MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Yersinia pseudotuberculosis IP 31758 plasmid_59kb

Total Repeats: 104

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009704	CGA	2	6	57	62	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2	NC_009704	AGG	2	6	120	125	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_009704	TTA	2	6	160	165	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_009704	CCT	2	6	255	260	0 %	33.33 %	0 %	66.67 %	Non-Coding
5	NC_009704	CAG	2	6	459	464	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_009704	GTT	2	6	1584	1589	0 %	66.67 %	33.33 %	0 %	Non-Coding
7	NC_009704	TGA	2	6	1704	1709	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_009704	AAC	2	6	1795	1800	66.67 %	0 %	0 %	33.33 %	Non-Coding
9	NC_009704	TCC	2	6	2423	2428	0 %	33.33 %	0 %	66.67 %	Non-Coding
10	NC_009704	ACT	2	6	2458	2463	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_009704	ATA	2	6	2581	2586	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_009704	AAT	2	6	2625	2630	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_009704	CAG	2	6	2927	2932	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
14	NC_009704	ATG	2	6	3006	3011	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
15	NC_009704	CCG	2	6	3028	3033	0 %	0 %	33.33 %	66.67 %	Non-Coding
16	NC_009704	CCG	2	6	3097	3102	0 %	0 %	33.33 %	66.67 %	Non-Coding
17	NC_009704	CTT	2	6	3199	3204	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_009704	GTT	2	6	3301	3306	0 %	66.67 %	33.33 %	0 %	Non-Coding
19	NC_009704	GCT	2	6	3786	3791	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_009704	CAA	2	6	4868	4873	66.67 %	0 %	0 %	33.33 %	Non-Coding
21	NC_009704	CAG	3	9	4976	4984	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
22	NC_009704	ATT	2	6	5041	5046	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_009704	TTC	2	6	5050	5055	0 %	66.67 %	0 %	33.33 %	Non-Coding
24	NC_009704	GCT	2	6	5304	5309	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_009704	GAA	2	6	5547	5552	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_009704	AAC	2	6	14756	14761	66.67 %	0 %	0 %	33.33 %	Non-Coding
27	NC_009704	ACA	2	6	16219	16224	66.67 %	0 %	0 %	33.33 %	Non-Coding
28	NC_009704	CAG	2	6	16232	16237	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
29	NC_009704	AAT	2	6	16241	16246	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_009704	GGT	2	6	25998	26003	0 %	33.33 %	66.67 %	0 %	Non-Coding
31	NC_009704	ATT	2	6	27400	27405	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_009704	AAT	2	6	27474	27479	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_009704	TTA	2	6	30004	30009	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_009704	AAC	2	6	30014	30019	66.67 %	0 %	0 %	33.33 %	Non-Coding
35	NC_009704	TCA	2	6	30340	30345	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_009704	ACA	2	6	30377	30382	66.67 %	0 %	0 %	33.33 %	Non-Coding
37	NC_009704	AAC	2	6	30402	30407	66.67 %	0 %	0 %	33.33 %	Non-Coding
38	NC_009704	TGA	2	6	30462	30467	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_009704	CTT	2	6	30719	30724	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_009704	TCT	2	6	30757	30762	0 %	66.67 %	0 %	33.33 %	Non-Coding
41	NC_009704	GCG	2	6	31221	31226	0 %	0 %	66.67 %	33.33 %	Non-Coding
42	NC_009704	GAA	2	6	31296	31301	66.67 %	0 %	33.33 %	0 %	Non-Coding
43	NC_009704	ATT	2	6	31436	31441	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_009704	CAA	2	6	31463	31468	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_009704	CTT	2	6	31469	31474	0 %	66.67 %	0 %	33.33 %	Non-Coding
46	NC_009704	TCT	2	6	31562	31567	0 %	66.67 %	0 %	33.33 %	Non-Coding
47	NC_009704	CAT	2	6	31615	31620	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
48	NC_009704	TAA	2	6	31744	31749	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_009704	TTA	2	6	31847	31852	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_009704	CAA	2	6	31955	31960	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_009704	GCC	2	6	32108	32113	0 %	0 %	33.33 %	66.67 %	Non-Coding
52	NC_009704	CGG	2	6	32117	32122	0 %	0 %	66.67 %	33.33 %	Non-Coding
53	NC_009704	CTC	2	6	32989	32994	0 %	33.33 %	0 %	66.67 %	Non-Coding
54	NC_009704	TGA	3	9	33075	33083	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_009704	ATG	2	6	33124	33129	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_009704	TGC	2	6	33210	33215	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
57	NC_009704	CAA	2	6	33353	33358	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_009704	AGT	2	6	33371	33376	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
59	NC_009704	GCC	2	6	33994	33999	0 %	0 %	33.33 %	66.67 %	Non-Coding
60	NC_009704	AGA	2	6	34129	34134	66.67 %	0 %	33.33 %	0 %	Non-Coding
61	NC_009704	TTA	2	6	34248	34253	33.33 %	66.67 %	0 %	0 %	Non-Coding
62	NC_009704	ATT	2	6	34814	34819	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_009704	AGC	2	6	34984	34989	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
64	NC_009704	CGC	2	6	35000	35005	0 %	0 %	33.33 %	66.67 %	Non-Coding
65	NC_009704	GAC	2	6	35364	35369	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
66	NC_009704	GGC	2	6	35980	35985	0 %	0 %	66.67 %	33.33 %	Non-Coding
67	NC_009704	TTA	2	6	36008	36013	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_009704	GGC	2	6	38277	38282	0 %	0 %	66.67 %	33.33 %	Non-Coding
69	NC_009704	TCT	2	6	39467	39472	0 %	66.67 %	0 %	33.33 %	Non-Coding
70	NC_009704	ACC	2	6	50647	50652	33.33 %	0 %	0 %	66.67 %	Non-Coding
71	NC_009704	GTA	2	6	52394	52399	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
72	NC_009704	GCG	2	6	52403	52408	0 %	0 %	66.67 %	33.33 %	Non-Coding
73	NC_009704	GCA	2	6	52422	52427	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
74	NC_009704	AGA	2	6	52470	52475	66.67 %	0 %	33.33 %	0 %	Non-Coding
75	NC_009704	GAT	2	6	52477	52482	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
76	NC_009704	CTT	2	6	52513	52518	0 %	66.67 %	0 %	33.33 %	Non-Coding
77	NC_009704	TTC	2	6	52647	52652	0 %	66.67 %	0 %	33.33 %	Non-Coding
78	NC_009704	TTG	2	6	52812	52817	0 %	66.67 %	33.33 %	0 %	Non-Coding
79	NC_009704	TTG	2	6	52830	52835	0 %	66.67 %	33.33 %	0 %	Non-Coding
80	NC_009704	GAT	2	6	52936	52941	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
81	NC_009704	TTG	2	6	52953	52958	0 %	66.67 %	33.33 %	0 %	Non-Coding
82	NC_009704	ATT	2	6	52969	52974	33.33 %	66.67 %	0 %	0 %	Non-Coding
83	NC_009704	CTT	2	6	52979	52984	0 %	66.67 %	0 %	33.33 %	Non-Coding
84	NC_009704	CAT	2	6	52994	52999	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
85	NC_009704	CTT	2	6	53012	53017	0 %	66.67 %	0 %	33.33 %	Non-Coding
86	NC_009704	TCA	2	6	53059	53064	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
87	NC_009704	TAT	2	6	53225	53230	33.33 %	66.67 %	0 %	0 %	Non-Coding
88	NC_009704	TGT	2	6	53336	53341	0 %	66.67 %	33.33 %	0 %	Non-Coding
89	NC_009704	CTG	2	6	53396	53401	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
90	NC_009704	AAG	2	6	53439	53444	66.67 %	0 %	33.33 %	0 %	Non-Coding
91	NC_009704	CTC	2	6	53466	53471	0 %	33.33 %	0 %	66.67 %	Non-Coding
92	NC_009704	AGC	2	6	53515	53520	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
93	NC_009704	ATT	2	6	53630	53635	33.33 %	66.67 %	0 %	0 %	Non-Coding
94	NC_009704	TAT	2	6	53662	53667	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_009704	GAC	2	6	53726	53731	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
96	NC_009704	AGG	2	6	54027	54032	33.33 %	0 %	66.67 %	0 %	Non-Coding
97	NC_009704	ACT	2	6	54091	54096	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
98	NC_009704	AGC	2	6	55026	55031	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
99	NC_009704	CAC	2	6	55034	55039	33.33 %	0 %	0 %	66.67 %	Non-Coding
100	NC_009704	AAG	2	6	55042	55047	66.67 %	0 %	33.33 %	0 %	Non-Coding
101	NC_009704	CCG	2	6	57803	57808	0 %	0 %	33.33 %	66.67 %	Non-Coding
102	NC_009704	CAA	2	6	58285	58290	66.67 %	0 %	0 %	33.33 %	Non-Coding
103	NC_009704	ATG	2	6	58443	58448	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
104	NC_009704	AGG	2	6	58570	58575	33.33 %	0 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.