Hexa-nucleotide Non-Coding Repeats of Rickettsia prowazekii str. Madrid E chromosome
Total Repeats: 136
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_000963 | ATCTAA | 2 | 12 | 19395 | 19406 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
2 | NC_000963 | TACTAG | 2 | 12 | 29570 | 29581 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
3 | NC_000963 | CTACGT | 2 | 12 | 29759 | 29770 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
4 | NC_000963 | AGAAAC | 2 | 12 | 29811 | 29822 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
5 | NC_000963 | AATAAG | 2 | 12 | 32577 | 32588 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
6 | NC_000963 | TTTAAT | 2 | 12 | 37511 | 37522 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
7 | NC_000963 | CTTTGT | 2 | 12 | 44585 | 44596 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
8 | NC_000963 | ATAAAA | 2 | 12 | 52899 | 52910 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
9 | NC_000963 | AATATT | 2 | 12 | 142638 | 142649 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
10 | NC_000963 | ATAATT | 2 | 12 | 153035 | 153046 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
11 | NC_000963 | TAGAGA | 2 | 12 | 153573 | 153584 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
12 | NC_000963 | TATGTA | 2 | 12 | 172996 | 173007 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
13 | NC_000963 | TAAAAT | 2 | 12 | 184464 | 184475 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
14 | NC_000963 | TTTAAT | 2 | 12 | 191792 | 191803 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
15 | NC_000963 | TTAATA | 2 | 12 | 196754 | 196765 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
16 | NC_000963 | TCTTAA | 2 | 12 | 203550 | 203561 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
17 | NC_000963 | AATTCA | 2 | 12 | 209654 | 209665 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
18 | NC_000963 | ACTATA | 2 | 12 | 209836 | 209847 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
19 | NC_000963 | TAATTG | 2 | 12 | 224722 | 224733 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
20 | NC_000963 | AATCTT | 2 | 12 | 226459 | 226470 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
21 | NC_000963 | TTTCTT | 2 | 12 | 233328 | 233339 | 0 % | 83.33 % | 0 % | 16.67 % | Non-Coding |
22 | NC_000963 | GCAATT | 2 | 12 | 234662 | 234673 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
23 | NC_000963 | TAAAAA | 2 | 12 | 237608 | 237619 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
24 | NC_000963 | GTAAAG | 2 | 12 | 238807 | 238818 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
25 | NC_000963 | AAATAA | 2 | 12 | 247651 | 247662 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
26 | NC_000963 | CAATTA | 2 | 12 | 249986 | 249997 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
27 | NC_000963 | AGTAAA | 2 | 12 | 254451 | 254462 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
28 | NC_000963 | TAAAAT | 2 | 12 | 257634 | 257645 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
29 | NC_000963 | CAACTG | 2 | 12 | 262465 | 262476 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
30 | NC_000963 | GATTTT | 2 | 12 | 264422 | 264433 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
31 | NC_000963 | TCAGGA | 2 | 12 | 267740 | 267751 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
32 | NC_000963 | TTGCAA | 2 | 12 | 270477 | 270488 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
33 | NC_000963 | AAAATA | 2 | 12 | 271500 | 271511 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
34 | NC_000963 | TTACTA | 2 | 12 | 277756 | 277767 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
35 | NC_000963 | TTATAA | 2 | 12 | 303445 | 303456 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
36 | NC_000963 | AAGGAT | 2 | 12 | 311028 | 311039 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
37 | NC_000963 | ATAATT | 2 | 12 | 313560 | 313571 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
38 | NC_000963 | TAAAAT | 2 | 12 | 323457 | 323468 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
39 | NC_000963 | TTTATT | 2 | 12 | 330371 | 330382 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
40 | NC_000963 | ATTTTT | 2 | 12 | 334262 | 334273 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
41 | NC_000963 | GCATTA | 2 | 12 | 336105 | 336116 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
42 | NC_000963 | GTAAAA | 2 | 12 | 339131 | 339142 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
43 | NC_000963 | ATATTT | 2 | 12 | 341432 | 341443 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
44 | NC_000963 | CACTTT | 2 | 12 | 342711 | 342722 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
45 | NC_000963 | TCAATA | 2 | 12 | 351308 | 351319 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
46 | NC_000963 | TAAAAT | 2 | 12 | 353382 | 353393 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
47 | NC_000963 | TCAGTA | 2 | 12 | 361820 | 361831 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
48 | NC_000963 | TTAACT | 2 | 12 | 362361 | 362372 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
49 | NC_000963 | TATCTA | 2 | 12 | 368157 | 368168 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
50 | NC_000963 | TATTAG | 2 | 12 | 370018 | 370029 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
51 | NC_000963 | AATTTT | 2 | 12 | 375433 | 375444 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
52 | NC_000963 | CATTAT | 2 | 12 | 422824 | 422835 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
53 | NC_000963 | AGAAAA | 2 | 12 | 425063 | 425074 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
54 | NC_000963 | ATATCT | 2 | 12 | 437276 | 437287 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
55 | NC_000963 | TTAATT | 2 | 12 | 445896 | 445907 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
56 | NC_000963 | ATTTTA | 2 | 12 | 446504 | 446515 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
57 | NC_000963 | TTAGTA | 3 | 18 | 450063 | 450080 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
58 | NC_000963 | TTTTTA | 2 | 12 | 451421 | 451432 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
59 | NC_000963 | TCTATT | 2 | 12 | 482502 | 482513 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
60 | NC_000963 | ATTTAG | 2 | 12 | 483789 | 483800 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
61 | NC_000963 | TAAATA | 2 | 12 | 484581 | 484592 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
62 | NC_000963 | TATTTT | 2 | 12 | 504397 | 504408 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
63 | NC_000963 | ATTTTT | 2 | 12 | 507845 | 507856 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
64 | NC_000963 | AAATTT | 2 | 12 | 532449 | 532460 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
65 | NC_000963 | TTTATA | 2 | 12 | 544556 | 544567 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
66 | NC_000963 | GCAAAA | 2 | 12 | 554497 | 554508 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
67 | NC_000963 | CATTAA | 2 | 12 | 554936 | 554947 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
68 | NC_000963 | AATAAA | 2 | 12 | 569864 | 569875 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
69 | NC_000963 | AAAGCA | 2 | 12 | 580220 | 580231 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
70 | NC_000963 | TCTATT | 2 | 12 | 604179 | 604190 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
71 | NC_000963 | ATTTTG | 2 | 12 | 609102 | 609113 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
72 | NC_000963 | CATAAT | 2 | 12 | 613962 | 613973 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
73 | NC_000963 | ATTAAA | 2 | 12 | 620442 | 620453 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
74 | NC_000963 | TTTAAA | 2 | 12 | 629586 | 629597 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
75 | NC_000963 | GAAATA | 2 | 12 | 642108 | 642119 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
76 | NC_000963 | AAAATA | 2 | 12 | 668562 | 668573 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
77 | NC_000963 | TGGTAT | 2 | 12 | 668954 | 668965 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
78 | NC_000963 | TCAATT | 2 | 12 | 680580 | 680591 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
79 | NC_000963 | TTTTAA | 2 | 12 | 688967 | 688978 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
80 | NC_000963 | TCAGAT | 2 | 12 | 691143 | 691154 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
81 | NC_000963 | TAAAAC | 2 | 12 | 691553 | 691564 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
82 | NC_000963 | GGAGTA | 2 | 12 | 701891 | 701902 | 33.33 % | 16.67 % | 50 % | 0 % | Non-Coding |
83 | NC_000963 | ACATCA | 2 | 12 | 708492 | 708503 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
84 | NC_000963 | ATTACA | 2 | 12 | 715244 | 715255 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
85 | NC_000963 | ATTAAT | 2 | 12 | 715773 | 715784 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
86 | NC_000963 | TGATTT | 2 | 12 | 721772 | 721783 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
87 | NC_000963 | TAATAT | 2 | 12 | 721907 | 721918 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
88 | NC_000963 | GCTTTA | 2 | 12 | 722435 | 722446 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
89 | NC_000963 | TAATTT | 2 | 12 | 726140 | 726151 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
90 | NC_000963 | TATTTT | 2 | 12 | 737211 | 737222 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
91 | NC_000963 | TATTAA | 2 | 12 | 741305 | 741316 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
92 | NC_000963 | TTAATA | 2 | 12 | 743609 | 743620 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
93 | NC_000963 | TGATAT | 2 | 12 | 743631 | 743642 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
94 | NC_000963 | CAAAAA | 2 | 12 | 744286 | 744297 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
95 | NC_000963 | GATATT | 2 | 12 | 746735 | 746746 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
96 | NC_000963 | GTAATT | 2 | 12 | 747807 | 747818 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
97 | NC_000963 | TTATTT | 2 | 12 | 763502 | 763513 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
98 | NC_000963 | AATAAG | 2 | 12 | 772677 | 772688 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
99 | NC_000963 | GAAAAA | 2 | 12 | 778573 | 778584 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
100 | NC_000963 | TTCAAT | 2 | 12 | 794051 | 794062 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
101 | NC_000963 | TTTTAA | 2 | 12 | 795716 | 795727 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
102 | NC_000963 | AAAATA | 2 | 12 | 797520 | 797531 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
103 | NC_000963 | AAAAAT | 2 | 12 | 800114 | 800125 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
104 | NC_000963 | GTTTAT | 2 | 12 | 800786 | 800797 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
105 | NC_000963 | TAATCT | 2 | 12 | 823092 | 823103 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
106 | NC_000963 | GTACTT | 2 | 12 | 831679 | 831690 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
107 | NC_000963 | GTGTAT | 2 | 12 | 831704 | 831715 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
108 | NC_000963 | ATATTT | 2 | 12 | 832829 | 832840 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
109 | NC_000963 | TTTTTA | 2 | 12 | 839661 | 839672 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
110 | NC_000963 | TACAAG | 2 | 12 | 843311 | 843322 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
111 | NC_000963 | ACTGAC | 2 | 12 | 864603 | 864614 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
112 | NC_000963 | CACAAA | 2 | 12 | 869949 | 869960 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
113 | NC_000963 | ATTTTG | 2 | 12 | 886584 | 886595 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
114 | NC_000963 | TAATGA | 2 | 12 | 896165 | 896176 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
115 | NC_000963 | TCTTTT | 2 | 12 | 921176 | 921187 | 0 % | 83.33 % | 0 % | 16.67 % | Non-Coding |
116 | NC_000963 | AATAGC | 2 | 12 | 933433 | 933444 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
117 | NC_000963 | TATGTT | 2 | 12 | 934796 | 934807 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
118 | NC_000963 | TTTAGT | 2 | 12 | 970210 | 970221 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
119 | NC_000963 | AAGCTG | 2 | 12 | 976677 | 976688 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
120 | NC_000963 | TAAATA | 2 | 12 | 982776 | 982787 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
121 | NC_000963 | ATCTGT | 2 | 12 | 999350 | 999361 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
122 | NC_000963 | ATTATC | 2 | 12 | 1015140 | 1015151 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
123 | NC_000963 | TTACTG | 2 | 12 | 1034758 | 1034769 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
124 | NC_000963 | AAATTT | 2 | 12 | 1035047 | 1035058 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
125 | NC_000963 | TATTGT | 2 | 12 | 1035239 | 1035250 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
126 | NC_000963 | TTCACT | 2 | 12 | 1048658 | 1048669 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
127 | NC_000963 | AAAAAT | 2 | 12 | 1062396 | 1062407 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
128 | NC_000963 | TAACAA | 2 | 12 | 1064063 | 1064074 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
129 | NC_000963 | TTAAAG | 2 | 12 | 1081963 | 1081974 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
130 | NC_000963 | AAGTAA | 2 | 12 | 1093592 | 1093603 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
131 | NC_000963 | ATATTA | 2 | 12 | 1094422 | 1094433 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
132 | NC_000963 | ATATAA | 2 | 12 | 1099836 | 1099847 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
133 | NC_000963 | TTATTT | 2 | 12 | 1100201 | 1100212 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
134 | NC_000963 | AACGTT | 2 | 12 | 1105547 | 1105558 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
135 | NC_000963 | TTCTTA | 2 | 12 | 1105845 | 1105856 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
136 | NC_000963 | TATAAA | 2 | 12 | 1108474 | 1108485 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |