Penta-nucleotide Repeats of Agrobacterium fabrum str. C58 plasmid Ti
Total Repeats: 137
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_003065 | ATCGA | 2 | 10 | 874 | 883 | 40 % | 20 % | 20 % | 20 % | 41223314 |
2 | NC_003065 | AAGAC | 2 | 10 | 1875 | 1884 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
3 | NC_003065 | TTTAT | 2 | 10 | 3244 | 3253 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
4 | NC_003065 | ATGAG | 2 | 10 | 3308 | 3317 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
5 | NC_003065 | AAAGG | 2 | 10 | 5451 | 5460 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
6 | NC_003065 | CCAAC | 2 | 10 | 5704 | 5713 | 40 % | 0 % | 0 % | 60 % | Non-Coding |
7 | NC_003065 | AGAGA | 2 | 10 | 6742 | 6751 | 60 % | 0 % | 40 % | 0 % | 16119816 |
8 | NC_003065 | GCGTG | 2 | 10 | 10215 | 10224 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
9 | NC_003065 | AAGCC | 2 | 10 | 12311 | 12320 | 40 % | 0 % | 20 % | 40 % | 16119820 |
10 | NC_003065 | CTTGT | 2 | 10 | 12440 | 12449 | 0 % | 60 % | 20 % | 20 % | 16119820 |
11 | NC_003065 | ACGAC | 2 | 10 | 12897 | 12906 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
12 | NC_003065 | TATTC | 2 | 10 | 14475 | 14484 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
13 | NC_003065 | GTGGC | 2 | 10 | 14615 | 14624 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
14 | NC_003065 | TTCCA | 2 | 10 | 14730 | 14739 | 20 % | 40 % | 0 % | 40 % | 16119822 |
15 | NC_003065 | CCGCA | 2 | 10 | 15624 | 15633 | 20 % | 0 % | 20 % | 60 % | 16119822 |
16 | NC_003065 | GCGAT | 2 | 10 | 17248 | 17257 | 20 % | 20 % | 40 % | 20 % | 16119823 |
17 | NC_003065 | TAAAA | 2 | 10 | 18724 | 18733 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
18 | NC_003065 | TATTG | 2 | 10 | 18743 | 18752 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
19 | NC_003065 | TTTCT | 2 | 10 | 20542 | 20551 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
20 | NC_003065 | TCCGC | 2 | 10 | 21694 | 21703 | 0 % | 20 % | 20 % | 60 % | 16119826 |
21 | NC_003065 | CGAAC | 2 | 10 | 21812 | 21821 | 40 % | 0 % | 20 % | 40 % | 16119826 |
22 | NC_003065 | AGCGC | 2 | 10 | 25108 | 25117 | 20 % | 0 % | 40 % | 40 % | 159161954 |
23 | NC_003065 | GACCG | 2 | 10 | 26438 | 26447 | 20 % | 0 % | 40 % | 40 % | 41223317 |
24 | NC_003065 | GTGAC | 2 | 10 | 27373 | 27382 | 20 % | 20 % | 40 % | 20 % | 41223318 |
25 | NC_003065 | CAGCC | 2 | 10 | 28048 | 28057 | 20 % | 0 % | 20 % | 60 % | 41223318 |
26 | NC_003065 | ACCGC | 2 | 10 | 33817 | 33826 | 20 % | 0 % | 20 % | 60 % | 16119835 |
27 | NC_003065 | CAGCG | 2 | 10 | 34980 | 34989 | 20 % | 0 % | 40 % | 40 % | 16119835 |
28 | NC_003065 | ATCCC | 2 | 10 | 38978 | 38987 | 20 % | 20 % | 0 % | 60 % | 41223319 |
29 | NC_003065 | CTTGG | 2 | 10 | 39139 | 39148 | 0 % | 40 % | 40 % | 20 % | 41223319 |
30 | NC_003065 | TGTTT | 2 | 10 | 39235 | 39244 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
31 | NC_003065 | CTGAA | 2 | 10 | 40558 | 40567 | 40 % | 20 % | 20 % | 20 % | 159161955 |
32 | NC_003065 | TTCGC | 2 | 10 | 42351 | 42360 | 0 % | 40 % | 20 % | 40 % | 16119843 |
33 | NC_003065 | CTCTT | 2 | 10 | 42533 | 42542 | 0 % | 60 % | 0 % | 40 % | 16119843 |
34 | NC_003065 | CTTCG | 2 | 10 | 44098 | 44107 | 0 % | 40 % | 20 % | 40 % | 41223323 |
35 | NC_003065 | CGAAA | 2 | 10 | 44616 | 44625 | 60 % | 0 % | 20 % | 20 % | 16119846 |
36 | NC_003065 | CATTC | 2 | 10 | 44852 | 44861 | 20 % | 40 % | 0 % | 40 % | 16119846 |
37 | NC_003065 | TCGCG | 2 | 10 | 46190 | 46199 | 0 % | 20 % | 40 % | 40 % | 16119848 |
38 | NC_003065 | GGCGA | 2 | 10 | 47288 | 47297 | 20 % | 0 % | 60 % | 20 % | 16119850 |
39 | NC_003065 | CCGGC | 2 | 10 | 49437 | 49446 | 0 % | 0 % | 40 % | 60 % | 16119850 |
40 | NC_003065 | TCGGT | 2 | 10 | 50306 | 50315 | 0 % | 40 % | 40 % | 20 % | 159161957 |
41 | NC_003065 | CGATC | 2 | 10 | 50706 | 50715 | 20 % | 20 % | 20 % | 40 % | 159161957 |
42 | NC_003065 | CTCGA | 2 | 10 | 52535 | 52544 | 20 % | 20 % | 20 % | 40 % | 159161958 |
43 | NC_003065 | AAACG | 2 | 10 | 52766 | 52775 | 60 % | 0 % | 20 % | 20 % | 159161958 |
44 | NC_003065 | TTGTC | 2 | 10 | 53593 | 53602 | 0 % | 60 % | 20 % | 20 % | 16119856 |
45 | NC_003065 | AAGGG | 2 | 10 | 55283 | 55292 | 40 % | 0 % | 60 % | 0 % | 16119857 |
46 | NC_003065 | CGCGC | 2 | 10 | 57011 | 57020 | 0 % | 0 % | 40 % | 60 % | 159161959 |
47 | NC_003065 | TTTGA | 2 | 10 | 58557 | 58566 | 20 % | 60 % | 20 % | 0 % | 16119859 |
48 | NC_003065 | CGCGG | 2 | 10 | 62588 | 62597 | 0 % | 0 % | 60 % | 40 % | 16119861 |
49 | NC_003065 | CCGGT | 2 | 10 | 63281 | 63290 | 0 % | 20 % | 40 % | 40 % | 16119862 |
50 | NC_003065 | GTGGC | 2 | 10 | 63481 | 63490 | 0 % | 20 % | 60 % | 20 % | 16119862 |
51 | NC_003065 | CCGGG | 2 | 10 | 64175 | 64184 | 0 % | 0 % | 60 % | 40 % | 16119863 |
52 | NC_003065 | CCTTG | 2 | 10 | 64987 | 64996 | 0 % | 40 % | 20 % | 40 % | 16119864 |
53 | NC_003065 | GCGCC | 2 | 10 | 73186 | 73195 | 0 % | 0 % | 40 % | 60 % | 16119875 |
54 | NC_003065 | CCATC | 2 | 10 | 76283 | 76292 | 20 % | 20 % | 0 % | 60 % | 16119877 |
55 | NC_003065 | CGCCA | 2 | 10 | 78256 | 78265 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
56 | NC_003065 | GTCGC | 2 | 10 | 78354 | 78363 | 0 % | 20 % | 40 % | 40 % | 16119880 |
57 | NC_003065 | GTGCC | 2 | 10 | 80460 | 80469 | 0 % | 20 % | 40 % | 40 % | 41223328 |
58 | NC_003065 | AGCGG | 2 | 10 | 84062 | 84071 | 20 % | 0 % | 60 % | 20 % | 16119884 |
59 | NC_003065 | TCGTG | 2 | 10 | 84472 | 84481 | 0 % | 40 % | 40 % | 20 % | 16119885 |
60 | NC_003065 | TGAGG | 2 | 10 | 85217 | 85226 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
61 | NC_003065 | AGACG | 2 | 10 | 87207 | 87216 | 40 % | 0 % | 40 % | 20 % | 16119887 |
62 | NC_003065 | AGGGC | 2 | 10 | 90152 | 90161 | 20 % | 0 % | 60 % | 20 % | 159161964 |
63 | NC_003065 | TGCGG | 2 | 10 | 91115 | 91124 | 0 % | 20 % | 60 % | 20 % | 159161965 |
64 | NC_003065 | TCATC | 2 | 10 | 93285 | 93294 | 20 % | 40 % | 0 % | 40 % | 159161966 |
65 | NC_003065 | TGTGA | 2 | 10 | 94079 | 94088 | 20 % | 40 % | 40 % | 0 % | 16119892 |
66 | NC_003065 | TGTGC | 2 | 10 | 94552 | 94561 | 0 % | 40 % | 40 % | 20 % | 16119893 |
67 | NC_003065 | ATTGC | 2 | 10 | 97945 | 97954 | 20 % | 40 % | 20 % | 20 % | 159161969 |
68 | NC_003065 | TGACC | 2 | 10 | 99903 | 99912 | 20 % | 20 % | 20 % | 40 % | 16119897 |
69 | NC_003065 | ACCGG | 2 | 10 | 100053 | 100062 | 20 % | 0 % | 40 % | 40 % | 16119897 |
70 | NC_003065 | GCGCC | 2 | 10 | 100168 | 100177 | 0 % | 0 % | 40 % | 60 % | 16119897 |
71 | NC_003065 | TCGTC | 2 | 10 | 101931 | 101940 | 0 % | 40 % | 20 % | 40 % | 16119898 |
72 | NC_003065 | GACGG | 2 | 10 | 104978 | 104987 | 20 % | 0 % | 60 % | 20 % | 159161971 |
73 | NC_003065 | CCGAT | 2 | 10 | 111135 | 111144 | 20 % | 20 % | 20 % | 40 % | 16119906 |
74 | NC_003065 | AGGGG | 2 | 10 | 112454 | 112463 | 20 % | 0 % | 80 % | 0 % | 16119907 |
75 | NC_003065 | GACCG | 2 | 10 | 114381 | 114390 | 20 % | 0 % | 40 % | 40 % | 16119907 |
76 | NC_003065 | GCGCC | 2 | 10 | 117585 | 117594 | 0 % | 0 % | 40 % | 60 % | 159161972 |
77 | NC_003065 | CGAGC | 2 | 10 | 118783 | 118792 | 20 % | 0 % | 40 % | 40 % | 16119912 |
78 | NC_003065 | AGGGA | 2 | 10 | 119123 | 119132 | 40 % | 0 % | 60 % | 0 % | Non-Coding |
79 | NC_003065 | CGGAC | 2 | 10 | 121235 | 121244 | 20 % | 0 % | 40 % | 40 % | 16119916 |
80 | NC_003065 | ACCAC | 2 | 10 | 122096 | 122105 | 40 % | 0 % | 0 % | 60 % | 16119916 |
81 | NC_003065 | CATCG | 2 | 10 | 124860 | 124869 | 20 % | 20 % | 20 % | 40 % | 16119916 |
82 | NC_003065 | TCCGC | 2 | 10 | 125798 | 125807 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
83 | NC_003065 | TCCAC | 2 | 10 | 128594 | 128603 | 20 % | 20 % | 0 % | 60 % | 41223336 |
84 | NC_003065 | GTCCA | 2 | 10 | 132364 | 132373 | 20 % | 20 % | 20 % | 40 % | 16119926 |
85 | NC_003065 | TGTCG | 2 | 10 | 132519 | 132528 | 0 % | 40 % | 40 % | 20 % | 16119926 |
86 | NC_003065 | GCCTG | 2 | 10 | 132932 | 132941 | 0 % | 20 % | 40 % | 40 % | 16119926 |
87 | NC_003065 | CGCGA | 2 | 10 | 136923 | 136932 | 20 % | 0 % | 40 % | 40 % | 41223340 |
88 | NC_003065 | GTGAC | 2 | 10 | 137463 | 137472 | 20 % | 20 % | 40 % | 20 % | 41223340 |
89 | NC_003065 | TCCGA | 2 | 10 | 137682 | 137691 | 20 % | 20 % | 20 % | 40 % | 16119932 |
90 | NC_003065 | CTCCG | 2 | 10 | 139205 | 139214 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
91 | NC_003065 | CGATC | 2 | 10 | 140007 | 140016 | 20 % | 20 % | 20 % | 40 % | 16119938 |
92 | NC_003065 | TGGTC | 2 | 10 | 141527 | 141536 | 0 % | 40 % | 40 % | 20 % | 16119942 |
93 | NC_003065 | AGCAG | 2 | 10 | 142577 | 142586 | 40 % | 0 % | 40 % | 20 % | 16119942 |
94 | NC_003065 | GACGC | 2 | 10 | 143896 | 143905 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
95 | NC_003065 | CAGGG | 2 | 10 | 145465 | 145474 | 20 % | 0 % | 60 % | 20 % | 159161979 |
96 | NC_003065 | GCGCT | 2 | 10 | 146303 | 146312 | 0 % | 20 % | 40 % | 40 % | 159161979 |
97 | NC_003065 | AGGGC | 2 | 10 | 147656 | 147665 | 20 % | 0 % | 60 % | 20 % | 16119946 |
98 | NC_003065 | TATCG | 2 | 10 | 149340 | 149349 | 20 % | 40 % | 20 % | 20 % | 16119948 |
99 | NC_003065 | GGAAT | 2 | 10 | 150168 | 150177 | 40 % | 20 % | 40 % | 0 % | 16119949 |
100 | NC_003065 | TGAAC | 2 | 10 | 150472 | 150481 | 40 % | 20 % | 20 % | 20 % | 16119949 |
101 | NC_003065 | TCGCG | 2 | 10 | 151252 | 151261 | 0 % | 20 % | 40 % | 40 % | 159161981 |
102 | NC_003065 | GAGGC | 2 | 10 | 156798 | 156807 | 20 % | 0 % | 60 % | 20 % | 159161982 |
103 | NC_003065 | GGTGC | 2 | 10 | 157259 | 157268 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
104 | NC_003065 | TCAAC | 2 | 10 | 157471 | 157480 | 40 % | 20 % | 0 % | 40 % | 159161984 |
105 | NC_003065 | GAGGG | 2 | 10 | 157867 | 157876 | 20 % | 0 % | 80 % | 0 % | 159161984 |
106 | NC_003065 | ATCCT | 2 | 10 | 160337 | 160346 | 20 % | 40 % | 0 % | 40 % | 159161985 |
107 | NC_003065 | CGTTG | 2 | 10 | 161437 | 161446 | 0 % | 40 % | 40 % | 20 % | 16119959 |
108 | NC_003065 | GCTTC | 2 | 10 | 168767 | 168776 | 0 % | 40 % | 20 % | 40 % | 16119967 |
109 | NC_003065 | CCGTT | 2 | 10 | 169148 | 169157 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
110 | NC_003065 | GAACC | 2 | 10 | 169816 | 169825 | 40 % | 0 % | 20 % | 40 % | 16119968 |
111 | NC_003065 | ACCCA | 2 | 10 | 170829 | 170838 | 40 % | 0 % | 0 % | 60 % | 159161990 |
112 | NC_003065 | CGAGC | 2 | 10 | 173371 | 173380 | 20 % | 0 % | 40 % | 40 % | 16119971 |
113 | NC_003065 | CATCG | 2 | 10 | 173462 | 173471 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
114 | NC_003065 | CAGCA | 2 | 10 | 177500 | 177509 | 40 % | 0 % | 20 % | 40 % | 16119976 |
115 | NC_003065 | GGCTT | 2 | 10 | 177834 | 177843 | 0 % | 40 % | 40 % | 20 % | 16119976 |
116 | NC_003065 | AGATG | 2 | 10 | 179975 | 179984 | 40 % | 20 % | 40 % | 0 % | 41223351 |
117 | NC_003065 | GCATA | 2 | 10 | 180537 | 180546 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
118 | NC_003065 | TTGCA | 2 | 10 | 182491 | 182500 | 20 % | 40 % | 20 % | 20 % | 16119781 |
119 | NC_003065 | ATGAC | 2 | 10 | 183247 | 183256 | 40 % | 20 % | 20 % | 20 % | 16119781 |
120 | NC_003065 | GAGCA | 2 | 10 | 186655 | 186664 | 40 % | 0 % | 40 % | 20 % | 16119786 |
121 | NC_003065 | AGGTC | 2 | 10 | 188438 | 188447 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
122 | NC_003065 | TCGCT | 2 | 10 | 189314 | 189323 | 0 % | 40 % | 20 % | 40 % | 41223308 |
123 | NC_003065 | TCAGC | 2 | 10 | 189505 | 189514 | 20 % | 20 % | 20 % | 40 % | 159161998 |
124 | NC_003065 | CCATG | 2 | 10 | 191880 | 191889 | 20 % | 20 % | 20 % | 40 % | 16119792 |
125 | NC_003065 | GATAC | 2 | 10 | 192281 | 192290 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
126 | NC_003065 | GCTGG | 2 | 10 | 192944 | 192953 | 0 % | 20 % | 60 % | 20 % | 41223310 |
127 | NC_003065 | GACCG | 2 | 10 | 192999 | 193008 | 20 % | 0 % | 40 % | 40 % | 41223310 |
128 | NC_003065 | AGGGG | 2 | 10 | 198771 | 198780 | 20 % | 0 % | 80 % | 0 % | 159162000 |
129 | NC_003065 | GGATT | 2 | 10 | 199844 | 199853 | 20 % | 40 % | 40 % | 0 % | 159162000 |
130 | NC_003065 | TCGAT | 2 | 10 | 201697 | 201706 | 20 % | 40 % | 20 % | 20 % | 41223312 |
131 | NC_003065 | TAATC | 2 | 10 | 202160 | 202169 | 40 % | 40 % | 0 % | 20 % | 16119801 |
132 | NC_003065 | TGGGC | 2 | 10 | 205985 | 205994 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
133 | NC_003065 | AGTCA | 2 | 10 | 206491 | 206500 | 40 % | 20 % | 20 % | 20 % | 16119805 |
134 | NC_003065 | GACAA | 2 | 10 | 206626 | 206635 | 60 % | 0 % | 20 % | 20 % | 16119805 |
135 | NC_003065 | CGCAG | 2 | 10 | 207788 | 207797 | 20 % | 0 % | 40 % | 40 % | 16119805 |
136 | NC_003065 | GATCG | 2 | 10 | 213193 | 213202 | 20 % | 20 % | 40 % | 20 % | 16119811 |
137 | NC_003065 | CATCG | 2 | 10 | 213696 | 213705 | 20 % | 20 % | 20 % | 40 % | 16119812 |