MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Buchnera aphidicola str. APS (Acyrthosiphon pisum) chromosome

Total Repeats: 65

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_002528	AAAATT	2	12	2135	2146	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_002528	ATATTT	2	12	18165	18176	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_002528	TAAAAA	2	12	24803	24814	83.33 %	16.67 %	0 %	0 %	Non-Coding
4	NC_002528	AATATA	2	12	27814	27825	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_002528	ATTAAA	2	12	76919	76930	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_002528	AATTAA	2	12	76967	76978	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_002528	TAAAAT	2	12	87719	87730	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_002528	TTTATA	2	12	87866	87877	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_002528	AAAAAT	2	12	98898	98909	83.33 %	16.67 %	0 %	0 %	Non-Coding
10	NC_002528	TAAAAA	2	12	111421	111432	83.33 %	16.67 %	0 %	0 %	Non-Coding
11	NC_002528	TAAAAA	2	12	127633	127644	83.33 %	16.67 %	0 %	0 %	Non-Coding
12	NC_002528	TTTATT	2	12	143678	143689	16.67 %	83.33 %	0 %	0 %	Non-Coding
13	NC_002528	AAATAA	2	12	143754	143765	83.33 %	16.67 %	0 %	0 %	Non-Coding
14	NC_002528	ATATTT	2	12	180383	180394	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_002528	ATTTTT	2	12	181947	181958	16.67 %	83.33 %	0 %	0 %	Non-Coding
16	NC_002528	AACAAA	2	12	186501	186512	83.33 %	0 %	0 %	16.67 %	Non-Coding
17	NC_002528	ATTACT	2	12	186595	186606	33.33 %	50 %	0 %	16.67 %	Non-Coding
18	NC_002528	ATTTTT	2	12	193186	193197	16.67 %	83.33 %	0 %	0 %	Non-Coding
19	NC_002528	TTATAT	2	12	211710	211721	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_002528	AAAATT	2	12	216192	216203	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_002528	AGAAAA	2	12	229199	229210	83.33 %	0 %	16.67 %	0 %	Non-Coding
22	NC_002528	TTATAT	2	12	231021	231032	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_002528	ATTTTA	2	12	232452	232463	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_002528	TTTAAA	2	12	235176	235187	50 %	50 %	0 %	0 %	Non-Coding
25	NC_002528	ATTTAA	2	12	248321	248332	50 %	50 %	0 %	0 %	Non-Coding
26	NC_002528	TATAAA	2	12	251833	251844	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_002528	AAATAT	2	12	251964	251975	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_002528	AATTAA	2	12	255480	255491	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_002528	AAAAAT	2	12	268204	268215	83.33 %	16.67 %	0 %	0 %	Non-Coding
30	NC_002528	TATTTA	2	12	306370	306381	33.33 %	66.67 %	0 %	0 %	Non-Coding
31	NC_002528	TATTTT	2	12	306543	306554	16.67 %	83.33 %	0 %	0 %	Non-Coding
32	NC_002528	TCATAT	2	12	318877	318888	33.33 %	50 %	0 %	16.67 %	Non-Coding
33	NC_002528	ATTTTT	2	12	330710	330721	16.67 %	83.33 %	0 %	0 %	Non-Coding
34	NC_002528	TAAATA	2	12	330813	330824	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_002528	AATATA	2	12	338018	338029	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_002528	TATAAA	2	12	353123	353134	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_002528	AAATTT	2	12	358279	358290	50 %	50 %	0 %	0 %	Non-Coding
38	NC_002528	ATTTTA	2	12	413842	413853	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_002528	ATAAAA	2	12	440019	440030	83.33 %	16.67 %	0 %	0 %	Non-Coding
40	NC_002528	ATAAAA	2	12	461904	461915	83.33 %	16.67 %	0 %	0 %	Non-Coding
41	NC_002528	ATTTCT	2	12	468789	468800	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
42	NC_002528	TATAAA	2	12	469583	469594	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_002528	CTATTA	2	12	488573	488584	33.33 %	50 %	0 %	16.67 %	Non-Coding
44	NC_002528	TAATTT	2	12	489912	489923	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_002528	TTAAAA	2	12	517859	517870	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_002528	ATCATA	2	12	518320	518331	50 %	33.33 %	0 %	16.67 %	Non-Coding
47	NC_002528	TAATAT	2	12	532323	532334	50 %	50 %	0 %	0 %	Non-Coding
48	NC_002528	ATTTTT	2	12	539202	539213	16.67 %	83.33 %	0 %	0 %	Non-Coding
49	NC_002528	TTGATT	2	12	542170	542181	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
50	NC_002528	TTTAAA	2	12	567109	567120	50 %	50 %	0 %	0 %	Non-Coding
51	NC_002528	ATTTAA	2	12	568752	568763	50 %	50 %	0 %	0 %	Non-Coding
52	NC_002528	ATAAAA	2	12	572057	572068	83.33 %	16.67 %	0 %	0 %	Non-Coding
53	NC_002528	TTTTAT	2	12	572591	572602	16.67 %	83.33 %	0 %	0 %	Non-Coding
54	NC_002528	TATTTT	2	12	574687	574698	16.67 %	83.33 %	0 %	0 %	Non-Coding
55	NC_002528	ATTTTA	2	12	578674	578685	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_002528	AAAGAA	2	12	579373	579384	83.33 %	0 %	16.67 %	0 %	Non-Coding
57	NC_002528	TTTATC	2	12	580518	580529	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
58	NC_002528	AAAATA	2	12	580609	580620	83.33 %	16.67 %	0 %	0 %	Non-Coding
59	NC_002528	ATATAA	2	12	581759	581770	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_002528	TAAAAA	2	12	583492	583503	83.33 %	16.67 %	0 %	0 %	Non-Coding
61	NC_002528	TAAAAT	2	12	583600	583611	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_002528	TAAAAA	2	12	623946	623957	83.33 %	16.67 %	0 %	0 %	Non-Coding
63	NC_002528	CTTTTT	2	12	625231	625242	0 %	83.33 %	0 %	16.67 %	Non-Coding
64	NC_002528	AATATT	2	12	630053	630064	50 %	50 %	0 %	0 %	Non-Coding
65	NC_002528	AAAAAT	2	12	633507	633518	83.33 %	16.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.