MICAS: Microsatellite Analysis Server 3.0

Tetra-nucleotide Non-Coding Repeats of Methanocaldococcus jannaschii DSM 2661 plasmid large ECE

Total Repeats: 50

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_001732	TAAT	2	8	139	146	50 %	50 %	0 %	0 %	Non-Coding
2	NC_001732	AAAT	2	8	4248	4255	75 %	25 %	0 %	0 %	Non-Coding
3	NC_001732	ATTT	2	8	4277	4284	25 %	75 %	0 %	0 %	Non-Coding
4	NC_001732	ACTA	2	8	4439	4446	50 %	25 %	0 %	25 %	Non-Coding
5	NC_001732	GTAT	2	8	7419	7426	25 %	50 %	25 %	0 %	Non-Coding
6	NC_001732	TAAA	2	8	10125	10132	75 %	25 %	0 %	0 %	Non-Coding
7	NC_001732	GTAT	2	8	10646	10653	25 %	50 %	25 %	0 %	Non-Coding
8	NC_001732	AAAG	2	8	12537	12544	75 %	0 %	25 %	0 %	Non-Coding
9	NC_001732	ATTT	2	8	14395	14402	25 %	75 %	0 %	0 %	Non-Coding
10	NC_001732	CCTC	2	8	16823	16830	0 %	25 %	0 %	75 %	Non-Coding
11	NC_001732	CATA	2	8	16943	16950	50 %	25 %	0 %	25 %	Non-Coding
12	NC_001732	GATT	2	8	17129	17136	25 %	50 %	25 %	0 %	Non-Coding
13	NC_001732	GGTA	2	8	17636	17643	25 %	25 %	50 %	0 %	Non-Coding
14	NC_001732	ACGA	2	8	18363	18370	50 %	0 %	25 %	25 %	Non-Coding
15	NC_001732	AACA	2	8	18549	18556	75 %	0 %	0 %	25 %	Non-Coding
16	NC_001732	ATTA	2	8	18798	18805	50 %	50 %	0 %	0 %	Non-Coding
17	NC_001732	CATA	2	8	19267	19274	50 %	25 %	0 %	25 %	Non-Coding
18	NC_001732	GATT	2	8	19453	19460	25 %	50 %	25 %	0 %	Non-Coding
19	NC_001732	TAAA	2	8	19906	19913	75 %	25 %	0 %	0 %	Non-Coding
20	NC_001732	ATTA	2	8	20329	20336	50 %	50 %	0 %	0 %	Non-Coding
21	NC_001732	ACTA	2	8	20382	20389	50 %	25 %	0 %	25 %	Non-Coding
22	NC_001732	GATA	2	8	22402	22409	50 %	25 %	25 %	0 %	Non-Coding
23	NC_001732	AATT	2	8	25119	25126	50 %	50 %	0 %	0 %	Non-Coding
24	NC_001732	TATT	2	8	27626	27633	25 %	75 %	0 %	0 %	Non-Coding
25	NC_001732	TTAA	2	8	30221	30228	50 %	50 %	0 %	0 %	Non-Coding
26	NC_001732	ATAA	2	8	30556	30563	75 %	25 %	0 %	0 %	Non-Coding
27	NC_001732	AACA	2	8	31150	31157	75 %	0 %	0 %	25 %	Non-Coding
28	NC_001732	CAAC	2	8	31276	31283	50 %	0 %	0 %	50 %	Non-Coding
29	NC_001732	ATTC	2	8	31364	31371	25 %	50 %	0 %	25 %	Non-Coding
30	NC_001732	TTTG	2	8	31394	31401	0 %	75 %	25 %	0 %	Non-Coding
31	NC_001732	TCAC	2	8	35353	35360	25 %	25 %	0 %	50 %	Non-Coding
32	NC_001732	TAGT	2	8	35653	35660	25 %	50 %	25 %	0 %	Non-Coding
33	NC_001732	TTAG	2	8	36957	36964	25 %	50 %	25 %	0 %	Non-Coding
34	NC_001732	TTAT	2	8	36987	36994	25 %	75 %	0 %	0 %	Non-Coding
35	NC_001732	CCCT	2	8	38151	38158	0 %	25 %	0 %	75 %	Non-Coding
36	NC_001732	TGTT	2	8	38291	38298	0 %	75 %	25 %	0 %	Non-Coding
37	NC_001732	TTAT	2	8	38496	38503	25 %	75 %	0 %	0 %	Non-Coding
38	NC_001732	GTTT	2	8	38705	38712	0 %	75 %	25 %	0 %	Non-Coding
39	NC_001732	TTAT	2	8	41410	41417	25 %	75 %	0 %	0 %	Non-Coding
40	NC_001732	TTTC	2	8	41452	41459	0 %	75 %	0 %	25 %	Non-Coding
41	NC_001732	TGTA	2	8	41744	41751	25 %	50 %	25 %	0 %	Non-Coding
42	NC_001732	TATT	3	12	41861	41872	25 %	75 %	0 %	0 %	Non-Coding
43	NC_001732	ACCA	2	8	42192	42199	50 %	0 %	0 %	50 %	Non-Coding
44	NC_001732	CAAA	2	8	45189	45196	75 %	0 %	0 %	25 %	Non-Coding
45	NC_001732	ACAA	2	8	45222	45229	75 %	0 %	0 %	25 %	Non-Coding
46	NC_001732	GAGG	2	8	45343	45350	25 %	0 %	75 %	0 %	Non-Coding
47	NC_001732	AGAA	2	8	45361	45368	75 %	0 %	25 %	0 %	Non-Coding
48	NC_001732	ATTT	2	8	47084	47091	25 %	75 %	0 %	0 %	Non-Coding
49	NC_001732	TAAA	2	8	48288	48295	75 %	25 %	0 %	0 %	Non-Coding
50	NC_001732	ATTT	2	8	54260	54267	25 %	75 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.