Hexa-nucleotide Coding Repeats of Agrobacterium fabrum str. C58 plasmid Ti
Total Repeats: 55
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_003065 | ATCTAC | 2 | 12 | 6457 | 6468 | 33.33 % | 33.33 % | 0 % | 33.33 % | 16119816 |
2 | NC_003065 | TCAGCT | 2 | 12 | 16375 | 16386 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 16119823 |
3 | NC_003065 | GGCGCA | 2 | 12 | 37844 | 37855 | 16.67 % | 0 % | 50 % | 33.33 % | 16119838 |
4 | NC_003065 | GCATGC | 2 | 12 | 39772 | 39783 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 41223320 |
5 | NC_003065 | GCCGGA | 2 | 12 | 39920 | 39931 | 16.67 % | 0 % | 50 % | 33.33 % | 41223320 |
6 | NC_003065 | CGACGG | 2 | 12 | 44456 | 44467 | 16.67 % | 0 % | 50 % | 33.33 % | 16119846 |
7 | NC_003065 | TTGGCG | 2 | 12 | 44997 | 45008 | 0 % | 33.33 % | 50 % | 16.67 % | 16119847 |
8 | NC_003065 | CCCTGC | 2 | 12 | 46789 | 46800 | 0 % | 16.67 % | 16.67 % | 66.67 % | 16119849 |
9 | NC_003065 | GGCAAT | 2 | 12 | 51336 | 51347 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 16119854 |
10 | NC_003065 | TCGATC | 2 | 12 | 52699 | 52710 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 159161958 |
11 | NC_003065 | AGGATA | 2 | 12 | 57219 | 57230 | 50 % | 16.67 % | 33.33 % | 0 % | 159161959 |
12 | NC_003065 | AGCCGA | 2 | 12 | 63503 | 63514 | 33.33 % | 0 % | 33.33 % | 33.33 % | 16119862 |
13 | NC_003065 | ACTGCC | 2 | 12 | 70540 | 70551 | 16.67 % | 16.67 % | 16.67 % | 50 % | 16119873 |
14 | NC_003065 | GCCTTG | 2 | 12 | 87107 | 87118 | 0 % | 33.33 % | 33.33 % | 33.33 % | 16119887 |
15 | NC_003065 | TGACGA | 2 | 12 | 91726 | 91737 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 159161965 |
16 | NC_003065 | CGTGCC | 2 | 12 | 97036 | 97047 | 0 % | 16.67 % | 33.33 % | 50 % | 159161968 |
17 | NC_003065 | TTGCCC | 2 | 12 | 105336 | 105347 | 0 % | 33.33 % | 16.67 % | 50 % | 159161971 |
18 | NC_003065 | CGTTCC | 2 | 12 | 106392 | 106403 | 0 % | 33.33 % | 16.67 % | 50 % | 16119902 |
19 | NC_003065 | TCCCGA | 2 | 12 | 107209 | 107220 | 16.67 % | 16.67 % | 16.67 % | 50 % | 16119903 |
20 | NC_003065 | GGATCC | 2 | 12 | 108755 | 108766 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 16119904 |
21 | NC_003065 | CGAGCG | 2 | 12 | 112092 | 112103 | 16.67 % | 0 % | 50 % | 33.33 % | 16119907 |
22 | NC_003065 | CTCAAT | 2 | 12 | 112807 | 112818 | 33.33 % | 33.33 % | 0 % | 33.33 % | 16119907 |
23 | NC_003065 | CGCAAG | 2 | 12 | 121498 | 121509 | 33.33 % | 0 % | 33.33 % | 33.33 % | 16119916 |
24 | NC_003065 | CCGATC | 2 | 12 | 122939 | 122950 | 16.67 % | 16.67 % | 16.67 % | 50 % | 16119916 |
25 | NC_003065 | GACAAT | 2 | 12 | 124225 | 124236 | 50 % | 16.67 % | 16.67 % | 16.67 % | 16119916 |
26 | NC_003065 | GTGACG | 2 | 12 | 125299 | 125310 | 16.67 % | 16.67 % | 50 % | 16.67 % | 16119916 |
27 | NC_003065 | TTCGCC | 2 | 12 | 125443 | 125454 | 0 % | 33.33 % | 16.67 % | 50 % | 16119916 |
28 | NC_003065 | AACACG | 2 | 12 | 128233 | 128244 | 50 % | 0 % | 16.67 % | 33.33 % | 41223336 |
29 | NC_003065 | GCTTTT | 2 | 12 | 129840 | 129851 | 0 % | 66.67 % | 16.67 % | 16.67 % | 16119923 |
30 | NC_003065 | CAGCCG | 2 | 12 | 132251 | 132262 | 16.67 % | 0 % | 33.33 % | 50 % | 41223337 |
31 | NC_003065 | CGGTTC | 2 | 12 | 141302 | 141313 | 0 % | 33.33 % | 33.33 % | 33.33 % | 16119942 |
32 | NC_003065 | TCGATC | 2 | 12 | 141485 | 141496 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 16119942 |
33 | NC_003065 | TTCCGT | 2 | 12 | 142173 | 142184 | 0 % | 50 % | 16.67 % | 33.33 % | 16119942 |
34 | NC_003065 | GGCGAC | 2 | 12 | 142299 | 142310 | 16.67 % | 0 % | 50 % | 33.33 % | 16119942 |
35 | NC_003065 | CAATGC | 2 | 12 | 145663 | 145674 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 159161979 |
36 | NC_003065 | AGACGA | 2 | 12 | 145749 | 145760 | 50 % | 0 % | 33.33 % | 16.67 % | 159161979 |
37 | NC_003065 | GCCTCG | 2 | 12 | 146442 | 146453 | 0 % | 16.67 % | 33.33 % | 50 % | 159161979 |
38 | NC_003065 | ATTTCT | 2 | 12 | 147702 | 147713 | 16.67 % | 66.67 % | 0 % | 16.67 % | 16119946 |
39 | NC_003065 | TTCTGG | 2 | 12 | 148346 | 148357 | 0 % | 50 % | 33.33 % | 16.67 % | 229007180 |
40 | NC_003065 | GGTCGA | 2 | 12 | 153123 | 153134 | 16.67 % | 16.67 % | 50 % | 16.67 % | 16119952 |
41 | NC_003065 | CTTGGG | 2 | 12 | 163472 | 163483 | 0 % | 33.33 % | 50 % | 16.67 % | 16119961 |
42 | NC_003065 | AATGAA | 2 | 12 | 163663 | 163674 | 66.67 % | 16.67 % | 16.67 % | 0 % | 159161986 |
43 | NC_003065 | CGTGGA | 2 | 12 | 164359 | 164370 | 16.67 % | 16.67 % | 50 % | 16.67 % | 159161986 |
44 | NC_003065 | GGTTCA | 2 | 12 | 165586 | 165597 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 16119964 |
45 | NC_003065 | CGGCTT | 2 | 12 | 170346 | 170357 | 0 % | 33.33 % | 33.33 % | 33.33 % | 16119968 |
46 | NC_003065 | TCCGCC | 2 | 12 | 184527 | 184538 | 0 % | 16.67 % | 16.67 % | 66.67 % | 41223307 |
47 | NC_003065 | CTCTCG | 2 | 12 | 184653 | 184664 | 0 % | 33.33 % | 16.67 % | 50 % | 16119783 |
48 | NC_003065 | GTCATC | 2 | 12 | 185090 | 185101 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 16119784 |
49 | NC_003065 | GCACGA | 2 | 12 | 186567 | 186578 | 33.33 % | 0 % | 33.33 % | 33.33 % | 16119786 |
50 | NC_003065 | TCTCGC | 2 | 12 | 188150 | 188161 | 0 % | 33.33 % | 16.67 % | 50 % | 16119787 |
51 | NC_003065 | CGTTCA | 2 | 12 | 199307 | 199318 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 159162000 |
52 | NC_003065 | CCTGCT | 2 | 12 | 199667 | 199678 | 0 % | 33.33 % | 16.67 % | 50 % | 159162000 |
53 | NC_003065 | CAAATC | 2 | 12 | 207176 | 207187 | 50 % | 16.67 % | 0 % | 33.33 % | 16119805 |
54 | NC_003065 | TGGACC | 2 | 12 | 212151 | 212162 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 159162003 |
55 | NC_003065 | CGAGGT | 2 | 12 | 213330 | 213341 | 16.67 % | 16.67 % | 50 % | 16.67 % | 16119811 |