Hexa-nucleotide Repeats of Halobacterium sp. NRC-1 plasmid pNRC100
Total Repeats: 87
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_001869 | GTCACG | 2 | 12 | 733 | 744 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10803548 |
2 | NC_001869 | CTGACG | 2 | 12 | 5447 | 5458 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
3 | NC_001869 | GAATTA | 2 | 12 | 8352 | 8363 | 50 % | 33.33 % | 16.67 % | 0 % | 10803557 |
4 | NC_001869 | ATTACC | 2 | 12 | 9471 | 9482 | 33.33 % | 33.33 % | 0 % | 33.33 % | 10803558 |
5 | NC_001869 | CCGTGA | 2 | 12 | 12608 | 12619 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
6 | NC_001869 | GCTGTC | 2 | 12 | 12772 | 12783 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
7 | NC_001869 | GAAGTC | 2 | 12 | 15040 | 15051 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 10803559 |
8 | NC_001869 | CGACGT | 2 | 12 | 18828 | 18839 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10803567 |
9 | NC_001869 | GAGATC | 2 | 12 | 24705 | 24716 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 10803574 |
10 | NC_001869 | CGACTA | 2 | 12 | 25764 | 25775 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 10803576 |
11 | NC_001869 | ATCCCC | 2 | 12 | 27919 | 27930 | 16.67 % | 16.67 % | 0 % | 66.67 % | 10803577 |
12 | NC_001869 | AGTCGT | 2 | 12 | 29016 | 29027 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 10803577 |
13 | NC_001869 | ACCATC | 2 | 12 | 30062 | 30073 | 33.33 % | 16.67 % | 0 % | 50 % | 10803578 |
14 | NC_001869 | TTCGAC | 2 | 12 | 31150 | 31161 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 10803579 |
15 | NC_001869 | GACAGC | 2 | 12 | 33321 | 33332 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
16 | NC_001869 | ATTTCA | 2 | 12 | 33642 | 33653 | 33.33 % | 50 % | 0 % | 16.67 % | 10803580 |
17 | NC_001869 | TGAGCG | 2 | 12 | 35899 | 35910 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
18 | NC_001869 | ACGGCT | 2 | 12 | 37297 | 37308 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10803583 |
19 | NC_001869 | AAATCC | 2 | 12 | 38148 | 38159 | 50 % | 16.67 % | 0 % | 33.33 % | 10803584 |
20 | NC_001869 | TCGGCC | 2 | 12 | 44831 | 44842 | 0 % | 16.67 % | 33.33 % | 50 % | 10803588 |
21 | NC_001869 | GTCGAA | 2 | 12 | 46245 | 46256 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 10803590 |
22 | NC_001869 | TCCACT | 2 | 12 | 47095 | 47106 | 16.67 % | 33.33 % | 0 % | 50 % | 10803591 |
23 | NC_001869 | TTCGGG | 2 | 12 | 47629 | 47640 | 0 % | 33.33 % | 50 % | 16.67 % | 10803592 |
24 | NC_001869 | CAGCCA | 2 | 12 | 47988 | 47999 | 33.33 % | 0 % | 16.67 % | 50 % | 10803592 |
25 | NC_001869 | CGCGGG | 2 | 12 | 52075 | 52086 | 0 % | 0 % | 66.67 % | 33.33 % | 10803597 |
26 | NC_001869 | TGCGCC | 2 | 12 | 52417 | 52428 | 0 % | 16.67 % | 33.33 % | 50 % | 10803598 |
27 | NC_001869 | CGGGTT | 2 | 12 | 52857 | 52868 | 0 % | 33.33 % | 50 % | 16.67 % | 10803599 |
28 | NC_001869 | TCGGCG | 2 | 12 | 53354 | 53365 | 0 % | 16.67 % | 50 % | 33.33 % | 10803599 |
29 | NC_001869 | GCCATC | 2 | 12 | 53416 | 53427 | 16.67 % | 16.67 % | 16.67 % | 50 % | 10803599 |
30 | NC_001869 | CGTCGC | 2 | 12 | 53628 | 53639 | 0 % | 16.67 % | 33.33 % | 50 % | 10803599 |
31 | NC_001869 | TCGACG | 2 | 12 | 54703 | 54714 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10803601 |
32 | NC_001869 | TCGCGT | 2 | 12 | 56480 | 56491 | 0 % | 33.33 % | 33.33 % | 33.33 % | 10803603 |
33 | NC_001869 | GTTGAC | 2 | 12 | 58911 | 58922 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 10803606 |
34 | NC_001869 | GAAGTC | 2 | 12 | 59349 | 59360 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 10803606 |
35 | NC_001869 | GCGTCG | 2 | 12 | 60877 | 60888 | 0 % | 16.67 % | 50 % | 33.33 % | 10803607 |
36 | NC_001869 | GAACTC | 2 | 12 | 63843 | 63854 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 10803610 |
37 | NC_001869 | GACGTC | 2 | 12 | 65625 | 65636 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10803612 |
38 | NC_001869 | GGCGCG | 2 | 12 | 80469 | 80480 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
39 | NC_001869 | GACAGC | 2 | 12 | 83258 | 83269 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
40 | NC_001869 | GTCGAT | 2 | 12 | 83723 | 83734 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 10803627 |
41 | NC_001869 | CGTAGT | 2 | 12 | 90571 | 90582 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 10803634 |
42 | NC_001869 | CGACAG | 2 | 12 | 92200 | 92211 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
43 | NC_001869 | TCGCAT | 2 | 12 | 92728 | 92739 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 10803637 |
44 | NC_001869 | CCGTGA | 2 | 12 | 92776 | 92787 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10803637 |
45 | NC_001869 | CGAACG | 2 | 12 | 97911 | 97922 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
46 | NC_001869 | GACAGC | 2 | 12 | 102719 | 102730 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
47 | NC_001869 | GATATC | 2 | 12 | 103377 | 103388 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
48 | NC_001869 | TCGAAG | 2 | 12 | 103711 | 103722 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 10803643 |
49 | NC_001869 | GGACGA | 2 | 12 | 104603 | 104614 | 33.33 % | 0 % | 50 % | 16.67 % | 10803643 |
50 | NC_001869 | GACAGC | 2 | 12 | 106848 | 106859 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
51 | NC_001869 | AAGAGA | 2 | 12 | 107214 | 107225 | 66.67 % | 0 % | 33.33 % | 0 % | 10803644 |
52 | NC_001869 | CGAGAA | 2 | 12 | 110634 | 110645 | 50 % | 0 % | 33.33 % | 16.67 % | 10803646 |
53 | NC_001869 | GCGTGA | 2 | 12 | 111876 | 111887 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10803646 |
54 | NC_001869 | CATTCC | 2 | 12 | 113638 | 113649 | 16.67 % | 33.33 % | 0 % | 50 % | 10803648 |
55 | NC_001869 | CCAGAC | 2 | 12 | 125456 | 125467 | 33.33 % | 0 % | 16.67 % | 50 % | 10803657 |
56 | NC_001869 | GTTCAG | 2 | 12 | 128556 | 128567 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 10803660 |
57 | NC_001869 | GGGGGT | 2 | 12 | 131134 | 131145 | 0 % | 16.67 % | 83.33 % | 0 % | Non-Coding |
58 | NC_001869 | GTAGCG | 2 | 12 | 132376 | 132387 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10803666 |
59 | NC_001869 | CGCAGA | 2 | 12 | 136876 | 136887 | 33.33 % | 0 % | 33.33 % | 33.33 % | 10803668 |
60 | NC_001869 | GCTGTC | 2 | 12 | 142622 | 142633 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
61 | NC_001869 | AGTACG | 2 | 12 | 144078 | 144089 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 10803675 |
62 | NC_001869 | CGACGC | 2 | 12 | 144773 | 144784 | 16.67 % | 0 % | 33.33 % | 50 % | 10803675 |
63 | NC_001869 | GACAGC | 2 | 12 | 152154 | 152165 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
64 | NC_001869 | GACGTC | 2 | 12 | 157753 | 157764 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10803691 |
65 | NC_001869 | GAGTTC | 2 | 12 | 159535 | 159546 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 10803693 |
66 | NC_001869 | CGACGC | 2 | 12 | 162501 | 162512 | 16.67 % | 0 % | 33.33 % | 50 % | 10803696 |
67 | NC_001869 | GTAGCG | 2 | 12 | 163520 | 163531 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10803697 |
68 | NC_001869 | TCGACT | 2 | 12 | 164027 | 164038 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 10803697 |
69 | NC_001869 | GTCAAC | 2 | 12 | 164467 | 164478 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 10803697 |
70 | NC_001869 | TCGCGC | 2 | 12 | 166387 | 166398 | 0 % | 16.67 % | 33.33 % | 50 % | 10803699 |
71 | NC_001869 | ACGCGA | 2 | 12 | 166898 | 166909 | 33.33 % | 0 % | 33.33 % | 33.33 % | 10803700 |
72 | NC_001869 | CGATGG | 2 | 12 | 169961 | 169972 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10803704 |
73 | NC_001869 | AACCCG | 2 | 12 | 170521 | 170532 | 33.33 % | 0 % | 16.67 % | 50 % | 10803704 |
74 | NC_001869 | GCGCAG | 2 | 12 | 170962 | 170973 | 16.67 % | 0 % | 50 % | 33.33 % | 10803705 |
75 | NC_001869 | CGCCCG | 2 | 12 | 171301 | 171312 | 0 % | 0 % | 33.33 % | 66.67 % | 10803705 |
76 | NC_001869 | GGCGTG | 2 | 12 | 172814 | 172825 | 0 % | 16.67 % | 66.67 % | 16.67 % | 10803707 |
77 | NC_001869 | TGGCTG | 2 | 12 | 175390 | 175401 | 0 % | 33.33 % | 50 % | 16.67 % | 10803710 |
78 | NC_001869 | CCCGAA | 2 | 12 | 175749 | 175760 | 33.33 % | 0 % | 16.67 % | 50 % | 10803710 |
79 | NC_001869 | TGCCGA | 2 | 12 | 175960 | 175971 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10803710 |
80 | NC_001869 | AGTGGA | 2 | 12 | 176283 | 176294 | 33.33 % | 16.67 % | 50 % | 0 % | 10803712 |
81 | NC_001869 | CTTCGA | 2 | 12 | 177132 | 177143 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 10803713 |
82 | NC_001869 | GGCCGA | 2 | 12 | 178547 | 178558 | 16.67 % | 0 % | 50 % | 33.33 % | 10803715 |
83 | NC_001869 | CCGACG | 2 | 12 | 180678 | 180689 | 16.67 % | 0 % | 33.33 % | 50 % | 10803717 |
84 | NC_001869 | AGCCGT | 2 | 12 | 186081 | 186092 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10803720 |
85 | NC_001869 | CGCTCA | 2 | 12 | 187479 | 187490 | 16.67 % | 16.67 % | 16.67 % | 50 % | Non-Coding |
86 | NC_001869 | TGAAAT | 2 | 12 | 189736 | 189747 | 50 % | 33.33 % | 16.67 % | 0 % | 10803723 |
87 | NC_001869 | GCTGTC | 2 | 12 | 190057 | 190068 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |