MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlorobium tepidum TLS chromosome

Total Repeats: 79

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_002932	AGCGCC	2	12	67195	67206	16.67 %	0 %	33.33 %	50 %	Non-Coding
2	NC_002932	AATGGT	2	12	68038	68049	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_002932	CGTTGC	2	12	123185	123196	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
4	NC_002932	ATTTTT	2	12	151936	151947	16.67 %	83.33 %	0 %	0 %	Non-Coding
5	NC_002932	AATAAA	2	12	182617	182628	83.33 %	16.67 %	0 %	0 %	Non-Coding
6	NC_002932	ATCATT	2	12	203892	203903	33.33 %	50 %	0 %	16.67 %	Non-Coding
7	NC_002932	TATGAA	2	12	226967	226978	50 %	33.33 %	16.67 %	0 %	Non-Coding
8	NC_002932	ATCCCG	3	18	234026	234043	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
9	NC_002932	AGGAAG	2	12	240780	240791	50 %	0 %	50 %	0 %	Non-Coding
10	NC_002932	GATGAG	2	12	302759	302770	33.33 %	16.67 %	50 %	0 %	Non-Coding
11	NC_002932	AAAAAC	2	12	371172	371183	83.33 %	0 %	0 %	16.67 %	Non-Coding
12	NC_002932	TTCGGC	2	12	440074	440085	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13	NC_002932	CTTCTG	2	12	446399	446410	0 %	50 %	16.67 %	33.33 %	Non-Coding
14	NC_002932	CCTGCG	2	12	449733	449744	0 %	16.67 %	33.33 %	50 %	Non-Coding
15	NC_002932	TGCCGA	2	12	473049	473060	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
16	NC_002932	ATTCCC	2	12	482518	482529	16.67 %	33.33 %	0 %	50 %	Non-Coding
17	NC_002932	CTGATG	2	12	526245	526256	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
18	NC_002932	TTTCCG	2	12	528405	528416	0 %	50 %	16.67 %	33.33 %	Non-Coding
19	NC_002932	CAATCA	2	12	546550	546561	50 %	16.67 %	0 %	33.33 %	Non-Coding
20	NC_002932	CGAGCC	2	12	558599	558610	16.67 %	0 %	33.33 %	50 %	Non-Coding
21	NC_002932	CATATT	2	12	620909	620920	33.33 %	50 %	0 %	16.67 %	Non-Coding
22	NC_002932	GACCTC	2	12	623762	623773	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
23	NC_002932	TTTTCT	2	12	661023	661034	0 %	83.33 %	0 %	16.67 %	Non-Coding
24	NC_002932	TGATCA	2	12	786394	786405	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
25	NC_002932	TTGCTT	2	12	807561	807572	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
26	NC_002932	GGTCGA	2	12	830036	830047	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
27	NC_002932	GTTCGT	2	12	830117	830128	0 %	50 %	33.33 %	16.67 %	Non-Coding
28	NC_002932	GGTTTT	2	12	938466	938477	0 %	66.67 %	33.33 %	0 %	Non-Coding
29	NC_002932	CTCCAT	2	12	1052054	1052065	16.67 %	33.33 %	0 %	50 %	Non-Coding
30	NC_002932	AGGCAA	2	12	1131630	1131641	50 %	0 %	33.33 %	16.67 %	Non-Coding
31	NC_002932	AACGAA	2	12	1133732	1133743	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
32	NC_002932	TGAATC	2	12	1138594	1138605	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
33	NC_002932	CGAAAC	2	12	1150435	1150446	50 %	0 %	16.67 %	33.33 %	Non-Coding
34	NC_002932	ATCATG	2	12	1154027	1154038	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
35	NC_002932	TGGCCA	2	12	1154754	1154765	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
36	NC_002932	TCGTTT	2	12	1208914	1208925	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
37	NC_002932	TTTTCG	2	12	1229786	1229797	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
38	NC_002932	TTGATT	2	12	1251232	1251243	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
39	NC_002932	CAACTC	2	12	1271877	1271888	33.33 %	16.67 %	0 %	50 %	Non-Coding
40	NC_002932	ATAGCA	2	12	1272114	1272125	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
41	NC_002932	TGATGG	2	12	1292548	1292559	16.67 %	33.33 %	50 %	0 %	Non-Coding
42	NC_002932	AAAAGC	2	12	1302549	1302560	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
43	NC_002932	GCTTTT	2	12	1302584	1302595	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
44	NC_002932	CGGAGC	2	12	1302934	1302945	16.67 %	0 %	50 %	33.33 %	Non-Coding
45	NC_002932	CGGCTT	2	12	1303219	1303230	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
46	NC_002932	ACAAAA	2	12	1346545	1346556	83.33 %	0 %	0 %	16.67 %	Non-Coding
47	NC_002932	GCAAAA	2	12	1365877	1365888	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
48	NC_002932	CCACAC	2	12	1373372	1373383	33.33 %	0 %	0 %	66.67 %	Non-Coding
49	NC_002932	CGTTTT	2	12	1402207	1402218	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
50	NC_002932	CCCGAC	2	12	1435585	1435596	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
51	NC_002932	CTCCTG	2	12	1465717	1465728	0 %	33.33 %	16.67 %	50 %	Non-Coding
52	NC_002932	GGATCG	2	12	1488081	1488092	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
53	NC_002932	ACAAAA	2	12	1489052	1489063	83.33 %	0 %	0 %	16.67 %	Non-Coding
54	NC_002932	ATTTAA	2	12	1504145	1504156	50 %	50 %	0 %	0 %	Non-Coding
55	NC_002932	CGATGA	2	12	1554529	1554540	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
56	NC_002932	CGACCG	2	12	1559294	1559305	16.67 %	0 %	33.33 %	50 %	Non-Coding
57	NC_002932	AAATCG	2	12	1601895	1601906	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
58	NC_002932	GAATCG	2	12	1628823	1628834	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
59	NC_002932	TCTCGG	2	12	1637824	1637835	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
60	NC_002932	CGATTC	2	12	1652376	1652387	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
61	NC_002932	TAAAAA	2	12	1656215	1656226	83.33 %	16.67 %	0 %	0 %	Non-Coding
62	NC_002932	TAACCA	2	12	1707286	1707297	50 %	16.67 %	0 %	33.33 %	Non-Coding
63	NC_002932	CGTTGC	2	12	1721163	1721174	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
64	NC_002932	GCAAAC	2	12	1796776	1796787	50 %	0 %	16.67 %	33.33 %	Non-Coding
65	NC_002932	GGATTC	2	12	1802830	1802841	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
66	NC_002932	GCCATT	2	12	1831023	1831034	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
67	NC_002932	AAAATT	2	12	1835910	1835921	66.67 %	33.33 %	0 %	0 %	Non-Coding
68	NC_002932	TTGCTA	2	12	1868761	1868772	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
69	NC_002932	ACCCCG	2	12	1868827	1868838	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
70	NC_002932	AACAGG	2	12	1878343	1878354	50 %	0 %	33.33 %	16.67 %	Non-Coding
71	NC_002932	AAATCG	2	12	1878498	1878509	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
72	NC_002932	GGATTC	2	12	1912364	1912375	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
73	NC_002932	ACGGCA	2	12	1952735	1952746	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
74	NC_002932	TCAAAA	2	12	1973677	1973688	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
75	NC_002932	AAAATA	2	12	2041209	2041220	83.33 %	16.67 %	0 %	0 %	Non-Coding
76	NC_002932	CGATAT	2	12	2113839	2113850	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
77	NC_002932	CGCTTG	2	12	2121381	2121392	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
78	NC_002932	GGCGAA	2	12	2130667	2130678	33.33 %	0 %	50 %	16.67 %	Non-Coding
79	NC_002932	AATGAG	2	12	2133299	2133310	50 %	16.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.