MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Xanthomonas oryzae pv. oryzae MAFF 311018 chromosome

Total Repeats: 17148

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
17001	NC_007705	TCC	2	6	4910000	4910005	0 %	33.33 %	0 %	66.67 %	Non-Coding
17002	NC_007705	ATCC	2	8	4913201	4913208	25 %	25 %	0 %	50 %	Non-Coding
17003	NC_007705	GCC	2	6	4913356	4913361	0 %	0 %	33.33 %	66.67 %	Non-Coding
17004	NC_007705	CGG	4	12	4913407	4913418	0 %	0 %	66.67 %	33.33 %	Non-Coding
17005	NC_007705	GCC	2	6	4913475	4913480	0 %	0 %	33.33 %	66.67 %	Non-Coding
17006	NC_007705	CG	3	6	4913537	4913542	0 %	0 %	50 %	50 %	Non-Coding
17007	NC_007705	GGC	2	6	4913546	4913551	0 %	0 %	66.67 %	33.33 %	Non-Coding
17008	NC_007705	CG	3	6	4913574	4913579	0 %	0 %	50 %	50 %	Non-Coding
17009	NC_007705	CAG	2	6	4913605	4913610	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17010	NC_007705	GGT	2	6	4913679	4913684	0 %	33.33 %	66.67 %	0 %	Non-Coding
17011	NC_007705	TTG	2	6	4913690	4913695	0 %	66.67 %	33.33 %	0 %	Non-Coding
17012	NC_007705	TCA	2	6	4913708	4913713	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17013	NC_007705	GCT	2	6	4913759	4913764	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17014	NC_007705	AGCCA	2	10	4913811	4913820	40 %	0 %	20 %	40 %	Non-Coding
17015	NC_007705	GCG	2	6	4913821	4913826	0 %	0 %	66.67 %	33.33 %	Non-Coding
17016	NC_007705	AAT	2	6	4913834	4913839	66.67 %	33.33 %	0 %	0 %	Non-Coding
17017	NC_007705	TGG	2	6	4913898	4913903	0 %	33.33 %	66.67 %	0 %	Non-Coding
17018	NC_007705	ATTC	2	8	4913970	4913977	25 %	50 %	0 %	25 %	Non-Coding
17019	NC_007705	GTTT	2	8	4913994	4914001	0 %	75 %	25 %	0 %	Non-Coding
17020	NC_007705	T	6	6	4914023	4914028	0 %	100 %	0 %	0 %	Non-Coding
17021	NC_007705	TGT	2	6	4914085	4914090	0 %	66.67 %	33.33 %	0 %	Non-Coding
17022	NC_007705	A	6	6	4914101	4914106	100 %	0 %	0 %	0 %	Non-Coding
17023	NC_007705	TTC	2	6	4914160	4914165	0 %	66.67 %	0 %	33.33 %	Non-Coding
17024	NC_007705	TTC	2	6	4914301	4914306	0 %	66.67 %	0 %	33.33 %	Non-Coding
17025	NC_007705	CCA	2	6	4915206	4915211	33.33 %	0 %	0 %	66.67 %	Non-Coding
17026	NC_007705	CAG	2	6	4915276	4915281	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17027	NC_007705	CAG	3	9	4915305	4915313	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17028	NC_007705	ACG	2	6	4915321	4915326	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17029	NC_007705	GCAG	2	8	4915368	4915375	25 %	0 %	50 %	25 %	Non-Coding
17030	NC_007705	GA	3	6	4915843	4915848	50 %	0 %	50 %	0 %	Non-Coding
17031	NC_007705	GAT	2	6	4915872	4915877	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17032	NC_007705	TGC	2	6	4916334	4916339	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17033	NC_007705	GCC	2	6	4916358	4916363	0 %	0 %	33.33 %	66.67 %	Non-Coding
17034	NC_007705	CG	4	8	4916364	4916371	0 %	0 %	50 %	50 %	Non-Coding
17035	NC_007705	CGGC	2	8	4916390	4916397	0 %	0 %	50 %	50 %	Non-Coding
17036	NC_007705	ATGCGT	2	12	4916409	4916420	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
17037	NC_007705	GCC	2	6	4916447	4916452	0 %	0 %	33.33 %	66.67 %	Non-Coding
17038	NC_007705	GT	3	6	4916476	4916481	0 %	50 %	50 %	0 %	Non-Coding
17039	NC_007705	CGA	2	6	4916517	4916522	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17040	NC_007705	ACC	2	6	4916545	4916550	33.33 %	0 %	0 %	66.67 %	Non-Coding
17041	NC_007705	GC	4	8	4916579	4916586	0 %	0 %	50 %	50 %	Non-Coding
17042	NC_007705	TCG	2	6	4916589	4916594	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17043	NC_007705	TCT	2	6	4916612	4916617	0 %	66.67 %	0 %	33.33 %	Non-Coding
17044	NC_007705	CG	3	6	4917352	4917357	0 %	0 %	50 %	50 %	Non-Coding
17045	NC_007705	GCG	2	6	4917376	4917381	0 %	0 %	66.67 %	33.33 %	Non-Coding
17046	NC_007705	CTTG	2	8	4917395	4917402	0 %	50 %	25 %	25 %	Non-Coding
17047	NC_007705	TGCCG	2	10	4917404	4917413	0 %	20 %	40 %	40 %	Non-Coding
17048	NC_007705	GCTG	2	8	4917441	4917448	0 %	25 %	50 %	25 %	Non-Coding
17049	NC_007705	AC	3	6	4917462	4917467	50 %	0 %	0 %	50 %	Non-Coding
17050	NC_007705	CG	3	6	4917495	4917500	0 %	0 %	50 %	50 %	Non-Coding
17051	NC_007705	ATG	2	6	4917501	4917506	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17052	NC_007705	CG	3	6	4917563	4917568	0 %	0 %	50 %	50 %	Non-Coding
17053	NC_007705	CTTG	2	8	4917621	4917628	0 %	50 %	25 %	25 %	Non-Coding
17054	NC_007705	GAA	2	6	4917633	4917638	66.67 %	0 %	33.33 %	0 %	Non-Coding
17055	NC_007705	GGCT	2	8	4917885	4917892	0 %	25 %	50 %	25 %	Non-Coding
17056	NC_007705	CA	3	6	4917935	4917940	50 %	0 %	0 %	50 %	Non-Coding
17057	NC_007705	CGG	2	6	4917943	4917948	0 %	0 %	66.67 %	33.33 %	Non-Coding
17058	NC_007705	CGC	2	6	4917976	4917981	0 %	0 %	33.33 %	66.67 %	Non-Coding
17059	NC_007705	A	6	6	4918031	4918036	100 %	0 %	0 %	0 %	Non-Coding
17060	NC_007705	CCA	2	6	4918038	4918043	33.33 %	0 %	0 %	66.67 %	Non-Coding
17061	NC_007705	GGTG	2	8	4918053	4918060	0 %	25 %	75 %	0 %	Non-Coding
17062	NC_007705	TG	4	8	4918065	4918072	0 %	50 %	50 %	0 %	Non-Coding
17063	NC_007705	CG	3	6	4918087	4918092	0 %	0 %	50 %	50 %	Non-Coding
17064	NC_007705	GTG	3	9	4918104	4918112	0 %	33.33 %	66.67 %	0 %	Non-Coding
17065	NC_007705	TGCGC	2	10	4918135	4918144	0 %	20 %	40 %	40 %	Non-Coding
17066	NC_007705	GC	3	6	4918147	4918152	0 %	0 %	50 %	50 %	Non-Coding
17067	NC_007705	G	6	6	4918189	4918194	0 %	0 %	100 %	0 %	Non-Coding
17068	NC_007705	ATGCA	2	10	4918204	4918213	40 %	20 %	20 %	20 %	Non-Coding
17069	NC_007705	GTC	2	6	4918215	4918220	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17070	NC_007705	GGC	2	6	4918234	4918239	0 %	0 %	66.67 %	33.33 %	Non-Coding
17071	NC_007705	GTG	2	6	4918240	4918245	0 %	33.33 %	66.67 %	0 %	Non-Coding
17072	NC_007705	GCCC	2	8	4918274	4918281	0 %	0 %	25 %	75 %	Non-Coding
17073	NC_007705	TGC	3	9	4918315	4918323	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17074	NC_007705	TTGG	2	8	4918350	4918357	0 %	50 %	50 %	0 %	Non-Coding
17075	NC_007705	ATGCG	2	10	4918486	4918495	20 %	20 %	40 %	20 %	Non-Coding
17076	NC_007705	GGCA	2	8	4918510	4918517	25 %	0 %	50 %	25 %	Non-Coding
17077	NC_007705	CAAC	2	8	4918535	4918542	50 %	0 %	0 %	50 %	Non-Coding
17078	NC_007705	G	7	7	4918820	4918826	0 %	0 %	100 %	0 %	Non-Coding
17079	NC_007705	GAA	2	6	4918862	4918867	66.67 %	0 %	33.33 %	0 %	Non-Coding
17080	NC_007705	GCA	2	6	4918894	4918899	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17081	NC_007705	CGG	2	6	4918945	4918950	0 %	0 %	66.67 %	33.33 %	Non-Coding
17082	NC_007705	GGC	2	6	4919024	4919029	0 %	0 %	66.67 %	33.33 %	Non-Coding
17083	NC_007705	GC	3	6	4919062	4919067	0 %	0 %	50 %	50 %	Non-Coding
17084	NC_007705	GTG	2	6	4919075	4919080	0 %	33.33 %	66.67 %	0 %	Non-Coding
17085	NC_007705	GAT	2	6	4919676	4919681	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17086	NC_007705	CG	3	6	4919688	4919693	0 %	0 %	50 %	50 %	Non-Coding
17087	NC_007705	GA	3	6	4919760	4919765	50 %	0 %	50 %	0 %	Non-Coding
17088	NC_007705	GT	3	6	4919804	4919809	0 %	50 %	50 %	0 %	Non-Coding
17089	NC_007705	CCG	2	6	4919868	4919873	0 %	0 %	33.33 %	66.67 %	Non-Coding
17090	NC_007705	GC	4	8	4919892	4919899	0 %	0 %	50 %	50 %	Non-Coding
17091	NC_007705	CGC	2	6	4919950	4919955	0 %	0 %	33.33 %	66.67 %	Non-Coding
17092	NC_007705	TGC	2	6	4919970	4919975	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17093	NC_007705	GGAC	2	8	4921162	4921169	25 %	0 %	50 %	25 %	Non-Coding
17094	NC_007705	TCG	3	9	4922581	4922589	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17095	NC_007705	TGCG	2	8	4922602	4922609	0 %	25 %	50 %	25 %	Non-Coding
17096	NC_007705	GCT	2	6	4922716	4922721	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17097	NC_007705	CCG	2	6	4922767	4922772	0 %	0 %	33.33 %	66.67 %	Non-Coding
17098	NC_007705	GCA	2	6	4922781	4922786	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17099	NC_007705	CG	3	6	4922802	4922807	0 %	0 %	50 %	50 %	Non-Coding
17100	NC_007705	CAC	2	6	4922839	4922844	33.33 %	0 %	0 %	66.67 %	Non-Coding
17101	NC_007705	GC	3	6	4924222	4924227	0 %	0 %	50 %	50 %	Non-Coding
17102	NC_007705	CG	4	8	4924313	4924320	0 %	0 %	50 %	50 %	Non-Coding
17103	NC_007705	GC	4	8	4924365	4924372	0 %	0 %	50 %	50 %	Non-Coding
17104	NC_007705	CG	3	6	4924382	4924387	0 %	0 %	50 %	50 %	Non-Coding
17105	NC_007705	CGA	2	6	4924763	4924768	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17106	NC_007705	CTGC	2	8	4924791	4924798	0 %	25 %	25 %	50 %	Non-Coding
17107	NC_007705	GCG	2	6	4926035	4926040	0 %	0 %	66.67 %	33.33 %	Non-Coding
17108	NC_007705	CCG	2	6	4926139	4926144	0 %	0 %	33.33 %	66.67 %	Non-Coding
17109	NC_007705	CCG	2	6	4926223	4926228	0 %	0 %	33.33 %	66.67 %	Non-Coding
17110	NC_007705	TGG	2	6	4927253	4927258	0 %	33.33 %	66.67 %	0 %	Non-Coding
17111	NC_007705	GCG	2	6	4927265	4927270	0 %	0 %	66.67 %	33.33 %	Non-Coding
17112	NC_007705	GGA	2	6	4927300	4927305	33.33 %	0 %	66.67 %	0 %	Non-Coding
17113	NC_007705	TCT	2	6	4927325	4927330	0 %	66.67 %	0 %	33.33 %	Non-Coding
17114	NC_007705	T	6	6	4927349	4927354	0 %	100 %	0 %	0 %	Non-Coding
17115	NC_007705	GGC	2	6	4927421	4927426	0 %	0 %	66.67 %	33.33 %	Non-Coding
17116	NC_007705	GCG	2	6	4927485	4927490	0 %	0 %	66.67 %	33.33 %	Non-Coding
17117	NC_007705	CGC	2	6	4927524	4927529	0 %	0 %	33.33 %	66.67 %	Non-Coding
17118	NC_007705	CGC	2	6	4927576	4927581	0 %	0 %	33.33 %	66.67 %	Non-Coding
17119	NC_007705	T	6	6	4928385	4928390	0 %	100 %	0 %	0 %	Non-Coding
17120	NC_007705	CCG	2	6	4928398	4928403	0 %	0 %	33.33 %	66.67 %	Non-Coding
17121	NC_007705	GC	3	6	4928447	4928452	0 %	0 %	50 %	50 %	Non-Coding
17122	NC_007705	GC	3	6	4928489	4928494	0 %	0 %	50 %	50 %	Non-Coding
17123	NC_007705	TC	3	6	4929614	4929619	0 %	50 %	0 %	50 %	Non-Coding
17124	NC_007705	GGC	2	6	4929675	4929680	0 %	0 %	66.67 %	33.33 %	Non-Coding
17125	NC_007705	CCG	2	6	4929727	4929732	0 %	0 %	33.33 %	66.67 %	Non-Coding
17126	NC_007705	CG	3	6	4929741	4929746	0 %	0 %	50 %	50 %	Non-Coding
17127	NC_007705	TCGA	2	8	4929779	4929786	25 %	25 %	25 %	25 %	Non-Coding
17128	NC_007705	CCG	2	6	4931616	4931621	0 %	0 %	33.33 %	66.67 %	Non-Coding
17129	NC_007705	TGG	2	6	4931674	4931679	0 %	33.33 %	66.67 %	0 %	Non-Coding
17130	NC_007705	CGT	2	6	4932286	4932291	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17131	NC_007705	GCG	2	6	4933207	4933212	0 %	0 %	66.67 %	33.33 %	Non-Coding
17132	NC_007705	GCC	2	6	4933242	4933247	0 %	0 %	33.33 %	66.67 %	Non-Coding
17133	NC_007705	AGC	2	6	4933248	4933253	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17134	NC_007705	GGT	2	6	4933266	4933271	0 %	33.33 %	66.67 %	0 %	Non-Coding
17135	NC_007705	CATC	2	8	4934787	4934794	25 %	25 %	0 %	50 %	Non-Coding
17136	NC_007705	CTG	2	6	4934815	4934820	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17137	NC_007705	CGGC	2	8	4934843	4934850	0 %	0 %	50 %	50 %	Non-Coding
17138	NC_007705	ACA	2	6	4937581	4937586	66.67 %	0 %	0 %	33.33 %	Non-Coding
17139	NC_007705	GCG	2	6	4937618	4937623	0 %	0 %	66.67 %	33.33 %	Non-Coding
17140	NC_007705	CTT	2	6	4937627	4937632	0 %	66.67 %	0 %	33.33 %	Non-Coding
17141	NC_007705	GCA	2	6	4939377	4939382	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17142	NC_007705	GCG	2	6	4939863	4939868	0 %	0 %	66.67 %	33.33 %	Non-Coding
17143	NC_007705	CAA	2	6	4940081	4940086	66.67 %	0 %	0 %	33.33 %	Non-Coding
17144	NC_007705	CG	3	6	4940089	4940094	0 %	0 %	50 %	50 %	Non-Coding
17145	NC_007705	CGC	2	6	4940098	4940103	0 %	0 %	33.33 %	66.67 %	Non-Coding
17146	NC_007705	GCTGAC	2	12	4940105	4940116	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
17147	NC_007705	CGC	2	6	4940117	4940122	0 %	0 %	33.33 %	66.67 %	Non-Coding
17148	NC_007705	TGGA	2	8	4940126	4940133	25 %	25 %	50 %	0 %	Non-Coding

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