MICAS: Microsatellite Analysis Server 3.0

All Repeats of Xylella fastidiosa M23 chromosome

Total Repeats: 53573

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
53501	NC_010577	TTC	2	6	2532335	2532340	0 %	66.67 %	0 %	33.33 %	182682730
53502	NC_010577	GT	3	6	2532394	2532399	0 %	50 %	50 %	0 %	182682730
53503	NC_010577	ACG	2	6	2532404	2532409	33.33 %	0 %	33.33 %	33.33 %	182682730
53504	NC_010577	TAA	2	6	2532445	2532450	66.67 %	33.33 %	0 %	0 %	182682730
53505	NC_010577	ATAG	2	8	2532477	2532484	50 %	25 %	25 %	0 %	182682730
53506	NC_010577	GGA	2	6	2532656	2532661	33.33 %	0 %	66.67 %	0 %	182682730
53507	NC_010577	AAGC	2	8	2532715	2532722	50 %	0 %	25 %	25 %	182682730
53508	NC_010577	CAT	2	6	2532829	2532834	33.33 %	33.33 %	0 %	33.33 %	182682730
53509	NC_010577	ATA	2	6	2532849	2532854	66.67 %	33.33 %	0 %	0 %	182682730
53510	NC_010577	TGT	2	6	2532906	2532911	0 %	66.67 %	33.33 %	0 %	182682730
53511	NC_010577	ATG	2	6	2532923	2532928	33.33 %	33.33 %	33.33 %	0 %	182682730
53512	NC_010577	TTGA	2	8	2532979	2532986	25 %	50 %	25 %	0 %	182682730
53513	NC_010577	TAA	2	6	2533028	2533033	66.67 %	33.33 %	0 %	0 %	182682730
53514	NC_010577	TAA	3	9	2533076	2533084	66.67 %	33.33 %	0 %	0 %	Non-Coding
53515	NC_010577	AT	3	6	2533099	2533104	50 %	50 %	0 %	0 %	Non-Coding
53516	NC_010577	AAT	2	6	2533111	2533116	66.67 %	33.33 %	0 %	0 %	Non-Coding
53517	NC_010577	GA	3	6	2533121	2533126	50 %	0 %	50 %	0 %	Non-Coding
53518	NC_010577	ATA	2	6	2533146	2533151	66.67 %	33.33 %	0 %	0 %	Non-Coding
53519	NC_010577	ATT	2	6	2533152	2533157	33.33 %	66.67 %	0 %	0 %	182682731
53520	NC_010577	TC	3	6	2533164	2533169	0 %	50 %	0 %	50 %	182682731
53521	NC_010577	ATC	2	6	2533205	2533210	33.33 %	33.33 %	0 %	33.33 %	182682731
53522	NC_010577	ACC	2	6	2533234	2533239	33.33 %	0 %	0 %	66.67 %	182682731
53523	NC_010577	CAT	2	6	2533282	2533287	33.33 %	33.33 %	0 %	33.33 %	182682731
53524	NC_010577	CAT	2	6	2533315	2533320	33.33 %	33.33 %	0 %	33.33 %	182682731
53525	NC_010577	CG	3	6	2533419	2533424	0 %	0 %	50 %	50 %	182682731
53526	NC_010577	CAAC	2	8	2533479	2533486	50 %	0 %	0 %	50 %	182682731
53527	NC_010577	CACC	2	8	2533535	2533542	25 %	0 %	0 %	75 %	182682731
53528	NC_010577	T	6	6	2533554	2533559	0 %	100 %	0 %	0 %	182682731
53529	NC_010577	TA	3	6	2533566	2533571	50 %	50 %	0 %	0 %	182682731
53530	NC_010577	CAT	2	6	2533576	2533581	33.33 %	33.33 %	0 %	33.33 %	182682731
53531	NC_010577	GCT	2	6	2533626	2533631	0 %	33.33 %	33.33 %	33.33 %	182682731
53532	NC_010577	CAAT	2	8	2533794	2533801	50 %	25 %	0 %	25 %	182682731
53533	NC_010577	CAA	2	6	2533827	2533832	66.67 %	0 %	0 %	33.33 %	182682731
53534	NC_010577	GACC	2	8	2533884	2533891	25 %	0 %	25 %	50 %	182682731
53535	NC_010577	CGT	2	6	2533906	2533911	0 %	33.33 %	33.33 %	33.33 %	182682731
53536	NC_010577	TAA	2	6	2533984	2533989	66.67 %	33.33 %	0 %	0 %	182682731
53537	NC_010577	A	6	6	2534030	2534035	100 %	0 %	0 %	0 %	182682731
53538	NC_010577	ACC	3	9	2534059	2534067	33.33 %	0 %	0 %	66.67 %	182682731
53539	NC_010577	CAT	2	6	2534088	2534093	33.33 %	33.33 %	0 %	33.33 %	182682731
53540	NC_010577	ACC	2	6	2534125	2534130	33.33 %	0 %	0 %	66.67 %	182682731
53541	NC_010577	CG	3	6	2534185	2534190	0 %	0 %	50 %	50 %	182682731
53542	NC_010577	TAGGTA	2	12	2534202	2534213	33.33 %	33.33 %	33.33 %	0 %	182682731
53543	NC_010577	GCT	2	6	2534409	2534414	0 %	33.33 %	33.33 %	33.33 %	182682731
53544	NC_010577	GAA	2	6	2534418	2534423	66.67 %	0 %	33.33 %	0 %	182682731
53545	NC_010577	AGT	2	6	2534470	2534475	33.33 %	33.33 %	33.33 %	0 %	182682731
53546	NC_010577	ATC	2	6	2534497	2534502	33.33 %	33.33 %	0 %	33.33 %	182682731
53547	NC_010577	TAA	2	6	2534554	2534559	66.67 %	33.33 %	0 %	0 %	182682731
53548	NC_010577	CAG	2	6	2534562	2534567	33.33 %	0 %	33.33 %	33.33 %	182682731
53549	NC_010577	GTT	2	6	2534609	2534614	0 %	66.67 %	33.33 %	0 %	182682731
53550	NC_010577	AGC	2	6	2534638	2534643	33.33 %	0 %	33.33 %	33.33 %	182682731
53551	NC_010577	AATT	2	8	2534647	2534654	50 %	50 %	0 %	0 %	182682731
53552	NC_010577	CTCCAA	2	12	2534707	2534718	33.33 %	16.67 %	0 %	50 %	182682731
53553	NC_010577	ATTTTT	2	12	2534767	2534778	16.67 %	83.33 %	0 %	0 %	182682731
53554	NC_010577	ATCC	2	8	2534785	2534792	25 %	25 %	0 %	50 %	182682731
53555	NC_010577	TTTA	2	8	2534894	2534901	25 %	75 %	0 %	0 %	182682732
53556	NC_010577	GAA	2	6	2534919	2534924	66.67 %	0 %	33.33 %	0 %	182682732
53557	NC_010577	GCA	2	6	2534927	2534932	33.33 %	0 %	33.33 %	33.33 %	182682732
53558	NC_010577	AAC	2	6	2535036	2535041	66.67 %	0 %	0 %	33.33 %	182682732
53559	NC_010577	AACT	2	8	2535060	2535067	50 %	25 %	0 %	25 %	182682732
53560	NC_010577	CGATTA	2	12	2535112	2535123	33.33 %	33.33 %	16.67 %	16.67 %	182682732
53561	NC_010577	ACT	2	6	2535151	2535156	33.33 %	33.33 %	0 %	33.33 %	182682732
53562	NC_010577	GAT	2	6	2535188	2535193	33.33 %	33.33 %	33.33 %	0 %	182682732
53563	NC_010577	ATA	2	6	2535243	2535248	66.67 %	33.33 %	0 %	0 %	182682732
53564	NC_010577	CAAA	2	8	2535258	2535265	75 %	0 %	0 %	25 %	182682732
53565	NC_010577	TTAA	2	8	2535357	2535364	50 %	50 %	0 %	0 %	182682733
53566	NC_010577	ACG	2	6	2535391	2535396	33.33 %	0 %	33.33 %	33.33 %	182682733
53567	NC_010577	ACGCTT	2	12	2535454	2535465	16.67 %	33.33 %	16.67 %	33.33 %	182682733
53568	NC_010577	TGG	2	6	2535492	2535497	0 %	33.33 %	66.67 %	0 %	182682733
53569	NC_010577	CTAT	2	8	2535517	2535524	25 %	50 %	0 %	25 %	Non-Coding
53570	NC_010577	AGG	2	6	2535575	2535580	33.33 %	0 %	66.67 %	0 %	Non-Coding
53571	NC_010577	AT	3	6	2535594	2535599	50 %	50 %	0 %	0 %	Non-Coding
53572	NC_010577	GCT	2	6	2535663	2535668	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53573	NC_010577	CAT	2	6	2535673	2535678	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.