MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Yersinia pestis CO92 plasmid pPCP1

Total Repeats: 44

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_003132	TGG	2	6	1913	1918	0 %	33.33 %	66.67 %	0 %	Non-Coding
2	NC_003132	CGT	2	6	1944	1949	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3	NC_003132	TGA	2	6	1958	1963	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4	NC_003132	CAG	2	6	2096	2101	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
5	NC_003132	ACA	2	6	2116	2121	66.67 %	0 %	0 %	33.33 %	Non-Coding
6	NC_003132	GAT	2	6	2241	2246	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7	NC_003132	GTT	2	6	2381	2386	0 %	66.67 %	33.33 %	0 %	Non-Coding
8	NC_003132	GTC	2	6	2399	2404	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_003132	TGT	2	6	2536	2541	0 %	66.67 %	33.33 %	0 %	Non-Coding
10	NC_003132	TAC	2	6	2721	2726	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_003132	AAT	2	6	2799	2804	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_003132	GCG	2	6	3408	3413	0 %	0 %	66.67 %	33.33 %	Non-Coding
13	NC_003132	GCA	2	6	3878	3883	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
14	NC_003132	GCA	2	6	4076	4081	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_003132	AAG	2	6	4108	4113	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_003132	CAG	2	6	4155	4160	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_003132	ATG	2	6	4167	4172	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18	NC_003132	TGC	2	6	4188	4193	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19	NC_003132	ATT	2	6	4309	4314	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_003132	ATT	2	6	4794	4799	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_003132	TAA	2	6	5968	5973	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_003132	CGC	2	6	5979	5984	0 %	0 %	33.33 %	66.67 %	Non-Coding
23	NC_003132	AAT	2	6	6000	6005	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_003132	GAC	2	6	6547	6552	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
25	NC_003132	ATT	2	6	6569	6574	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_003132	ATT	2	6	6590	6595	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_003132	ATA	2	6	6624	6629	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_003132	TCC	2	6	7631	7636	0 %	33.33 %	0 %	66.67 %	Non-Coding
29	NC_003132	GGA	2	6	7645	7650	33.33 %	0 %	66.67 %	0 %	Non-Coding
30	NC_003132	AGG	2	6	7662	7667	33.33 %	0 %	66.67 %	0 %	Non-Coding
31	NC_003132	TGT	2	6	7737	7742	0 %	66.67 %	33.33 %	0 %	Non-Coding
32	NC_003132	CAC	2	6	8538	8543	33.33 %	0 %	0 %	66.67 %	Non-Coding
33	NC_003132	CAA	2	6	8589	8594	66.67 %	0 %	0 %	33.33 %	Non-Coding
34	NC_003132	CCG	2	6	8608	8613	0 %	0 %	33.33 %	66.67 %	Non-Coding
35	NC_003132	TGG	2	6	8719	8724	0 %	33.33 %	66.67 %	0 %	Non-Coding
36	NC_003132	CAA	2	6	8803	8808	66.67 %	0 %	0 %	33.33 %	Non-Coding
37	NC_003132	CAG	2	6	8868	8873	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
38	NC_003132	CAA	2	6	9023	9028	66.67 %	0 %	0 %	33.33 %	Non-Coding
39	NC_003132	TGC	2	6	9074	9079	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40	NC_003132	AAT	2	6	9191	9196	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_003132	CCT	2	6	9378	9383	0 %	33.33 %	0 %	66.67 %	Non-Coding
42	NC_003132	CCA	2	6	9408	9413	33.33 %	0 %	0 %	66.67 %	Non-Coding
43	NC_003132	AGG	2	6	9432	9437	33.33 %	0 %	66.67 %	0 %	Non-Coding
44	NC_003132	ATA	2	6	9573	9578	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.