Hexa-nucleotide Repeats of Deinococcus radiodurans R1 plasmid MP1
Total Repeats: 103
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_000958 | AGGACA | 2 | 12 | 4394 | 4405 | 50 % | 0 % | 33.33 % | 16.67 % | 10957490 |
2 | NC_000958 | CAGGCA | 2 | 12 | 5467 | 5478 | 33.33 % | 0 % | 33.33 % | 33.33 % | 10957491 |
3 | NC_000958 | GTGTTC | 2 | 12 | 7029 | 7040 | 0 % | 50 % | 33.33 % | 16.67 % | 10957474 |
4 | NC_000958 | TCACTG | 2 | 12 | 8150 | 8161 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 10957436 |
5 | NC_000958 | ACCTGC | 2 | 12 | 10820 | 10831 | 16.67 % | 16.67 % | 16.67 % | 50 % | 10957438 |
6 | NC_000958 | GCGGGT | 2 | 12 | 12699 | 12710 | 0 % | 16.67 % | 66.67 % | 16.67 % | 10957440 |
7 | NC_000958 | TGGCGG | 2 | 12 | 16644 | 16655 | 0 % | 16.67 % | 66.67 % | 16.67 % | 10957443 |
8 | NC_000958 | GTGGCA | 2 | 12 | 17183 | 17194 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957443 |
9 | NC_000958 | GCTGGA | 2 | 12 | 18457 | 18468 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957475 |
10 | NC_000958 | ACCCTG | 2 | 12 | 18728 | 18739 | 16.67 % | 16.67 % | 16.67 % | 50 % | 10957475 |
11 | NC_000958 | CGAACA | 2 | 12 | 22113 | 22124 | 50 % | 0 % | 16.67 % | 33.33 % | 10957465 |
12 | NC_000958 | GCGGAG | 2 | 12 | 26491 | 26502 | 16.67 % | 0 % | 66.67 % | 16.67 % | 10957446 |
13 | NC_000958 | GGCTCG | 3 | 18 | 26813 | 26830 | 0 % | 16.67 % | 50 % | 33.33 % | 10957447 |
14 | NC_000958 | TGGGCA | 2 | 12 | 26876 | 26887 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957447 |
15 | NC_000958 | CAGGCA | 2 | 12 | 27740 | 27751 | 33.33 % | 0 % | 33.33 % | 33.33 % | 10957448 |
16 | NC_000958 | GACGTG | 2 | 12 | 28914 | 28925 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957449 |
17 | NC_000958 | TGACGC | 2 | 12 | 31985 | 31996 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10957466 |
18 | NC_000958 | GTAGGC | 2 | 12 | 33600 | 33611 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957526 |
19 | NC_000958 | TTCCTG | 2 | 12 | 35333 | 35344 | 0 % | 50 % | 16.67 % | 33.33 % | 10957452 |
20 | NC_000958 | TCGATA | 2 | 12 | 36792 | 36803 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 10957453 |
21 | NC_000958 | CGTCAA | 2 | 12 | 39834 | 39845 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 10957495 |
22 | NC_000958 | CGGCAC | 2 | 12 | 40314 | 40325 | 16.67 % | 0 % | 33.33 % | 50 % | 10957495 |
23 | NC_000958 | CCAACC | 2 | 12 | 40508 | 40519 | 33.33 % | 0 % | 0 % | 66.67 % | 10957495 |
24 | NC_000958 | GCAGCC | 2 | 12 | 42190 | 42201 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
25 | NC_000958 | GCGTGC | 2 | 12 | 42624 | 42635 | 0 % | 16.67 % | 50 % | 33.33 % | 10957497 |
26 | NC_000958 | TGCGGG | 2 | 12 | 43440 | 43451 | 0 % | 16.67 % | 66.67 % | 16.67 % | 10957497 |
27 | NC_000958 | GTGGCG | 2 | 12 | 43910 | 43921 | 0 % | 16.67 % | 66.67 % | 16.67 % | 10957497 |
28 | NC_000958 | GTGCGG | 2 | 12 | 45378 | 45389 | 0 % | 16.67 % | 66.67 % | 16.67 % | 10957498 |
29 | NC_000958 | AGGCCG | 2 | 12 | 46456 | 46467 | 16.67 % | 0 % | 50 % | 33.33 % | 10957498 |
30 | NC_000958 | GGGCGC | 2 | 12 | 47569 | 47580 | 0 % | 0 % | 66.67 % | 33.33 % | 10957498 |
31 | NC_000958 | GCTGGC | 2 | 12 | 51377 | 51388 | 0 % | 16.67 % | 50 % | 33.33 % | 10957456 |
32 | NC_000958 | GAGCTG | 2 | 12 | 51804 | 51815 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957456 |
33 | NC_000958 | GCTTCC | 2 | 12 | 53323 | 53334 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
34 | NC_000958 | GCCTTC | 2 | 12 | 59556 | 59567 | 0 % | 33.33 % | 16.67 % | 50 % | 10957501 |
35 | NC_000958 | AGCCCG | 2 | 12 | 63178 | 63189 | 16.67 % | 0 % | 33.33 % | 50 % | 10957502 |
36 | NC_000958 | GTGTTC | 2 | 12 | 65825 | 65836 | 0 % | 50 % | 33.33 % | 16.67 % | 10957469 |
37 | NC_000958 | GCCGGC | 2 | 12 | 69741 | 69752 | 0 % | 0 % | 50 % | 50 % | 10957504 |
38 | NC_000958 | CTCAAG | 2 | 12 | 70083 | 70094 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
39 | NC_000958 | TGTCGG | 2 | 12 | 70934 | 70945 | 0 % | 33.33 % | 50 % | 16.67 % | 10957506 |
40 | NC_000958 | AGGTGC | 2 | 12 | 71003 | 71014 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957506 |
41 | NC_000958 | GCGTGC | 2 | 12 | 71108 | 71119 | 0 % | 16.67 % | 50 % | 33.33 % | 10957506 |
42 | NC_000958 | TGCCAC | 2 | 12 | 74110 | 74121 | 16.67 % | 16.67 % | 16.67 % | 50 % | 10957508 |
43 | NC_000958 | AACGGT | 2 | 12 | 76013 | 76024 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 10957508 |
44 | NC_000958 | CCGCTG | 2 | 12 | 76077 | 76088 | 0 % | 16.67 % | 33.33 % | 50 % | 10957508 |
45 | NC_000958 | GGCGTC | 2 | 12 | 76275 | 76286 | 0 % | 16.67 % | 50 % | 33.33 % | 10957508 |
46 | NC_000958 | CTCAGC | 2 | 12 | 78915 | 78926 | 16.67 % | 16.67 % | 16.67 % | 50 % | 10957459 |
47 | NC_000958 | CGCCAG | 2 | 12 | 79976 | 79987 | 16.67 % | 0 % | 33.33 % | 50 % | 10957459 |
48 | NC_000958 | CCACTC | 2 | 12 | 81148 | 81159 | 16.67 % | 16.67 % | 0 % | 66.67 % | 10957459 |
49 | NC_000958 | TGACGG | 2 | 12 | 81199 | 81210 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957459 |
50 | NC_000958 | CGGTGA | 2 | 12 | 81397 | 81408 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957459 |
51 | NC_000958 | CAGGTG | 2 | 12 | 81415 | 81426 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957459 |
52 | NC_000958 | GGCCAG | 2 | 12 | 88169 | 88180 | 16.67 % | 0 % | 50 % | 33.33 % | 10957514 |
53 | NC_000958 | TCAGCA | 2 | 12 | 89822 | 89833 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 10957462 |
54 | NC_000958 | CAGCCC | 2 | 12 | 93190 | 93201 | 16.67 % | 0 % | 16.67 % | 66.67 % | Non-Coding |
55 | NC_000958 | GGCCGT | 2 | 12 | 93489 | 93500 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
56 | NC_000958 | CGCGCT | 2 | 12 | 95169 | 95180 | 0 % | 16.67 % | 33.33 % | 50 % | 10957464 |
57 | NC_000958 | GCCGGG | 2 | 12 | 97501 | 97512 | 0 % | 0 % | 66.67 % | 33.33 % | 10957399 |
58 | NC_000958 | GCTGAC | 2 | 12 | 99681 | 99692 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 10957401 |
59 | NC_000958 | CGCTGC | 2 | 12 | 100329 | 100340 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
60 | NC_000958 | TTCATG | 2 | 12 | 100799 | 100810 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
61 | NC_000958 | CGCGGG | 2 | 12 | 101385 | 101396 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
62 | NC_000958 | GACGTG | 2 | 12 | 102783 | 102794 | 16.67 % | 16.67 % | 50 % | 16.67 % | 10957402 |
63 | NC_000958 | CACCAT | 2 | 12 | 102815 | 102826 | 33.33 % | 16.67 % | 0 % | 50 % | 10957402 |
64 | NC_000958 | AGCAGG | 2 | 12 | 103387 | 103398 | 33.33 % | 0 % | 50 % | 16.67 % | 10957402 |
65 | NC_000958 | ACCAAC | 2 | 12 | 104850 | 104861 | 50 % | 0 % | 0 % | 50 % | 10957403 |
66 | NC_000958 | ACGCCA | 2 | 12 | 105121 | 105132 | 33.33 % | 0 % | 16.67 % | 50 % | 10957403 |
67 | NC_000958 | GTGCCG | 2 | 12 | 106792 | 106803 | 0 % | 16.67 % | 50 % | 33.33 % | 10957404 |
68 | NC_000958 | CAGCCG | 2 | 12 | 108023 | 108034 | 16.67 % | 0 % | 33.33 % | 50 % | 10957405 |
69 | NC_000958 | CAGGCG | 2 | 12 | 108427 | 108438 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
70 | NC_000958 | GGCGCC | 2 | 12 | 112315 | 112326 | 0 % | 0 % | 50 % | 50 % | 10957408 |
71 | NC_000958 | AACACC | 2 | 12 | 112402 | 112413 | 50 % | 0 % | 0 % | 50 % | 10957408 |
72 | NC_000958 | ACCGGC | 2 | 12 | 113164 | 113175 | 16.67 % | 0 % | 33.33 % | 50 % | 10957409 |
73 | NC_000958 | CCCGCC | 2 | 12 | 118560 | 118571 | 0 % | 0 % | 16.67 % | 83.33 % | 10957484 |
74 | NC_000958 | CACCGG | 2 | 12 | 119217 | 119228 | 16.67 % | 0 % | 33.33 % | 50 % | 10957515 |
75 | NC_000958 | CGTAAT | 2 | 12 | 121402 | 121413 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
76 | NC_000958 | CGAACA | 2 | 12 | 122293 | 122304 | 50 % | 0 % | 16.67 % | 33.33 % | 10957470 |
77 | NC_000958 | CATGCC | 2 | 12 | 125859 | 125870 | 16.67 % | 16.67 % | 16.67 % | 50 % | 10957516 |
78 | NC_000958 | CGCCAG | 2 | 12 | 128666 | 128677 | 16.67 % | 0 % | 33.33 % | 50 % | 10957414 |
79 | NC_000958 | GGGCAG | 2 | 12 | 129587 | 129598 | 16.67 % | 0 % | 66.67 % | 16.67 % | 10957415 |
80 | NC_000958 | CTTCAA | 2 | 12 | 129832 | 129843 | 33.33 % | 33.33 % | 0 % | 33.33 % | 10957415 |
81 | NC_000958 | CCCTTT | 2 | 12 | 130406 | 130417 | 0 % | 50 % | 0 % | 50 % | 10957416 |
82 | NC_000958 | TGACGA | 2 | 12 | 136559 | 136570 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 10957486 |
83 | NC_000958 | GTGTTC | 2 | 12 | 138160 | 138171 | 0 % | 50 % | 33.33 % | 16.67 % | 10957472 |
84 | NC_000958 | CGTGGT | 2 | 12 | 141794 | 141805 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
85 | NC_000958 | GCCCGC | 2 | 12 | 143934 | 143945 | 0 % | 0 % | 33.33 % | 66.67 % | 10957421 |
86 | NC_000958 | CACCGA | 2 | 12 | 144500 | 144511 | 33.33 % | 0 % | 16.67 % | 50 % | 10957422 |
87 | NC_000958 | CGACCA | 2 | 12 | 146504 | 146515 | 33.33 % | 0 % | 16.67 % | 50 % | 10957424 |
88 | NC_000958 | CGAGGG | 2 | 12 | 147089 | 147100 | 16.67 % | 0 % | 66.67 % | 16.67 % | 10957424 |
89 | NC_000958 | CGCCAG | 2 | 12 | 150726 | 150737 | 16.67 % | 0 % | 33.33 % | 50 % | 10957427 |
90 | NC_000958 | GCGACC | 2 | 12 | 155265 | 155276 | 16.67 % | 0 % | 33.33 % | 50 % | 10957430 |
91 | NC_000958 | GCGTCG | 2 | 12 | 155352 | 155363 | 0 % | 16.67 % | 50 % | 33.33 % | 10957430 |
92 | NC_000958 | GTGTTC | 2 | 12 | 156491 | 156502 | 0 % | 50 % | 33.33 % | 16.67 % | 10957473 |
93 | NC_000958 | CCCTGA | 2 | 12 | 158563 | 158574 | 16.67 % | 16.67 % | 16.67 % | 50 % | 10957431 |
94 | NC_000958 | TTCGTG | 2 | 12 | 159071 | 159082 | 0 % | 50 % | 33.33 % | 16.67 % | 10957431 |
95 | NC_000958 | ACGGCG | 2 | 12 | 161319 | 161330 | 16.67 % | 0 % | 50 % | 33.33 % | 10957431 |
96 | NC_000958 | GAGGGC | 2 | 12 | 162991 | 163002 | 16.67 % | 0 % | 66.67 % | 16.67 % | 10957432 |
97 | NC_000958 | CCTGCC | 2 | 12 | 165087 | 165098 | 0 % | 16.67 % | 16.67 % | 66.67 % | 10957432 |
98 | NC_000958 | GGCCTG | 2 | 12 | 165150 | 165161 | 0 % | 16.67 % | 50 % | 33.33 % | 10957433 |
99 | NC_000958 | CCCGCG | 2 | 12 | 166018 | 166029 | 0 % | 0 % | 33.33 % | 66.67 % | 10957433 |
100 | NC_000958 | GCGGAA | 2 | 12 | 170549 | 170560 | 33.33 % | 0 % | 50 % | 16.67 % | 10957478 |
101 | NC_000958 | AGCATC | 2 | 12 | 171675 | 171686 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 10957435 |
102 | NC_000958 | CCGGCA | 2 | 12 | 173002 | 173013 | 16.67 % | 0 % | 33.33 % | 50 % | 10957435 |
103 | NC_000958 | CAACGT | 2 | 12 | 175204 | 175215 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 10957488 |