MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Verminephrobacter eiseniae EF01-2 chromosome

Total Repeats: 13612

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
13501	NC_008786	GGCCCA	2	12	5519668	5519679	16.67 %	0 %	33.33 %	50 %	Non-Coding
13502	NC_008786	GGCAC	2	10	5519692	5519701	20 %	0 %	40 %	40 %	Non-Coding
13503	NC_008786	CCG	2	6	5519709	5519714	0 %	0 %	33.33 %	66.67 %	Non-Coding
13504	NC_008786	GAC	2	6	5519738	5519743	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13505	NC_008786	GGC	2	6	5519744	5519749	0 %	0 %	66.67 %	33.33 %	Non-Coding
13506	NC_008786	GC	3	6	5519805	5519810	0 %	0 %	50 %	50 %	Non-Coding
13507	NC_008786	GGCG	2	8	5525317	5525324	0 %	0 %	75 %	25 %	Non-Coding
13508	NC_008786	GGC	2	6	5525358	5525363	0 %	0 %	66.67 %	33.33 %	Non-Coding
13509	NC_008786	GC	4	8	5525429	5525436	0 %	0 %	50 %	50 %	Non-Coding
13510	NC_008786	CGAC	2	8	5525459	5525466	25 %	0 %	25 %	50 %	Non-Coding
13511	NC_008786	GCC	2	6	5527944	5527949	0 %	0 %	33.33 %	66.67 %	Non-Coding
13512	NC_008786	CCA	2	6	5527952	5527957	33.33 %	0 %	0 %	66.67 %	Non-Coding
13513	NC_008786	CCG	2	6	5528500	5528505	0 %	0 %	33.33 %	66.67 %	Non-Coding
13514	NC_008786	CCA	2	6	5528530	5528535	33.33 %	0 %	0 %	66.67 %	Non-Coding
13515	NC_008786	CAT	2	6	5528598	5528603	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13516	NC_008786	CCTTC	2	10	5529279	5529288	0 %	40 %	0 %	60 %	Non-Coding
13517	NC_008786	TGC	2	6	5529341	5529346	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13518	NC_008786	TGC	2	6	5529360	5529365	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13519	NC_008786	ACC	2	6	5529391	5529396	33.33 %	0 %	0 %	66.67 %	Non-Coding
13520	NC_008786	TCGA	2	8	5529425	5529432	25 %	25 %	25 %	25 %	Non-Coding
13521	NC_008786	TCC	2	6	5529447	5529452	0 %	33.33 %	0 %	66.67 %	Non-Coding
13522	NC_008786	GGC	2	6	5529856	5529861	0 %	0 %	66.67 %	33.33 %	Non-Coding
13523	NC_008786	C	7	7	5529872	5529878	0 %	0 %	0 %	100 %	Non-Coding
13524	NC_008786	ACA	2	6	5529921	5529926	66.67 %	0 %	0 %	33.33 %	Non-Coding
13525	NC_008786	CAT	2	6	5529947	5529952	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13526	NC_008786	ATG	2	6	5529958	5529963	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13527	NC_008786	AGG	2	6	5544176	5544181	33.33 %	0 %	66.67 %	0 %	Non-Coding
13528	NC_008786	AGG	2	6	5544183	5544188	33.33 %	0 %	66.67 %	0 %	Non-Coding
13529	NC_008786	GC	3	6	5544195	5544200	0 %	0 %	50 %	50 %	Non-Coding
13530	NC_008786	GCCGC	2	10	5544258	5544267	0 %	0 %	40 %	60 %	Non-Coding
13531	NC_008786	TCC	2	6	5544312	5544317	0 %	33.33 %	0 %	66.67 %	Non-Coding
13532	NC_008786	GCCT	2	8	5544342	5544349	0 %	25 %	25 %	50 %	Non-Coding
13533	NC_008786	CGATAT	2	12	5544365	5544376	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
13534	NC_008786	TGAA	2	8	5544419	5544426	50 %	25 %	25 %	0 %	Non-Coding
13535	NC_008786	GGT	2	6	5544429	5544434	0 %	33.33 %	66.67 %	0 %	Non-Coding
13536	NC_008786	TCA	2	6	5544446	5544451	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13537	NC_008786	CAG	2	6	5544478	5544483	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13538	NC_008786	GCC	2	6	5544517	5544522	0 %	0 %	33.33 %	66.67 %	Non-Coding
13539	NC_008786	GC	3	6	5544537	5544542	0 %	0 %	50 %	50 %	Non-Coding
13540	NC_008786	GAT	2	6	5544553	5544558	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13541	NC_008786	GGC	2	6	5544568	5544573	0 %	0 %	66.67 %	33.33 %	Non-Coding
13542	NC_008786	GCC	2	6	5544670	5544675	0 %	0 %	33.33 %	66.67 %	Non-Coding
13543	NC_008786	GGGC	2	8	5544764	5544771	0 %	0 %	75 %	25 %	Non-Coding
13544	NC_008786	CG	3	6	5544817	5544822	0 %	0 %	50 %	50 %	Non-Coding
13545	NC_008786	GCA	2	6	5544870	5544875	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13546	NC_008786	CCT	2	6	5545026	5545031	0 %	33.33 %	0 %	66.67 %	Non-Coding
13547	NC_008786	GCCC	2	8	5545093	5545100	0 %	0 %	25 %	75 %	Non-Coding
13548	NC_008786	GGAA	2	8	5545143	5545150	50 %	0 %	50 %	0 %	Non-Coding
13549	NC_008786	GCAA	2	8	5545227	5545234	50 %	0 %	25 %	25 %	Non-Coding
13550	NC_008786	GCA	2	6	5545257	5545262	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13551	NC_008786	CGA	2	6	5545315	5545320	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13552	NC_008786	AAGA	2	8	5545376	5545383	75 %	0 %	25 %	0 %	Non-Coding
13553	NC_008786	GCA	3	9	5545484	5545492	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13554	NC_008786	ACG	2	6	5545521	5545526	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13555	NC_008786	ACC	2	6	5545584	5545589	33.33 %	0 %	0 %	66.67 %	Non-Coding
13556	NC_008786	GAAA	2	8	5545649	5545656	75 %	0 %	25 %	0 %	Non-Coding
13557	NC_008786	GAA	2	6	5545739	5545744	66.67 %	0 %	33.33 %	0 %	Non-Coding
13558	NC_008786	GAT	2	6	5545752	5545757	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13559	NC_008786	GAA	2	6	5545765	5545770	66.67 %	0 %	33.33 %	0 %	Non-Coding
13560	NC_008786	ACC	2	6	5545771	5545776	33.33 %	0 %	0 %	66.67 %	Non-Coding
13561	NC_008786	ATC	2	6	5545850	5545855	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13562	NC_008786	CCAT	2	8	5545861	5545868	25 %	25 %	0 %	50 %	Non-Coding
13563	NC_008786	CAG	3	9	5545874	5545882	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13564	NC_008786	TGC	2	6	5545926	5545931	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13565	NC_008786	TCG	2	6	5546004	5546009	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13566	NC_008786	GCG	2	6	5546027	5546032	0 %	0 %	66.67 %	33.33 %	Non-Coding
13567	NC_008786	GAAA	2	8	5546082	5546089	75 %	0 %	25 %	0 %	Non-Coding
13568	NC_008786	CAC	2	6	5546127	5546132	33.33 %	0 %	0 %	66.67 %	Non-Coding
13569	NC_008786	CGA	2	6	5546175	5546180	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13570	NC_008786	CCT	2	6	5546799	5546804	0 %	33.33 %	0 %	66.67 %	Non-Coding
13571	NC_008786	CAA	2	6	5546837	5546842	66.67 %	0 %	0 %	33.33 %	Non-Coding
13572	NC_008786	TGC	2	6	5546921	5546926	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13573	NC_008786	GCA	4	12	5547298	5547309	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13574	NC_008786	CGC	2	6	5551397	5551402	0 %	0 %	33.33 %	66.67 %	Non-Coding
13575	NC_008786	TGC	2	6	5551430	5551435	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13576	NC_008786	GCC	2	6	5551440	5551445	0 %	0 %	33.33 %	66.67 %	Non-Coding
13577	NC_008786	GCG	2	6	5551477	5551482	0 %	0 %	66.67 %	33.33 %	Non-Coding
13578	NC_008786	GGC	2	6	5551488	5551493	0 %	0 %	66.67 %	33.33 %	Non-Coding
13579	NC_008786	GC	3	6	5554225	5554230	0 %	0 %	50 %	50 %	Non-Coding
13580	NC_008786	GCTGC	2	10	5554261	5554270	0 %	20 %	40 %	40 %	Non-Coding
13581	NC_008786	C	13	13	5555257	5555269	0 %	0 %	0 %	100 %	Non-Coding
13582	NC_008786	GAA	2	6	5555302	5555307	66.67 %	0 %	33.33 %	0 %	Non-Coding
13583	NC_008786	TGCGC	2	10	5556568	5556577	0 %	20 %	40 %	40 %	Non-Coding
13584	NC_008786	GC	3	6	5556588	5556593	0 %	0 %	50 %	50 %	Non-Coding
13585	NC_008786	C	7	7	5556638	5556644	0 %	0 %	0 %	100 %	Non-Coding
13586	NC_008786	CGG	2	6	5556653	5556658	0 %	0 %	66.67 %	33.33 %	Non-Coding
13587	NC_008786	CGG	2	6	5556663	5556668	0 %	0 %	66.67 %	33.33 %	Non-Coding
13588	NC_008786	GGC	2	6	5556709	5556714	0 %	0 %	66.67 %	33.33 %	Non-Coding
13589	NC_008786	TCGT	2	8	5556780	5556787	0 %	50 %	25 %	25 %	Non-Coding
13590	NC_008786	TCC	2	6	5556828	5556833	0 %	33.33 %	0 %	66.67 %	Non-Coding
13591	NC_008786	GCC	2	6	5556849	5556854	0 %	0 %	33.33 %	66.67 %	Non-Coding
13592	NC_008786	CCGG	2	8	5556887	5556894	0 %	0 %	50 %	50 %	Non-Coding
13593	NC_008786	CTGCG	2	10	5556972	5556981	0 %	20 %	40 %	40 %	Non-Coding
13594	NC_008786	ACGA	2	8	5556993	5557000	50 %	0 %	25 %	25 %	Non-Coding
13595	NC_008786	GGAAT	2	10	5557005	5557014	40 %	20 %	40 %	0 %	Non-Coding
13596	NC_008786	C	6	6	5557032	5557037	0 %	0 %	0 %	100 %	Non-Coding
13597	NC_008786	CG	4	8	5559488	5559495	0 %	0 %	50 %	50 %	Non-Coding
13598	NC_008786	CGG	2	6	5560026	5560031	0 %	0 %	66.67 %	33.33 %	Non-Coding
13599	NC_008786	GGT	2	6	5560036	5560041	0 %	33.33 %	66.67 %	0 %	Non-Coding
13600	NC_008786	GCAG	2	8	5560072	5560079	25 %	0 %	50 %	25 %	Non-Coding
13601	NC_008786	GCC	2	6	5560084	5560089	0 %	0 %	33.33 %	66.67 %	Non-Coding
13602	NC_008786	GCCC	2	8	5560103	5560110	0 %	0 %	25 %	75 %	Non-Coding
13603	NC_008786	CGG	2	6	5560182	5560187	0 %	0 %	66.67 %	33.33 %	Non-Coding
13604	NC_008786	GTCG	3	12	5560196	5560207	0 %	25 %	50 %	25 %	Non-Coding
13605	NC_008786	GGCG	2	8	5560208	5560215	0 %	0 %	75 %	25 %	Non-Coding
13606	NC_008786	ACG	2	6	5560227	5560232	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13607	NC_008786	CG	3	6	5561623	5561628	0 %	0 %	50 %	50 %	Non-Coding
13608	NC_008786	CG	3	6	5561644	5561649	0 %	0 %	50 %	50 %	Non-Coding
13609	NC_008786	CTT	2	6	5561670	5561675	0 %	66.67 %	0 %	33.33 %	Non-Coding
13610	NC_008786	ATC	2	6	5561681	5561686	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13611	NC_008786	GCAC	2	8	5561714	5561721	25 %	0 %	25 %	50 %	Non-Coding
13612	NC_008786	GCG	2	6	5566589	5566594	0 %	0 %	66.67 %	33.33 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.