | 29490 | 40 % | 0 % | 40 % | 20 % | 16082809 |
18 | NC_003134 | TGCCC | 2 | 10 | 34654 | 34663 | 0 % | 20 % | 20 % | 60 % | 16082817 |
19 | NC_003134 | AAATT | 2 | 10 | 35792 | 35801 | 60 % | 40 % | 0 % | 0 % | 16082818 |
20 | NC_003134 | ATTTT | 2 | 10 | 36024 | 36033 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
21 | NC_003134 | TGTCG | 2 | 10 | 36495 | 36504 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
22 | NC_003134 | CCCCT | 2 | 10 | 36904 | 36913 | 0 % | 20 % | 0 % | 80 % | 40787864 |
23 | NC_003134 | TCCCC | 2 | 10 | 37052 | 37061 | 0 % | 20 % | 0 % | 80 % | 16082820 |
24 | NC_003134 | GACTG | 2 | 10 | 39056 | 39065 | 20 % | 20 % | 40 % | 20 % | 16082823 |
25 | NC_003134 | CATTG | 2 | 10 | 39744 | 39753 | 20 % | 40 % | 20 % | 20 % | 16082824 |
26 | NC_003134 | CGTCA | 2 | 10 | 43478 | 43487 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
27 | NC_003134 | ACGTA | 2 | 10 | 45546 | 45555 | 40 % | 20 % | 20 % | 20 % | 16082830 |
28 | NC_003134 | ACTTA | 2 | 10 | 47215 | 47224 | 40 % | 40 % | 0 % | 20 % | 16082831 |
29 | NC_003134 | CAGCG | 2 | 10 | 49602 | 49611 | 20 % | 0 % | 40 % | 40 % | 16082836 |
30 | NC_003134 | CCATT | 2 | 10 | 50204 | 50213 | 20 % | 40 % | 0 % | 40 % | 16082838 |
31 | NC_003134 | GGGGT | 2 | 10 | 55284 | 55293 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
32 | NC_003134 | GCTGC | 2 | 10 | 55525 | 55534 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
33 | NC_003134 | GCGAT | 2 | 10 | 55833 | 55842 | 20 % | 20 % | 40 % | 20 % | 16082845 |
34 | NC_003134 | TTTGA | 2 | 10 | 57399 | 57408 | 20 % | 60 % | 20 % | 0 % | 16082847 |
35 | NC_003134 | GCGCT | 2 | 10 | 58037 | 58046 | 0 % | 20 % | 40 % | 40 % | 16082847 |
36 | NC_003134 | ACCTT | 2 | 10 | 58437 | 58446 | 20 % | 40 % | 0 % | 40 % | 16082848 |
37 | NC_003134 | CGAAC | 2 | 10 | 58786 | 58795 | 40 % | 0 % | 20 % | 40 % | 16082848 |
38 | NC_003134 | TGCCG | 2 | 10 | 60446 | 60455 | 0 % | 20 % | 40 % | 40 % | 16082849 |
39 | NC_003134 | CGAGG | 2 | 10 | 60884 | 60893 | 20 % | 0 % | 60 % | 20 % | 16082849 |
40 | NC_003134 | GACAG | 2 | 10 | 62029 | 62038 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
41 | NC_003134 | CGACA | 2 | 10 | 62839 | 62848 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
42 | NC_003134 | TAGAG | 2 | 10 | 63044 | 63053 | 40 % | 20 % | 40 % | 0 % | 40787867 |
43 | NC_003134 | ATTCC | 2 | 10 | 64320 | 64329 | 20 % | 40 % | 0 % | 40 % | 40787868 |
44 | NC_003134 | CGCAG | 2 | 10 | 65443 | 65452 | 20 % | 0 % | 40 % | 40 % | 40787869 |
45 | NC_003134 | CGGAG | 2 | 10 | 65836 | 65845 | 20 % | 0 % | 60 % | 20 % | 16082856 |
46 | NC_003134 | AATCA | 2 | 10 | 66974 | 66983 | 60 % | 20 % | 0 % | 20 % | 16082857 |
47 | NC_003134 | AAGCG | 2 | 10 | 67388 | 67397 | 40 % | 0 % | 40 % | 20 % | 16082857 |
48 | NC_003134 | TACTG | 2 | 10 | 69778 | 69787 | 20 % | 40 % | 20 % | 20 % | 16082859 |
49 | NC_003134 | TTCTT | 2 | 10 | 70066 | 70075 | 0 % | 80 % | 0 % | 20 % | 16082859 |
50 | NC_003134 | AACGG | 2 | 10 | 73178 | 73187 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
51 | NC_003134 | TTACC | 2 | 10 | 73740 | 73749 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
52 | NC_003134 | ATTCA | 2 | 10 | 74197 | 74206 | 40 % | 40 % | 0 % | 20 % | 16082865 |
53 | NC_003134 | TAGAA | 2 | 10 | 74920 | 74929 | 60 % | 20 % | 20 % | 0 % | 40787870 |
54 | NC_003134 | CATTC | 2 | 10 | 81078 | 81087 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
55 | NC_003134 | TTTTA | 2 | 10 | 83743 | 83752 | 20 % | 80 % | 0 % | 0 % | 16082875 |
56 | NC_003134 | CAATT | 2 | 10 | 84820 | 84829 | 40 % | 40 % | 0 % | 20 % | 16082875 |
57 | NC_003134 | TGGAT | 2 | 10 | 85921 | 85930 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
58 | NC_003134 | CTGAT | 2 | 10 | 88347 | 88356 | 20 % | 40 % | 20 % | 20 % | 16082878 |
59 | NC_003134 | CGGCG | 2 | 10 | 89429 | 89438 | 0 % | 0 % | 60 % | 40 % | 16082880 |
60 | NC_003134 | AGTTC | 2 | 10 | 90952 | 90961 | 20 % | 40 % | 20 % | 20 % | 16082880 |
61 | NC_003134 | CTGCG | 2 | 10 | 94539 | 94548 | 0 % | 20 % | 40 % | 40 % | Non-Coding |