MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Xanthomonas axonopodis Xac29-1 plasmid pXAC64

Total Repeats: 132

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020797	GCA	2	6	294	299	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2	NC_020797	GGC	2	6	319	324	0 %	0 %	66.67 %	33.33 %	Non-Coding
3	NC_020797	GCG	2	6	331	336	0 %	0 %	66.67 %	33.33 %	Non-Coding
4	NC_020797	CCG	2	6	348	353	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_020797	TCA	2	6	359	364	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6	NC_020797	CAA	2	6	486	491	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_020797	TGT	2	6	696	701	0 %	66.67 %	33.33 %	0 %	Non-Coding
8	NC_020797	CTT	2	6	723	728	0 %	66.67 %	0 %	33.33 %	Non-Coding
9	NC_020797	TTG	2	6	768	773	0 %	66.67 %	33.33 %	0 %	Non-Coding
10	NC_020797	CCA	2	6	1392	1397	33.33 %	0 %	0 %	66.67 %	Non-Coding
11	NC_020797	GGC	2	6	2200	2205	0 %	0 %	66.67 %	33.33 %	Non-Coding
12	NC_020797	ACT	2	6	2225	2230	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_020797	GAA	2	6	2315	2320	66.67 %	0 %	33.33 %	0 %	Non-Coding
14	NC_020797	CGC	2	6	2374	2379	0 %	0 %	33.33 %	66.67 %	Non-Coding
15	NC_020797	AAG	2	6	4048	4053	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_020797	TGT	2	6	4223	4228	0 %	66.67 %	33.33 %	0 %	Non-Coding
17	NC_020797	TGC	2	6	4247	4252	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18	NC_020797	ATT	2	6	4412	4417	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_020797	GTT	2	6	4444	4449	0 %	66.67 %	33.33 %	0 %	Non-Coding
20	NC_020797	GGT	3	9	5790	5798	0 %	33.33 %	66.67 %	0 %	Non-Coding
21	NC_020797	TCC	2	6	5815	5820	0 %	33.33 %	0 %	66.67 %	Non-Coding
22	NC_020797	ATT	2	6	5836	5841	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_020797	CTC	2	6	10187	10192	0 %	33.33 %	0 %	66.67 %	Non-Coding
24	NC_020797	GAG	2	6	10320	10325	33.33 %	0 %	66.67 %	0 %	Non-Coding
25	NC_020797	ATT	2	6	11624	11629	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_020797	CAC	2	6	11637	11642	33.33 %	0 %	0 %	66.67 %	Non-Coding
27	NC_020797	TGG	2	6	11708	11713	0 %	33.33 %	66.67 %	0 %	Non-Coding
28	NC_020797	CAG	2	6	11779	11784	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
29	NC_020797	ATG	2	6	12673	12678	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
30	NC_020797	TGG	2	6	12812	12817	0 %	33.33 %	66.67 %	0 %	Non-Coding
31	NC_020797	GCA	2	6	12825	12830	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_020797	CAG	2	6	12849	12854	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
33	NC_020797	CGT	2	6	12857	12862	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
34	NC_020797	GGC	2	6	13105	13110	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_020797	GGC	2	6	13149	13154	0 %	0 %	66.67 %	33.33 %	Non-Coding
36	NC_020797	GCA	2	6	13180	13185	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
37	NC_020797	CGA	2	6	13419	13424	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
38	NC_020797	CCT	2	6	13559	13564	0 %	33.33 %	0 %	66.67 %	Non-Coding
39	NC_020797	CGG	2	6	13668	13673	0 %	0 %	66.67 %	33.33 %	Non-Coding
40	NC_020797	TCC	2	6	13835	13840	0 %	33.33 %	0 %	66.67 %	Non-Coding
41	NC_020797	GTC	2	6	13882	13887	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
42	NC_020797	CGG	2	6	14103	14108	0 %	0 %	66.67 %	33.33 %	Non-Coding
43	NC_020797	CGG	2	6	14131	14136	0 %	0 %	66.67 %	33.33 %	Non-Coding
44	NC_020797	CGG	2	6	14189	14194	0 %	0 %	66.67 %	33.33 %	Non-Coding
45	NC_020797	GCC	2	6	17783	17788	0 %	0 %	33.33 %	66.67 %	Non-Coding
46	NC_020797	TGC	2	6	17802	17807	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
47	NC_020797	GCT	2	6	17873	17878	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
48	NC_020797	TCA	2	6	19182	19187	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_020797	CTG	2	6	19387	19392	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
50	NC_020797	CAA	2	6	19763	19768	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_020797	GTC	2	6	19808	19813	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
52	NC_020797	GCG	2	6	20868	20873	0 %	0 %	66.67 %	33.33 %	Non-Coding
53	NC_020797	CGA	2	6	21196	21201	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
54	NC_020797	CGG	2	6	21257	21262	0 %	0 %	66.67 %	33.33 %	Non-Coding
55	NC_020797	CGC	2	6	21905	21910	0 %	0 %	33.33 %	66.67 %	Non-Coding
56	NC_020797	CGG	2	6	21911	21916	0 %	0 %	66.67 %	33.33 %	Non-Coding
57	NC_020797	CGG	2	6	21931	21936	0 %	0 %	66.67 %	33.33 %	Non-Coding
58	NC_020797	GCG	2	6	22057	22062	0 %	0 %	66.67 %	33.33 %	Non-Coding
59	NC_020797	TAC	2	6	22573	22578	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_020797	CAG	2	6	23759	23764	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
61	NC_020797	ATG	2	6	23785	23790	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
62	NC_020797	CCG	2	6	24721	24726	0 %	0 %	33.33 %	66.67 %	Non-Coding
63	NC_020797	CAG	2	6	24983	24988	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
64	NC_020797	CAC	2	6	25245	25250	33.33 %	0 %	0 %	66.67 %	Non-Coding
65	NC_020797	TCG	2	6	25730	25735	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
66	NC_020797	GTC	2	6	25750	25755	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
67	NC_020797	CCG	3	9	25802	25810	0 %	0 %	33.33 %	66.67 %	Non-Coding
68	NC_020797	AGC	2	6	25817	25822	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
69	NC_020797	TCG	2	6	26159	26164	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
70	NC_020797	TCA	2	6	26210	26215	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
71	NC_020797	GAA	2	6	26232	26237	66.67 %	0 %	33.33 %	0 %	Non-Coding
72	NC_020797	CGA	2	6	26258	26263	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
73	NC_020797	ACC	2	6	26347	26352	33.33 %	0 %	0 %	66.67 %	Non-Coding
74	NC_020797	CGA	2	6	26395	26400	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
75	NC_020797	GCA	2	6	31534	31539	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
76	NC_020797	GAC	2	6	31541	31546	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
77	NC_020797	CGG	2	6	31552	31557	0 %	0 %	66.67 %	33.33 %	Non-Coding
78	NC_020797	GCC	2	6	31577	31582	0 %	0 %	33.33 %	66.67 %	Non-Coding
79	NC_020797	CAA	2	6	31725	31730	66.67 %	0 %	0 %	33.33 %	Non-Coding
80	NC_020797	GGT	2	6	31744	31749	0 %	33.33 %	66.67 %	0 %	Non-Coding
81	NC_020797	AAG	2	6	31766	31771	66.67 %	0 %	33.33 %	0 %	Non-Coding
82	NC_020797	CCG	2	6	31772	31777	0 %	0 %	33.33 %	66.67 %	Non-Coding
83	NC_020797	TTC	2	6	32200	32205	0 %	66.67 %	0 %	33.33 %	Non-Coding
84	NC_020797	GTC	2	6	32265	32270	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
85	NC_020797	AGT	2	6	32711	32716	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
86	NC_020797	CCG	2	6	32725	32730	0 %	0 %	33.33 %	66.67 %	Non-Coding
87	NC_020797	CCA	2	6	43121	43126	33.33 %	0 %	0 %	66.67 %	Non-Coding
88	NC_020797	CCT	2	6	44316	44321	0 %	33.33 %	0 %	66.67 %	Non-Coding
89	NC_020797	GCC	2	6	45031	45036	0 %	0 %	33.33 %	66.67 %	Non-Coding
90	NC_020797	CCA	2	6	46868	46873	33.33 %	0 %	0 %	66.67 %	Non-Coding
91	NC_020797	GTT	2	6	46874	46879	0 %	66.67 %	33.33 %	0 %	Non-Coding
92	NC_020797	AGT	2	6	46939	46944	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
93	NC_020797	TGT	2	6	46953	46958	0 %	66.67 %	33.33 %	0 %	Non-Coding
94	NC_020797	CGT	2	6	46985	46990	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
95	NC_020797	AGG	2	6	47063	47068	33.33 %	0 %	66.67 %	0 %	Non-Coding
96	NC_020797	CCG	2	6	47095	47100	0 %	0 %	33.33 %	66.67 %	Non-Coding
97	NC_020797	CGT	2	6	47187	47192	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
98	NC_020797	CGG	2	6	47333	47338	0 %	0 %	66.67 %	33.33 %	Non-Coding
99	NC_020797	GTT	2	6	48332	48337	0 %	66.67 %	33.33 %	0 %	Non-Coding
100	NC_020797	CAA	2	6	48374	48379	66.67 %	0 %	0 %	33.33 %	Non-Coding
101	NC_020797	GCC	2	6	48390	48395	0 %	0 %	33.33 %	66.67 %	Non-Coding
102	NC_020797	GTC	3	9	48477	48485	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
103	NC_020797	TTC	2	6	48531	48536	0 %	66.67 %	0 %	33.33 %	Non-Coding
104	NC_020797	GCC	2	6	48604	48609	0 %	0 %	33.33 %	66.67 %	Non-Coding
105	NC_020797	CGG	2	6	48690	48695	0 %	0 %	66.67 %	33.33 %	Non-Coding
106	NC_020797	TGG	2	6	48789	48794	0 %	33.33 %	66.67 %	0 %	Non-Coding
107	NC_020797	GGT	2	6	48812	48817	0 %	33.33 %	66.67 %	0 %	Non-Coding
108	NC_020797	TTC	2	6	48883	48888	0 %	66.67 %	0 %	33.33 %	Non-Coding
109	NC_020797	GCT	2	6	48931	48936	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
110	NC_020797	TGA	2	6	48962	48967	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
111	NC_020797	GGC	2	6	49141	49146	0 %	0 %	66.67 %	33.33 %	Non-Coding
112	NC_020797	CGC	2	6	49158	49163	0 %	0 %	33.33 %	66.67 %	Non-Coding
113	NC_020797	ACG	2	6	52709	52714	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
114	NC_020797	GTC	2	6	52743	52748	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
115	NC_020797	GCC	2	6	52755	52760	0 %	0 %	33.33 %	66.67 %	Non-Coding
116	NC_020797	GCA	2	6	52976	52981	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
117	NC_020797	ACG	2	6	53446	53451	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
118	NC_020797	GCG	2	6	53471	53476	0 %	0 %	66.67 %	33.33 %	Non-Coding
119	NC_020797	GCC	2	6	53540	53545	0 %	0 %	33.33 %	66.67 %	Non-Coding
120	NC_020797	CAG	2	6	53595	53600	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
121	NC_020797	CAC	2	6	53674	53679	33.33 %	0 %	0 %	66.67 %	Non-Coding
122	NC_020797	GTG	2	6	53702	53707	0 %	33.33 %	66.67 %	0 %	Non-Coding
123	NC_020797	AGT	2	6	53787	53792	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
124	NC_020797	GCC	2	6	53860	53865	0 %	0 %	33.33 %	66.67 %	Non-Coding
125	NC_020797	TCC	2	6	54031	54036	0 %	33.33 %	0 %	66.67 %	Non-Coding
126	NC_020797	GTC	2	6	54078	54083	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
127	NC_020797	CGG	2	6	54299	54304	0 %	0 %	66.67 %	33.33 %	Non-Coding
128	NC_020797	CGG	2	6	54327	54332	0 %	0 %	66.67 %	33.33 %	Non-Coding
129	NC_020797	CGG	2	6	54385	54390	0 %	0 %	66.67 %	33.33 %	Non-Coding
130	NC_020797	GTG	2	6	58532	58537	0 %	33.33 %	66.67 %	0 %	Non-Coding
131	NC_020797	CAA	2	6	63074	63079	66.67 %	0 %	0 %	33.33 %	Non-Coding
132	NC_020797	ATT	2	6	63118	63123	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.