MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Agrobacterium fabrum str. C58 chromosome circular

Total Repeats: 82

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_003062	ATCCGG	2	12	61665	61676	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
2	NC_003062	CGATTG	2	12	70892	70903	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
3	NC_003062	CAAGCG	2	12	81985	81996	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_003062	CTTTTT	2	12	82159	82170	0 %	83.33 %	0 %	16.67 %	Non-Coding
5	NC_003062	CCGTTC	2	12	91493	91504	0 %	33.33 %	16.67 %	50 %	Non-Coding
6	NC_003062	TTTTTG	2	12	110374	110385	0 %	83.33 %	16.67 %	0 %	Non-Coding
7	NC_003062	ACTGGA	2	12	189372	189383	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
8	NC_003062	TGTTTC	2	12	200206	200217	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
9	NC_003062	TTCTCC	2	12	263119	263130	0 %	50 %	0 %	50 %	Non-Coding
10	NC_003062	ATTTTT	2	12	316992	317003	16.67 %	83.33 %	0 %	0 %	Non-Coding
11	NC_003062	GGACAG	2	12	436269	436280	33.33 %	0 %	50 %	16.67 %	Non-Coding
12	NC_003062	TCATCT	2	12	436932	436943	16.67 %	50 %	0 %	33.33 %	Non-Coding
13	NC_003062	GCTTTC	2	12	438192	438203	0 %	50 %	16.67 %	33.33 %	Non-Coding
14	NC_003062	GGCGCG	2	12	480075	480086	0 %	0 %	66.67 %	33.33 %	Non-Coding
15	NC_003062	TACATT	2	12	594647	594658	33.33 %	50 %	0 %	16.67 %	Non-Coding
16	NC_003062	CCTTTG	2	12	622581	622592	0 %	50 %	16.67 %	33.33 %	Non-Coding
17	NC_003062	AGCGGG	2	12	768525	768536	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
18	NC_003062	CGATGC	2	12	851928	851939	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
19	NC_003062	ATCAAA	2	12	866940	866951	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
20	NC_003062	TATTTG	2	12	887172	887183	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
21	NC_003062	ATAACC	2	12	951600	951611	50 %	16.67 %	0 %	33.33 %	Non-Coding
22	NC_003062	TTTTCA	2	12	965952	965963	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
23	NC_003062	GCAAAA	2	12	981721	981732	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
24	NC_003062	TGCCGA	2	12	997865	997876	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
25	NC_003062	TGCGGC	2	12	1005317	1005328	0 %	16.67 %	50 %	33.33 %	Non-Coding
26	NC_003062	CCTTTG	2	12	1076186	1076197	0 %	50 %	16.67 %	33.33 %	Non-Coding
27	NC_003062	ACCTGC	2	12	1094718	1094729	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
28	NC_003062	CATATG	2	12	1130917	1130928	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
29	NC_003062	ATGCGA	2	12	1156749	1156760	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
30	NC_003062	CGTGAC	2	12	1170167	1170178	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
31	NC_003062	ACGGCA	2	12	1176123	1176134	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_003062	AAGCTA	2	12	1275444	1275455	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
33	NC_003062	AGGGGC	2	12	1288783	1288794	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
34	NC_003062	TCACGG	2	12	1351771	1351782	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
35	NC_003062	GGGAAA	2	12	1424695	1424706	50 %	0 %	50 %	0 %	Non-Coding
36	NC_003062	ACATAA	2	12	1456239	1456250	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
37	NC_003062	GCAAAG	2	12	1512958	1512969	50 %	0 %	33.33 %	16.67 %	Non-Coding
38	NC_003062	GGGTTG	2	12	1550957	1550968	0 %	33.33 %	66.67 %	0 %	Non-Coding
39	NC_003062	TCTGCC	2	12	1599778	1599789	0 %	33.33 %	16.67 %	50 %	Non-Coding
40	NC_003062	ATCCCG	2	12	1602430	1602441	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
41	NC_003062	CAACGT	2	12	1666898	1666909	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
42	NC_003062	TGAGGA	2	12	1669410	1669421	33.33 %	16.67 %	50 %	0 %	Non-Coding
43	NC_003062	GCCAGC	2	12	1675290	1675301	16.67 %	0 %	33.33 %	50 %	Non-Coding
44	NC_003062	ATCCCT	2	12	1675391	1675402	16.67 %	33.33 %	0 %	50 %	Non-Coding
45	NC_003062	AAGTTT	2	12	1727334	1727345	33.33 %	50 %	16.67 %	0 %	Non-Coding
46	NC_003062	CCGTCT	2	12	1743016	1743027	0 %	33.33 %	16.67 %	50 %	Non-Coding
47	NC_003062	TTTCAT	2	12	1743227	1743238	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
48	NC_003062	ACAGAC	2	12	1748228	1748239	50 %	0 %	16.67 %	33.33 %	Non-Coding
49	NC_003062	ACCGCG	2	12	1825977	1825988	16.67 %	0 %	33.33 %	50 %	Non-Coding
50	NC_003062	CAAAAC	2	12	1849647	1849658	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_003062	CTGTCA	2	12	1897409	1897420	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
52	NC_003062	GTGAGT	2	12	1915893	1915904	16.67 %	33.33 %	50 %	0 %	Non-Coding
53	NC_003062	TTTGCC	2	12	1932599	1932610	0 %	50 %	16.67 %	33.33 %	Non-Coding
54	NC_003062	CAGGCA	2	12	1932686	1932697	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NC_003062	GCTTTG	2	12	1995817	1995828	0 %	50 %	33.33 %	16.67 %	Non-Coding
56	NC_003062	GAAAAA	2	12	2008413	2008424	83.33 %	0 %	16.67 %	0 %	Non-Coding
57	NC_003062	GTAATT	2	12	2019122	2019133	33.33 %	50 %	16.67 %	0 %	Non-Coding
58	NC_003062	TTCGAT	2	12	2025853	2025864	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
59	NC_003062	CGGCAA	2	12	2034768	2034779	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_003062	ATGTCG	2	12	2089360	2089371	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
61	NC_003062	CGGCAC	2	12	2172439	2172450	16.67 %	0 %	33.33 %	50 %	Non-Coding
62	NC_003062	TCTCCG	2	12	2231181	2231192	0 %	33.33 %	16.67 %	50 %	Non-Coding
63	NC_003062	AGCGTC	2	12	2233704	2233715	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
64	NC_003062	TGGCGA	2	12	2286450	2286461	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
65	NC_003062	CAAGAC	2	12	2286661	2286672	50 %	0 %	16.67 %	33.33 %	Non-Coding
66	NC_003062	CATCCG	2	12	2303611	2303622	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
67	NC_003062	TTTTTA	2	12	2325596	2325607	16.67 %	83.33 %	0 %	0 %	Non-Coding
68	NC_003062	GATTCC	2	12	2330165	2330176	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
69	NC_003062	GCCCTG	2	12	2396125	2396136	0 %	16.67 %	33.33 %	50 %	Non-Coding
70	NC_003062	AAACCC	2	12	2420275	2420286	50 %	0 %	0 %	50 %	Non-Coding
71	NC_003062	ACCGCC	2	12	2462467	2462478	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
72	NC_003062	CCTGTA	2	12	2494052	2494063	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
73	NC_003062	CCGGAT	2	12	2513694	2513705	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
74	NC_003062	ATCAAC	2	12	2530266	2530277	50 %	16.67 %	0 %	33.33 %	Non-Coding
75	NC_003062	GAACTC	2	12	2568653	2568664	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
76	NC_003062	ACGTAA	2	12	2625904	2625915	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
77	NC_003062	GCGCTG	2	12	2673760	2673771	0 %	16.67 %	50 %	33.33 %	Non-Coding
78	NC_003062	GATGGC	2	12	2737932	2737943	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
79	NC_003062	AGCGGC	2	12	2757732	2757743	16.67 %	0 %	50 %	33.33 %	Non-Coding
80	NC_003062	TTGTTT	2	12	2773666	2773677	0 %	83.33 %	16.67 %	0 %	Non-Coding
81	NC_003062	GAAGCG	2	12	2781585	2781596	33.33 %	0 %	50 %	16.67 %	Non-Coding
82	NC_003062	CCCTTA	2	12	2810175	2810186	16.67 %	33.33 %	0 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.