MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Methylococcus capsulatus str. Bath chromosome

Total Repeats: 125

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_002977	CGCTTC	2	12	40823	40834	0 %	33.33 %	16.67 %	50 %	Non-Coding
2	NC_002977	GGGTCA	2	12	58655	58666	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
3	NC_002977	CAGCCG	2	12	60894	60905	16.67 %	0 %	33.33 %	50 %	Non-Coding
4	NC_002977	GTCCCA	2	12	130703	130714	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
5	NC_002977	GCTCGT	2	12	172026	172037	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6	NC_002977	CCGATG	2	12	192921	192932	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
7	NC_002977	CTTGCC	2	12	201141	201152	0 %	33.33 %	16.67 %	50 %	Non-Coding
8	NC_002977	CGATGC	2	12	203059	203070	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
9	NC_002977	GGACGG	2	12	207757	207768	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
10	NC_002977	GGATGC	2	12	211274	211285	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
11	NC_002977	GTTTTC	2	12	223818	223829	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
12	NC_002977	AGGACG	2	12	238063	238074	33.33 %	0 %	50 %	16.67 %	Non-Coding
13	NC_002977	AGTGAC	2	12	304949	304960	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
14	NC_002977	TTCCCT	2	12	305227	305238	0 %	50 %	0 %	50 %	Non-Coding
15	NC_002977	GAAGAC	2	12	359063	359074	50 %	0 %	33.33 %	16.67 %	Non-Coding
16	NC_002977	GCTGAC	2	12	363815	363826	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
17	NC_002977	GCCGGC	2	12	364176	364187	0 %	0 %	50 %	50 %	Non-Coding
18	NC_002977	CGTGGT	2	12	364205	364216	0 %	33.33 %	50 %	16.67 %	Non-Coding
19	NC_002977	GAATCC	2	12	407347	407358	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
20	NC_002977	CGGCGA	2	12	436234	436245	16.67 %	0 %	50 %	33.33 %	Non-Coding
21	NC_002977	GACGGG	2	12	450491	450502	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
22	NC_002977	CCGCCT	2	12	462085	462096	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
23	NC_002977	GCCGGT	2	12	473099	473110	0 %	16.67 %	50 %	33.33 %	Non-Coding
24	NC_002977	ACGGCC	2	12	513128	513139	16.67 %	0 %	33.33 %	50 %	Non-Coding
25	NC_002977	ATGCCG	2	12	515527	515538	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
26	NC_002977	CCCTCT	2	12	518954	518965	0 %	33.33 %	0 %	66.67 %	Non-Coding
27	NC_002977	ACCCCG	2	12	534763	534774	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
28	NC_002977	TGGCTG	2	12	564801	564812	0 %	33.33 %	50 %	16.67 %	Non-Coding
29	NC_002977	GCGCCC	2	12	570450	570461	0 %	0 %	33.33 %	66.67 %	Non-Coding
30	NC_002977	TCGCGG	2	12	610246	610257	0 %	16.67 %	50 %	33.33 %	Non-Coding
31	NC_002977	AGGCAC	2	12	646508	646519	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_002977	CGCCTG	2	12	681088	681099	0 %	16.67 %	33.33 %	50 %	Non-Coding
33	NC_002977	CCCGGC	2	12	702208	702219	0 %	0 %	33.33 %	66.67 %	Non-Coding
34	NC_002977	AAAAAG	2	12	731650	731661	83.33 %	0 %	16.67 %	0 %	Non-Coding
35	NC_002977	CCTTTT	2	12	745790	745801	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_002977	CCACCG	2	12	774773	774784	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
37	NC_002977	GCGTTC	2	12	776727	776738	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
38	NC_002977	AGCTCG	2	12	793154	793165	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
39	NC_002977	GTTCAG	2	12	816376	816387	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
40	NC_002977	TCGCTT	2	12	841459	841470	0 %	50 %	16.67 %	33.33 %	Non-Coding
41	NC_002977	CCCTCT	2	12	878515	878526	0 %	33.33 %	0 %	66.67 %	Non-Coding
42	NC_002977	GGACCG	2	12	899331	899342	16.67 %	0 %	50 %	33.33 %	Non-Coding
43	NC_002977	TGGTCG	2	12	930507	930518	0 %	33.33 %	50 %	16.67 %	Non-Coding
44	NC_002977	GCAAGG	2	12	935598	935609	33.33 %	0 %	50 %	16.67 %	Non-Coding
45	NC_002977	CCCTCA	2	12	935667	935678	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
46	NC_002977	TGGTCG	2	12	942030	942041	0 %	33.33 %	50 %	16.67 %	Non-Coding
47	NC_002977	CCCTGC	2	12	950862	950873	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
48	NC_002977	GCCGGG	2	12	954321	954332	0 %	0 %	66.67 %	33.33 %	Non-Coding
49	NC_002977	TCATCG	2	12	1017975	1017986	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
50	NC_002977	CGTCGG	2	12	1088338	1088349	0 %	16.67 %	50 %	33.33 %	Non-Coding
51	NC_002977	CCGCAG	2	12	1134465	1134476	16.67 %	0 %	33.33 %	50 %	Non-Coding
52	NC_002977	TGTCCC	2	12	1135397	1135408	0 %	33.33 %	16.67 %	50 %	Non-Coding
53	NC_002977	CGGGAT	2	12	1143149	1143160	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
54	NC_002977	CATCCC	2	12	1181422	1181433	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
55	NC_002977	TCCCTC	2	12	1181628	1181639	0 %	33.33 %	0 %	66.67 %	Non-Coding
56	NC_002977	GCTCGC	2	12	1235482	1235493	0 %	16.67 %	33.33 %	50 %	Non-Coding
57	NC_002977	ACAGTT	2	12	1280491	1280502	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
58	NC_002977	TTGCCG	2	12	1289562	1289573	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
59	NC_002977	GGCCCA	2	12	1290074	1290085	16.67 %	0 %	33.33 %	50 %	Non-Coding
60	NC_002977	TTCGCC	2	12	1304365	1304376	0 %	33.33 %	16.67 %	50 %	Non-Coding
61	NC_002977	CGGCCC	2	12	1389410	1389421	0 %	0 %	33.33 %	66.67 %	Non-Coding
62	NC_002977	CAGGAG	2	12	1484139	1484150	33.33 %	0 %	50 %	16.67 %	Non-Coding
63	NC_002977	CCTGGT	2	12	1533937	1533948	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
64	NC_002977	GAAAGG	2	12	1535329	1535340	50 %	0 %	50 %	0 %	Non-Coding
65	NC_002977	TTGGTG	2	12	1541447	1541458	0 %	50 %	50 %	0 %	Non-Coding
66	NC_002977	ATCAGC	2	12	1551903	1551914	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
67	NC_002977	TTCCTG	2	12	1566661	1566672	0 %	50 %	16.67 %	33.33 %	Non-Coding
68	NC_002977	CCAAAG	2	12	1591755	1591766	50 %	0 %	16.67 %	33.33 %	Non-Coding
69	NC_002977	TTCATC	2	12	1591774	1591785	16.67 %	50 %	0 %	33.33 %	Non-Coding
70	NC_002977	CTGATG	2	12	1605968	1605979	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
71	NC_002977	GCCGAC	2	12	1698104	1698115	16.67 %	0 %	33.33 %	50 %	Non-Coding
72	NC_002977	GCCGTG	2	12	1713757	1713768	0 %	16.67 %	50 %	33.33 %	Non-Coding
73	NC_002977	CCCTCG	2	12	1717942	1717953	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
74	NC_002977	TCGACC	2	12	1718080	1718091	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
75	NC_002977	TCAGCT	2	12	1733427	1733438	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
76	NC_002977	CGGTGG	2	12	1751436	1751447	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
77	NC_002977	TCTTGT	2	12	1753013	1753024	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
78	NC_002977	TTGCCC	2	12	1784287	1784298	0 %	33.33 %	16.67 %	50 %	Non-Coding
79	NC_002977	GTCCGC	2	12	1860568	1860579	0 %	16.67 %	33.33 %	50 %	Non-Coding
80	NC_002977	GGTAGT	2	12	1891249	1891260	16.67 %	33.33 %	50 %	0 %	Non-Coding
81	NC_002977	ATGCGC	2	12	1945039	1945050	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
82	NC_002977	TCCCGG	2	12	1955616	1955627	0 %	16.67 %	33.33 %	50 %	Non-Coding
83	NC_002977	CCTGGA	2	12	2006949	2006960	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
84	NC_002977	CGAAGC	3	18	2055163	2055180	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
85	NC_002977	CGTCGG	2	12	2106768	2106779	0 %	16.67 %	50 %	33.33 %	Non-Coding
86	NC_002977	CCTCGC	2	12	2123224	2123235	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
87	NC_002977	ATTTCG	2	12	2195691	2195702	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
88	NC_002977	CGTTGT	2	12	2300633	2300644	0 %	50 %	33.33 %	16.67 %	Non-Coding
89	NC_002977	GGATCG	2	12	2305764	2305775	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
90	NC_002977	TCTATC	2	12	2320671	2320682	16.67 %	50 %	0 %	33.33 %	Non-Coding
91	NC_002977	CACCGG	2	12	2341394	2341405	16.67 %	0 %	33.33 %	50 %	Non-Coding
92	NC_002977	CGGCGC	2	12	2343447	2343458	0 %	0 %	50 %	50 %	Non-Coding
93	NC_002977	CCGAGC	2	12	2354029	2354040	16.67 %	0 %	33.33 %	50 %	Non-Coding
94	NC_002977	TTCTGG	2	12	2363371	2363382	0 %	50 %	33.33 %	16.67 %	Non-Coding
95	NC_002977	CTCGCC	2	12	2382561	2382572	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
96	NC_002977	CCATCC	2	12	2391489	2391500	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
97	NC_002977	CGAACA	2	12	2396756	2396767	50 %	0 %	16.67 %	33.33 %	Non-Coding
98	NC_002977	CGCAAT	2	12	2402447	2402458	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
99	NC_002977	AGCGGC	2	12	2452439	2452450	16.67 %	0 %	50 %	33.33 %	Non-Coding
100	NC_002977	GATCGG	2	12	2454886	2454897	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
101	NC_002977	CCCTCT	2	12	2475512	2475523	0 %	33.33 %	0 %	66.67 %	Non-Coding
102	NC_002977	ACCGCC	2	12	2480987	2480998	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
103	NC_002977	GGTCCA	2	12	2489372	2489383	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
104	NC_002977	CCCACC	2	12	2533396	2533407	16.67 %	0 %	0 %	83.33 %	Non-Coding
105	NC_002977	TGACGC	2	12	2561777	2561788	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
106	NC_002977	TCCTGC	2	12	2571129	2571140	0 %	33.33 %	16.67 %	50 %	Non-Coding
107	NC_002977	ATCCGC	2	12	2637111	2637122	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
108	NC_002977	TATGGC	2	12	2641863	2641874	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
109	NC_002977	GGCACT	2	12	2654164	2654175	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
110	NC_002977	GCTCCT	2	12	2670444	2670455	0 %	33.33 %	16.67 %	50 %	Non-Coding
111	NC_002977	AAGTAT	2	12	2682398	2682409	50 %	33.33 %	16.67 %	0 %	Non-Coding
112	NC_002977	TCGCAT	2	12	2683689	2683700	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
113	NC_002977	TTTGAA	2	12	2687204	2687215	33.33 %	50 %	16.67 %	0 %	Non-Coding
114	NC_002977	ACCGGC	2	12	2690191	2690202	16.67 %	0 %	33.33 %	50 %	Non-Coding
115	NC_002977	CTCGAA	2	12	2738023	2738034	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
116	NC_002977	CGGCTC	2	12	2794203	2794214	0 %	16.67 %	33.33 %	50 %	Non-Coding
117	NC_002977	GCGGCC	2	12	2803812	2803823	0 %	0 %	50 %	50 %	Non-Coding
118	NC_002977	TTGGCC	2	12	2877404	2877415	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
119	NC_002977	TCGAGC	2	12	2912386	2912397	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
120	NC_002977	GGGAGA	2	12	2927764	2927775	33.33 %	0 %	66.67 %	0 %	Non-Coding
121	NC_002977	TCTCCC	2	12	3088285	3088296	0 %	33.33 %	0 %	66.67 %	Non-Coding
122	NC_002977	CGATGC	2	12	3125181	3125192	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
123	NC_002977	AATTCA	2	12	3162484	3162495	50 %	33.33 %	0 %	16.67 %	Non-Coding
124	NC_002977	CTTTTT	2	12	3221228	3221239	0 %	83.33 %	0 %	16.67 %	Non-Coding
125	NC_002977	GACCGG	2	12	3259655	3259666	16.67 %	0 %	50 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.