MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Methanocaldococcus jannaschii DSM 2661 plasmid small ECE

Total Repeats: 49

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_001733	TAT	2	6	112	117	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_001733	AAT	2	6	134	139	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_001733	ATT	2	6	159	164	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_001733	TTC	2	6	236	241	0 %	66.67 %	0 %	33.33 %	Non-Coding
5	NC_001733	TTC	2	6	269	274	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_001733	TTC	2	6	371	376	0 %	66.67 %	0 %	33.33 %	Non-Coding
7	NC_001733	ATT	2	6	4835	4840	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_001733	ATC	2	6	5287	5292	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9	NC_001733	TAT	2	6	5307	5312	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_001733	TTC	2	6	5345	5350	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_001733	TCA	2	6	5909	5914	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_001733	TTA	2	6	5915	5920	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_001733	TAT	2	6	5973	5978	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_001733	AAT	2	6	6077	6082	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_001733	ATA	2	6	6085	6090	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_001733	TTA	2	6	6272	6277	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_001733	AAT	2	6	6864	6869	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_001733	AAT	2	6	6886	6891	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_001733	ACC	2	6	6950	6955	33.33 %	0 %	0 %	66.67 %	Non-Coding
20	NC_001733	TTA	2	6	12670	12675	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_001733	AAT	2	6	12687	12692	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_001733	AAT	2	6	12961	12966	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_001733	ATA	2	6	13003	13008	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_001733	AAC	2	6	13148	13153	66.67 %	0 %	0 %	33.33 %	Non-Coding
25	NC_001733	GTA	2	6	14057	14062	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_001733	TAT	2	6	14066	14071	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_001733	TAG	2	6	14129	14134	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_001733	TAA	2	6	14293	14298	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_001733	AGT	2	6	14382	14387	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
30	NC_001733	ATT	2	6	14396	14401	33.33 %	66.67 %	0 %	0 %	Non-Coding
31	NC_001733	TAT	2	6	15070	15075	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_001733	TAT	2	6	15099	15104	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_001733	TAA	2	6	15116	15121	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_001733	TTG	2	6	15175	15180	0 %	66.67 %	33.33 %	0 %	Non-Coding
35	NC_001733	ATT	2	6	15544	15549	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_001733	TAA	2	6	15638	15643	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_001733	TAA	2	6	15678	15683	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_001733	TAT	2	6	15744	15749	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_001733	GCA	2	6	15877	15882	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40	NC_001733	GCA	2	6	16031	16036	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NC_001733	TAA	2	6	16127	16132	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_001733	AAC	3	9	16177	16185	66.67 %	0 %	0 %	33.33 %	Non-Coding
43	NC_001733	TGT	2	6	16193	16198	0 %	66.67 %	33.33 %	0 %	Non-Coding
44	NC_001733	ACT	2	6	16249	16254	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
45	NC_001733	ATA	2	6	16282	16287	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_001733	TAT	2	6	16311	16316	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_001733	ATA	2	6	16371	16376	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_001733	ATT	2	6	16440	16445	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_001733	CAA	2	6	16454	16459	66.67 %	0 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.