MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Coding Repeats of Chlamydia phage CPAR39

Total Repeats: 39

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_002180	TGA	2	6	637	642	33.33 %	33.33 %	33.33 %	0 %	9791178
2	NC_002180	ACC	2	6	680	685	33.33 %	0 %	0 %	66.67 %	9791178
3	NC_002180	AAT	2	6	698	703	66.67 %	33.33 %	0 %	0 %	9791178
4	NC_002180	CTT	2	6	710	715	0 %	66.67 %	0 %	33.33 %	9791178
5	NC_002180	TAT	2	6	959	964	33.33 %	66.67 %	0 %	0 %	9791178
6	NC_002180	AAG	2	6	968	973	66.67 %	0 %	33.33 %	0 %	9791178
7	NC_002180	ATT	2	6	1121	1126	33.33 %	66.67 %	0 %	0 %	9791178
8	NC_002180	TTC	2	6	1189	1194	0 %	66.67 %	0 %	33.33 %	9791178
9	NC_002180	TGC	2	6	1264	1269	0 %	33.33 %	33.33 %	33.33 %	9791178
10	NC_002180	GAA	2	6	1398	1403	66.67 %	0 %	33.33 %	0 %	9791178
11	NC_002180	TGT	3	9	1513	1521	0 %	66.67 %	33.33 %	0 %	9791178
12	NC_002180	CAG	2	6	1640	1645	33.33 %	0 %	33.33 %	33.33 %	9791178
13	NC_002180	GAA	2	6	1682	1687	66.67 %	0 %	33.33 %	0 %	9791178
14	NC_002180	TCC	2	6	1690	1695	0 %	33.33 %	0 %	66.67 %	9791178
15	NC_002180	GTT	2	6	1706	1711	0 %	66.67 %	33.33 %	0 %	9791178
16	NC_002180	AAC	2	6	1932	1937	66.67 %	0 %	0 %	33.33 %	9791177
17	NC_002180	CAG	2	6	1956	1961	33.33 %	0 %	33.33 %	33.33 %	9791177
18	NC_002180	GAA	2	6	2131	2136	66.67 %	0 %	33.33 %	0 %	9791177
19	NC_002180	CTT	2	6	2178	2183	0 %	66.67 %	0 %	33.33 %	9791177
20	NC_002180	AAT	2	6	2210	2215	66.67 %	33.33 %	0 %	0 %	9791177
21	NC_002180	TCT	2	6	2425	2430	0 %	66.67 %	0 %	33.33 %	9791177
22	NC_002180	CAA	2	6	2549	2554	66.67 %	0 %	0 %	33.33 %	9791182
23	NC_002180	CAA	2	6	2557	2562	66.67 %	0 %	0 %	33.33 %	9791182
24	NC_002180	AAC	2	6	2579	2584	66.67 %	0 %	0 %	33.33 %	9791182
25	NC_002180	CGA	2	6	2630	2635	33.33 %	0 %	33.33 %	33.33 %	9791182
26	NC_002180	CGT	2	6	2689	2694	0 %	33.33 %	33.33 %	33.33 %	9791182
27	NC_002180	GAA	2	6	2789	2794	66.67 %	0 %	33.33 %	0 %	9791182
28	NC_002180	GAA	2	6	2801	2806	66.67 %	0 %	33.33 %	0 %	9791182
29	NC_002180	GAT	2	6	2882	2887	33.33 %	33.33 %	33.33 %	0 %	9791182
30	NC_002180	GAA	2	6	3146	3151	66.67 %	0 %	33.33 %	0 %	9791180
31	NC_002180	TGT	2	6	3418	3423	0 %	66.67 %	33.33 %	0 %	9791179
32	NC_002180	AAG	2	6	3514	3519	66.67 %	0 %	33.33 %	0 %	9791179
33	NC_002180	ATC	2	6	3758	3763	33.33 %	33.33 %	0 %	33.33 %	9791179
34	NC_002180	ATC	2	6	3863	3868	33.33 %	33.33 %	0 %	33.33 %	9791179
35	NC_002180	AAG	2	6	3898	3903	66.67 %	0 %	33.33 %	0 %	9791179
36	NC_002180	GAA	2	6	4032	4037	66.67 %	0 %	33.33 %	0 %	9791179
37	NC_002180	TTG	2	6	4169	4174	0 %	66.67 %	33.33 %	0 %	9791179
38	NC_002180	TCC	2	6	4206	4211	0 %	33.33 %	0 %	66.67 %	9791179
39	NC_002180	GAG	3	9	4378	4386	33.33 %	0 %	66.67 %	0 %	9791179

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.