MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome

Total Repeats: 141

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_002942	AATGCA	2	12	4257	4268	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
2	NC_002942	TCGAAT	2	12	11109	11120	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
3	NC_002942	TCCGTG	2	12	30448	30459	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
4	NC_002942	GTTTAT	2	12	31706	31717	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
5	NC_002942	CTTATT	2	12	89495	89506	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
6	NC_002942	TTAATA	2	12	135740	135751	50 %	50 %	0 %	0 %	Non-Coding
7	NC_002942	TGTTCT	2	12	185559	185570	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
8	NC_002942	TCAACA	2	12	187891	187902	50 %	16.67 %	0 %	33.33 %	Non-Coding
9	NC_002942	AAATGC	2	12	193983	193994	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
10	NC_002942	TTATTT	2	12	210959	210970	16.67 %	83.33 %	0 %	0 %	Non-Coding
11	NC_002942	TAAAAT	2	12	292880	292891	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_002942	TAGCTT	2	12	304508	304519	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
13	NC_002942	GCCTTG	2	12	310412	310423	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_002942	TGTCCA	2	12	314225	314236	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
15	NC_002942	AAAATC	2	12	316086	316097	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
16	NC_002942	CATTTG	3	18	316727	316744	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
17	NC_002942	CATTTG	2	12	361854	361865	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
18	NC_002942	TGAAAT	2	12	363724	363735	50 %	33.33 %	16.67 %	0 %	Non-Coding
19	NC_002942	AATTTA	2	12	367711	367722	50 %	50 %	0 %	0 %	Non-Coding
20	NC_002942	ATTTTA	2	12	412314	412325	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_002942	CTTGGT	2	12	511685	511696	0 %	50 %	33.33 %	16.67 %	Non-Coding
22	NC_002942	ATTAAA	2	12	512854	512865	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_002942	TTAAAT	2	12	513979	513990	50 %	50 %	0 %	0 %	Non-Coding
24	NC_002942	TAAAAT	2	12	529233	529244	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_002942	ATCCTG	2	12	529789	529800	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
26	NC_002942	TTTTCA	2	12	559392	559403	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
27	NC_002942	AATCAA	2	12	589624	589635	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
28	NC_002942	TTTAAA	2	12	595754	595765	50 %	50 %	0 %	0 %	Non-Coding
29	NC_002942	CATTTG	2	12	610214	610225	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
30	NC_002942	TGAAAT	2	12	612084	612095	50 %	33.33 %	16.67 %	0 %	Non-Coding
31	NC_002942	TAAAAT	2	12	620490	620501	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_002942	ATTTAT	2	12	622986	622997	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_002942	AAAAGG	2	12	672056	672067	66.67 %	0 %	33.33 %	0 %	Non-Coding
34	NC_002942	GGATGG	2	12	688584	688595	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
35	NC_002942	TATGGA	2	12	713327	713338	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
36	NC_002942	AATAGT	2	12	849283	849294	50 %	33.33 %	16.67 %	0 %	Non-Coding
37	NC_002942	AAATGG	2	12	861671	861682	50 %	16.67 %	33.33 %	0 %	Non-Coding
38	NC_002942	TAAAAA	2	12	870569	870580	83.33 %	16.67 %	0 %	0 %	Non-Coding
39	NC_002942	TCCTGT	2	12	913195	913206	0 %	50 %	16.67 %	33.33 %	Non-Coding
40	NC_002942	GCCTGA	2	12	913464	913475	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
41	NC_002942	AAAATT	2	12	978850	978861	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_002942	AAAGAG	2	12	983969	983980	66.67 %	0 %	33.33 %	0 %	Non-Coding
43	NC_002942	TTTCGT	2	12	1001105	1001116	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
44	NC_002942	AAGTGC	2	12	1002349	1002360	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
45	NC_002942	GAAATG	2	12	1002500	1002511	50 %	16.67 %	33.33 %	0 %	Non-Coding
46	NC_002942	TTAAAA	2	12	1055527	1055538	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_002942	ATTTTT	2	12	1065748	1065759	16.67 %	83.33 %	0 %	0 %	Non-Coding
48	NC_002942	AGCATG	2	12	1103058	1103069	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
49	NC_002942	AAAATA	2	12	1125114	1125125	83.33 %	16.67 %	0 %	0 %	Non-Coding
50	NC_002942	GACCAA	2	12	1177745	1177756	50 %	0 %	16.67 %	33.33 %	Non-Coding
51	NC_002942	AATGCG	2	12	1188236	1188247	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
52	NC_002942	ATTTCA	2	12	1189662	1189673	33.33 %	50 %	0 %	16.67 %	Non-Coding
53	NC_002942	AGCGCA	2	12	1204127	1204138	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
54	NC_002942	TGTTTT	2	12	1231440	1231451	0 %	83.33 %	16.67 %	0 %	Non-Coding
55	NC_002942	AATTTT	2	12	1288498	1288509	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_002942	GACTGG	2	12	1299698	1299709	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
57	NC_002942	AAACCA	2	12	1299795	1299806	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_002942	CTTCGT	2	12	1329405	1329416	0 %	50 %	16.67 %	33.33 %	Non-Coding
59	NC_002942	TTTTAT	2	12	1334273	1334284	16.67 %	83.33 %	0 %	0 %	Non-Coding
60	NC_002942	AATTTT	2	12	1362607	1362618	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_002942	GTTTAT	2	12	1364222	1364233	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
62	NC_002942	AATTTT	2	12	1399912	1399923	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_002942	GACTTT	2	12	1401085	1401096	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
64	NC_002942	TGCAAT	2	12	1402987	1402998	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
65	NC_002942	GAAAAA	2	12	1418530	1418541	83.33 %	0 %	16.67 %	0 %	Non-Coding
66	NC_002942	ATCATT	2	12	1463597	1463608	33.33 %	50 %	0 %	16.67 %	Non-Coding
67	NC_002942	AAATTG	2	12	1473031	1473042	50 %	33.33 %	16.67 %	0 %	Non-Coding
68	NC_002942	AAAATA	2	12	1475549	1475560	83.33 %	16.67 %	0 %	0 %	Non-Coding
69	NC_002942	TATTTG	2	12	1500655	1500666	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
70	NC_002942	TAAAAA	2	12	1504899	1504910	83.33 %	16.67 %	0 %	0 %	Non-Coding
71	NC_002942	TTAAAA	2	12	1509133	1509144	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_002942	TAAAAA	2	12	1513063	1513074	83.33 %	16.67 %	0 %	0 %	Non-Coding
73	NC_002942	TTTTTA	2	12	1516860	1516871	16.67 %	83.33 %	0 %	0 %	Non-Coding
74	NC_002942	AATCAT	2	12	1537059	1537070	50 %	33.33 %	0 %	16.67 %	Non-Coding
75	NC_002942	TTGATA	2	12	1599595	1599606	33.33 %	50 %	16.67 %	0 %	Non-Coding
76	NC_002942	TAATGC	2	12	1637184	1637195	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
77	NC_002942	GATATT	2	12	1656817	1656828	33.33 %	50 %	16.67 %	0 %	Non-Coding
78	NC_002942	AATATT	2	12	1680052	1680063	50 %	50 %	0 %	0 %	Non-Coding
79	NC_002942	AAAATT	2	12	1695653	1695664	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_002942	TCATTA	2	12	1733325	1733336	33.33 %	50 %	0 %	16.67 %	Non-Coding
81	NC_002942	TATTTT	2	12	1752605	1752616	16.67 %	83.33 %	0 %	0 %	Non-Coding
82	NC_002942	ATCCAT	2	12	1768393	1768404	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
83	NC_002942	AAAAAT	2	12	1839324	1839335	83.33 %	16.67 %	0 %	0 %	Non-Coding
84	NC_002942	AGACTT	2	12	1856613	1856624	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
85	NC_002942	ATCAAC	2	12	1872072	1872083	50 %	16.67 %	0 %	33.33 %	Non-Coding
86	NC_002942	TGGCCT	2	12	2013572	2013583	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
87	NC_002942	AAAAAT	2	12	2031703	2031714	83.33 %	16.67 %	0 %	0 %	Non-Coding
88	NC_002942	TCAAAA	2	12	2068574	2068585	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
89	NC_002942	CTTTTT	2	12	2073523	2073534	0 %	83.33 %	0 %	16.67 %	Non-Coding
90	NC_002942	ATTTAG	2	12	2077173	2077184	33.33 %	50 %	16.67 %	0 %	Non-Coding
91	NC_002942	ACTTTT	2	12	2097593	2097604	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
92	NC_002942	GGACCT	2	12	2099287	2099298	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
93	NC_002942	TTGCAT	2	12	2208106	2208117	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
94	NC_002942	CAGCCC	2	12	2208291	2208302	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
95	NC_002942	TGTAAT	2	12	2230306	2230317	33.33 %	50 %	16.67 %	0 %	Non-Coding
96	NC_002942	TTAATT	2	12	2265956	2265967	33.33 %	66.67 %	0 %	0 %	Non-Coding
97	NC_002942	AATTAT	2	12	2351746	2351757	50 %	50 %	0 %	0 %	Non-Coding
98	NC_002942	AAGAAA	2	12	2356749	2356760	83.33 %	0 %	16.67 %	0 %	Non-Coding
99	NC_002942	TCAAAT	2	12	2360740	2360751	50 %	33.33 %	0 %	16.67 %	Non-Coding
100	NC_002942	TATTCA	2	12	2386043	2386054	33.33 %	50 %	0 %	16.67 %	Non-Coding
101	NC_002942	ATTCTG	2	12	2390523	2390534	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
102	NC_002942	AATTTA	2	12	2398559	2398570	50 %	50 %	0 %	0 %	Non-Coding
103	NC_002942	ACTTTG	2	12	2421398	2421409	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
104	NC_002942	CAAGGC	2	12	2423469	2423480	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
105	NC_002942	TTTTAT	2	12	2429010	2429021	16.67 %	83.33 %	0 %	0 %	Non-Coding
106	NC_002942	AGAATA	2	12	2430108	2430119	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
107	NC_002942	ATTTTA	2	12	2497161	2497172	33.33 %	66.67 %	0 %	0 %	Non-Coding
108	NC_002942	CCTTGT	2	12	2525241	2525252	0 %	50 %	16.67 %	33.33 %	Non-Coding
109	NC_002942	CAAAGA	2	12	2532829	2532840	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
110	NC_002942	AAATGA	2	12	2558353	2558364	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
111	NC_002942	TAAAAA	2	12	2598037	2598048	83.33 %	16.67 %	0 %	0 %	Non-Coding
112	NC_002942	CTTTTT	2	12	2631640	2631651	0 %	83.33 %	0 %	16.67 %	Non-Coding
113	NC_002942	TCTTAT	2	12	2669393	2669404	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
114	NC_002942	AAATTA	2	12	2679167	2679178	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_002942	GTTAAG	2	12	2680728	2680739	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
116	NC_002942	TATTTC	2	12	2700733	2700744	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
117	NC_002942	TTAGTC	2	12	2737309	2737320	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
118	NC_002942	ACAAAT	2	12	2762903	2762914	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
119	NC_002942	CATAAA	2	12	2795255	2795266	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
120	NC_002942	TTTTTA	2	12	2799878	2799889	16.67 %	83.33 %	0 %	0 %	Non-Coding
121	NC_002942	TGAATT	2	12	2845916	2845927	33.33 %	50 %	16.67 %	0 %	Non-Coding
122	NC_002942	CATAGA	2	12	2858074	2858085	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
123	NC_002942	AGAAAC	2	12	2889847	2889858	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
124	NC_002942	ATATGG	2	12	2898093	2898104	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
125	NC_002942	TTTATA	2	12	2898181	2898192	33.33 %	66.67 %	0 %	0 %	Non-Coding
126	NC_002942	GAATAA	2	12	2962846	2962857	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
127	NC_002942	TTCTGA	2	12	3055985	3055996	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
128	NC_002942	ATAAAA	2	12	3063258	3063269	83.33 %	16.67 %	0 %	0 %	Non-Coding
129	NC_002942	ATTTCA	2	12	3098815	3098826	33.33 %	50 %	0 %	16.67 %	Non-Coding
130	NC_002942	CAAATG	2	12	3100685	3100696	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
131	NC_002942	TTATTT	2	12	3141703	3141714	16.67 %	83.33 %	0 %	0 %	Non-Coding
132	NC_002942	CAAGGT	2	12	3192917	3192928	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
133	NC_002942	CAAGGT	2	12	3264014	3264025	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
134	NC_002942	GGAATT	2	12	3275850	3275861	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
135	NC_002942	AATTAT	2	12	3282278	3282289	50 %	50 %	0 %	0 %	Non-Coding
136	NC_002942	TTTAAA	2	12	3296862	3296873	50 %	50 %	0 %	0 %	Non-Coding
137	NC_002942	TCAACA	2	12	3317050	3317061	50 %	16.67 %	0 %	33.33 %	Non-Coding
138	NC_002942	TAAAAA	2	12	3321007	3321018	83.33 %	16.67 %	0 %	0 %	Non-Coding
139	NC_002942	TACTGA	2	12	3327696	3327707	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
140	NC_002942	CTTATT	2	12	3361903	3361914	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
141	NC_002942	AAATCA	2	12	3397459	3397470	66.67 %	16.67 %	0 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.