MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Thermotoga maritima MSB8 chromosome

Total Repeats: 36

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_000853	CGTTTC	2	12	1338	1349	0 %	50 %	16.67 %	33.33 %	Non-Coding
2	NC_000853	TTTTGT	2	12	1662	1673	0 %	83.33 %	16.67 %	0 %	Non-Coding
3	NC_000853	ACTCGA	2	12	2375	2386	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
4	NC_000853	GTTTTT	2	12	66637	66648	0 %	83.33 %	16.67 %	0 %	Non-Coding
5	NC_000853	TTTGCA	2	12	130105	130116	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
6	NC_000853	GGCTCG	2	12	190563	190574	0 %	16.67 %	50 %	33.33 %	Non-Coding
7	NC_000853	CGTAGC	2	12	191460	191471	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
8	NC_000853	CAAAAA	2	12	205759	205770	83.33 %	0 %	0 %	16.67 %	Non-Coding
9	NC_000853	AGGGGA	2	12	277353	277364	33.33 %	0 %	66.67 %	0 %	Non-Coding
10	NC_000853	AAAGGA	2	12	283815	283826	66.67 %	0 %	33.33 %	0 %	Non-Coding
11	NC_000853	AAAAGT	2	12	419158	419169	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
12	NC_000853	AATGAA	2	12	435619	435630	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
13	NC_000853	AAAGAA	2	12	510764	510775	83.33 %	0 %	16.67 %	0 %	Non-Coding
14	NC_000853	CTGTTG	2	12	531785	531796	0 %	50 %	33.33 %	16.67 %	Non-Coding
15	NC_000853	GAAAGA	2	12	632896	632907	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_000853	GTGAAA	2	12	637859	637870	50 %	16.67 %	33.33 %	0 %	Non-Coding
17	NC_000853	ATTCAA	2	12	655452	655463	50 %	33.33 %	0 %	16.67 %	Non-Coding
18	NC_000853	TTTTTA	2	12	810075	810086	16.67 %	83.33 %	0 %	0 %	Non-Coding
19	NC_000853	AGAAAG	2	12	877126	877137	66.67 %	0 %	33.33 %	0 %	Non-Coding
20	NC_000853	ACATTT	2	12	895018	895029	33.33 %	50 %	0 %	16.67 %	Non-Coding
21	NC_000853	GAAAAG	2	12	896524	896535	66.67 %	0 %	33.33 %	0 %	Non-Coding
22	NC_000853	AAAAAT	2	12	1034625	1034636	83.33 %	16.67 %	0 %	0 %	Non-Coding
23	NC_000853	CTTGTC	2	12	1043905	1043916	0 %	50 %	16.67 %	33.33 %	Non-Coding
24	NC_000853	GTCGTG	2	12	1103894	1103905	0 %	33.33 %	50 %	16.67 %	Non-Coding
25	NC_000853	TCCTCG	2	12	1112171	1112182	0 %	33.33 %	16.67 %	50 %	Non-Coding
26	NC_000853	CACATC	2	12	1172018	1172029	33.33 %	16.67 %	0 %	50 %	Non-Coding
27	NC_000853	CAGGAA	2	12	1172369	1172380	50 %	0 %	33.33 %	16.67 %	Non-Coding
28	NC_000853	AAGACG	2	12	1183638	1183649	50 %	0 %	33.33 %	16.67 %	Non-Coding
29	NC_000853	TTACAC	2	12	1184947	1184958	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
30	NC_000853	AAATAA	2	12	1310404	1310415	83.33 %	16.67 %	0 %	0 %	Non-Coding
31	NC_000853	CTGTTT	2	12	1312972	1312983	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
32	NC_000853	ACTCAT	2	12	1520011	1520022	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_000853	GCCATC	2	12	1690006	1690017	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
34	NC_000853	GGGATT	2	12	1735728	1735739	16.67 %	33.33 %	50 %	0 %	Non-Coding
35	NC_000853	TCTTCA	2	12	1767092	1767103	16.67 %	50 %	0 %	33.33 %	Non-Coding
36	NC_000853	GCTGGC	3	18	1779983	1780000	0 %	16.67 %	50 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.