MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Thermobispora bispora DSM 43833 chromosome

Total Repeats: 19148

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
19001	NC_014165	CT	3	6	4158623	4158628	0 %	50 %	0 %	50 %	Non-Coding
19002	NC_014165	CGGC	2	8	4158677	4158684	0 %	0 %	50 %	50 %	Non-Coding
19003	NC_014165	CGG	2	6	4158691	4158696	0 %	0 %	66.67 %	33.33 %	Non-Coding
19004	NC_014165	CGA	2	6	4158722	4158727	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19005	NC_014165	CGG	2	6	4158732	4158737	0 %	0 %	66.67 %	33.33 %	Non-Coding
19006	NC_014165	GCCG	2	8	4158781	4158788	0 %	0 %	50 %	50 %	Non-Coding
19007	NC_014165	GCT	2	6	4158806	4158811	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19008	NC_014165	ACT	2	6	4158830	4158835	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19009	NC_014165	TCG	2	6	4158846	4158851	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19010	NC_014165	TGG	2	6	4158885	4158890	0 %	33.33 %	66.67 %	0 %	Non-Coding
19011	NC_014165	CCA	2	6	4158942	4158947	33.33 %	0 %	0 %	66.67 %	Non-Coding
19012	NC_014165	CG	3	6	4158980	4158985	0 %	0 %	50 %	50 %	Non-Coding
19013	NC_014165	CGC	2	6	4158999	4159004	0 %	0 %	33.33 %	66.67 %	Non-Coding
19014	NC_014165	TGCC	2	8	4159026	4159033	0 %	25 %	25 %	50 %	Non-Coding
19015	NC_014165	GGC	2	6	4159040	4159045	0 %	0 %	66.67 %	33.33 %	Non-Coding
19016	NC_014165	GCCG	2	8	4159062	4159069	0 %	0 %	50 %	50 %	Non-Coding
19017	NC_014165	ACG	2	6	4159108	4159113	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19018	NC_014165	CG	3	6	4159156	4159161	0 %	0 %	50 %	50 %	Non-Coding
19019	NC_014165	GTCC	2	8	4159179	4159186	0 %	25 %	25 %	50 %	Non-Coding
19020	NC_014165	TCG	2	6	4159190	4159195	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19021	NC_014165	GCCG	2	8	4159199	4159206	0 %	0 %	50 %	50 %	Non-Coding
19022	NC_014165	GC	3	6	4159211	4159216	0 %	0 %	50 %	50 %	Non-Coding
19023	NC_014165	CCGG	2	8	4161101	4161108	0 %	0 %	50 %	50 %	Non-Coding
19024	NC_014165	GCCG	2	8	4161135	4161142	0 %	0 %	50 %	50 %	Non-Coding
19025	NC_014165	GACCT	2	10	4161155	4161164	20 %	20 %	20 %	40 %	Non-Coding
19026	NC_014165	GC	4	8	4161202	4161209	0 %	0 %	50 %	50 %	Non-Coding
19027	NC_014165	CT	3	6	4161238	4161243	0 %	50 %	0 %	50 %	Non-Coding
19028	NC_014165	CGG	2	6	4161246	4161251	0 %	0 %	66.67 %	33.33 %	Non-Coding
19029	NC_014165	CG	3	6	4161300	4161305	0 %	0 %	50 %	50 %	Non-Coding
19030	NC_014165	CGG	2	6	4161310	4161315	0 %	0 %	66.67 %	33.33 %	Non-Coding
19031	NC_014165	GCG	2	6	4161979	4161984	0 %	0 %	66.67 %	33.33 %	Non-Coding
19032	NC_014165	GCCC	2	8	4162052	4162059	0 %	0 %	25 %	75 %	Non-Coding
19033	NC_014165	CGC	2	6	4163412	4163417	0 %	0 %	33.33 %	66.67 %	Non-Coding
19034	NC_014165	CGG	2	6	4163427	4163432	0 %	0 %	66.67 %	33.33 %	Non-Coding
19035	NC_014165	GC	3	6	4163437	4163442	0 %	0 %	50 %	50 %	Non-Coding
19036	NC_014165	CGC	3	9	4163463	4163471	0 %	0 %	33.33 %	66.67 %	Non-Coding
19037	NC_014165	GCC	2	6	4163494	4163499	0 %	0 %	33.33 %	66.67 %	Non-Coding
19038	NC_014165	GCCG	2	8	4163516	4163523	0 %	0 %	50 %	50 %	Non-Coding
19039	NC_014165	CGGC	2	8	4163570	4163577	0 %	0 %	50 %	50 %	Non-Coding
19040	NC_014165	CGC	2	6	4163580	4163585	0 %	0 %	33.33 %	66.67 %	Non-Coding
19041	NC_014165	CGGC	2	8	4163591	4163598	0 %	0 %	50 %	50 %	Non-Coding
19042	NC_014165	CGG	2	6	4163614	4163619	0 %	0 %	66.67 %	33.33 %	Non-Coding
19043	NC_014165	CAC	2	6	4163643	4163648	33.33 %	0 %	0 %	66.67 %	Non-Coding
19044	NC_014165	CCG	2	6	4163658	4163663	0 %	0 %	33.33 %	66.67 %	Non-Coding
19045	NC_014165	CG	3	6	4163662	4163667	0 %	0 %	50 %	50 %	Non-Coding
19046	NC_014165	CGGC	2	8	4163672	4163679	0 %	0 %	50 %	50 %	Non-Coding
19047	NC_014165	GCC	2	6	4163736	4163741	0 %	0 %	33.33 %	66.67 %	Non-Coding
19048	NC_014165	CCAC	2	8	4168380	4168387	25 %	0 %	0 %	75 %	Non-Coding
19049	NC_014165	GAAG	2	8	4168404	4168411	50 %	0 %	50 %	0 %	Non-Coding
19050	NC_014165	GGC	2	6	4170226	4170231	0 %	0 %	66.67 %	33.33 %	Non-Coding
19051	NC_014165	CCG	2	6	4173270	4173275	0 %	0 %	33.33 %	66.67 %	Non-Coding
19052	NC_014165	GGCC	2	8	4173344	4173351	0 %	0 %	50 %	50 %	Non-Coding
19053	NC_014165	GCC	2	6	4173407	4173412	0 %	0 %	33.33 %	66.67 %	Non-Coding
19054	NC_014165	CCGGG	2	10	4173433	4173442	0 %	0 %	60 %	40 %	Non-Coding
19055	NC_014165	CGGGC	2	10	4173453	4173462	0 %	0 %	60 %	40 %	Non-Coding
19056	NC_014165	CGGGC	2	10	4173471	4173480	0 %	0 %	60 %	40 %	Non-Coding
19057	NC_014165	GC	3	6	4173488	4173493	0 %	0 %	50 %	50 %	Non-Coding
19058	NC_014165	GGC	2	6	4173613	4173618	0 %	0 %	66.67 %	33.33 %	Non-Coding
19059	NC_014165	CTC	2	6	4173674	4173679	0 %	33.33 %	0 %	66.67 %	Non-Coding
19060	NC_014165	GCCC	2	8	4173681	4173688	0 %	0 %	25 %	75 %	Non-Coding
19061	NC_014165	CGG	2	6	4173756	4173761	0 %	0 %	66.67 %	33.33 %	Non-Coding
19062	NC_014165	CCAC	3	12	4174789	4174800	25 %	0 %	0 %	75 %	Non-Coding
19063	NC_014165	CGG	2	6	4175168	4175173	0 %	0 %	66.67 %	33.33 %	Non-Coding
19064	NC_014165	GC	3	6	4175253	4175258	0 %	0 %	50 %	50 %	Non-Coding
19065	NC_014165	CCGGA	2	10	4175283	4175292	20 %	0 %	40 %	40 %	Non-Coding
19066	NC_014165	CG	4	8	4175315	4175322	0 %	0 %	50 %	50 %	Non-Coding
19067	NC_014165	TCG	2	6	4175969	4175974	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19068	NC_014165	GC	3	6	4175979	4175984	0 %	0 %	50 %	50 %	Non-Coding
19069	NC_014165	CCGGG	2	10	4176028	4176037	0 %	0 %	60 %	40 %	Non-Coding
19070	NC_014165	ACG	3	9	4176042	4176050	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19071	NC_014165	CTG	2	6	4176065	4176070	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19072	NC_014165	GAGC	2	8	4177627	4177634	25 %	0 %	50 %	25 %	Non-Coding
19073	NC_014165	CGTG	2	8	4177644	4177651	0 %	25 %	50 %	25 %	Non-Coding
19074	NC_014165	GT	3	6	4177662	4177667	0 %	50 %	50 %	0 %	Non-Coding
19075	NC_014165	ACCC	2	8	4177681	4177688	25 %	0 %	0 %	75 %	Non-Coding
19076	NC_014165	GAG	2	6	4177700	4177705	33.33 %	0 %	66.67 %	0 %	Non-Coding
19077	NC_014165	CGC	2	6	4178722	4178727	0 %	0 %	33.33 %	66.67 %	Non-Coding
19078	NC_014165	GCA	2	6	4178742	4178747	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19079	NC_014165	CGC	2	6	4178938	4178943	0 %	0 %	33.33 %	66.67 %	Non-Coding
19080	NC_014165	GGT	2	6	4178965	4178970	0 %	33.33 %	66.67 %	0 %	Non-Coding
19081	NC_014165	TGG	2	6	4179101	4179106	0 %	33.33 %	66.67 %	0 %	Non-Coding
19082	NC_014165	GAT	3	9	4179128	4179136	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19083	NC_014165	GCC	2	6	4179319	4179324	0 %	0 %	33.33 %	66.67 %	Non-Coding
19084	NC_014165	ACCC	2	8	4179354	4179361	25 %	0 %	0 %	75 %	Non-Coding
19085	NC_014165	CGG	2	6	4181109	4181114	0 %	0 %	66.67 %	33.33 %	Non-Coding
19086	NC_014165	GGC	2	6	4181118	4181123	0 %	0 %	66.67 %	33.33 %	Non-Coding
19087	NC_014165	GAG	2	6	4181801	4181806	33.33 %	0 %	66.67 %	0 %	Non-Coding
19088	NC_014165	GAGGAT	2	12	4181861	4181872	33.33 %	16.67 %	50 %	0 %	Non-Coding
19089	NC_014165	CTT	3	9	4181926	4181934	0 %	66.67 %	0 %	33.33 %	Non-Coding
19090	NC_014165	ACG	2	6	4181951	4181956	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19091	NC_014165	GGC	2	6	4182004	4182009	0 %	0 %	66.67 %	33.33 %	Non-Coding
19092	NC_014165	AGC	2	6	4182014	4182019	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19093	NC_014165	GCC	2	6	4182020	4182025	0 %	0 %	33.33 %	66.67 %	Non-Coding
19094	NC_014165	TCC	2	6	4182043	4182048	0 %	33.33 %	0 %	66.67 %	Non-Coding
19095	NC_014165	GGCGAG	2	12	4182049	4182060	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
19096	NC_014165	GCGCC	2	10	4182077	4182086	0 %	0 %	40 %	60 %	Non-Coding
19097	NC_014165	CCG	2	6	4182118	4182123	0 %	0 %	33.33 %	66.67 %	Non-Coding
19098	NC_014165	CTA	2	6	4182197	4182202	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19099	NC_014165	CGT	2	6	4182244	4182249	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19100	NC_014165	GCT	2	6	4182295	4182300	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19101	NC_014165	CTG	2	6	4182381	4182386	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19102	NC_014165	GCT	2	6	4182395	4182400	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19103	NC_014165	CGGC	2	8	4182484	4182491	0 %	0 %	50 %	50 %	Non-Coding
19104	NC_014165	CAC	2	6	4182504	4182509	33.33 %	0 %	0 %	66.67 %	Non-Coding
19105	NC_014165	GGT	2	6	4182558	4182563	0 %	33.33 %	66.67 %	0 %	Non-Coding
19106	NC_014165	ACC	2	6	4182636	4182641	33.33 %	0 %	0 %	66.67 %	Non-Coding
19107	NC_014165	CCG	2	6	4182690	4182695	0 %	0 %	33.33 %	66.67 %	Non-Coding
19108	NC_014165	GC	3	6	4182723	4182728	0 %	0 %	50 %	50 %	Non-Coding
19109	NC_014165	CGC	2	6	4182815	4182820	0 %	0 %	33.33 %	66.67 %	Non-Coding
19110	NC_014165	GCT	2	6	4182843	4182848	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19111	NC_014165	TCG	2	6	4182874	4182879	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19112	NC_014165	GGT	2	6	4182886	4182891	0 %	33.33 %	66.67 %	0 %	Non-Coding
19113	NC_014165	CG	3	6	4182912	4182917	0 %	0 %	50 %	50 %	Non-Coding
19114	NC_014165	GCC	2	6	4183089	4183094	0 %	0 %	33.33 %	66.67 %	Non-Coding
19115	NC_014165	GC	3	6	4183102	4183107	0 %	0 %	50 %	50 %	Non-Coding
19116	NC_014165	ATGGC	2	10	4183149	4183158	20 %	20 %	40 %	20 %	Non-Coding
19117	NC_014165	CGGC	2	8	4183225	4183232	0 %	0 %	50 %	50 %	Non-Coding
19118	NC_014165	GGC	2	6	4183236	4183241	0 %	0 %	66.67 %	33.33 %	Non-Coding
19119	NC_014165	TGG	2	6	4183272	4183277	0 %	33.33 %	66.67 %	0 %	Non-Coding
19120	NC_014165	GGT	2	6	4183310	4183315	0 %	33.33 %	66.67 %	0 %	Non-Coding
19121	NC_014165	TCG	2	6	4183350	4183355	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19122	NC_014165	GCC	2	6	4183402	4183407	0 %	0 %	33.33 %	66.67 %	Non-Coding
19123	NC_014165	GTC	2	6	4183440	4183445	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19124	NC_014165	TCG	2	6	4183484	4183489	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19125	NC_014165	GCT	2	6	4184478	4184483	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19126	NC_014165	CAG	2	6	4184549	4184554	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19127	NC_014165	CG	3	6	4184581	4184586	0 %	0 %	50 %	50 %	Non-Coding
19128	NC_014165	CCG	2	6	4184613	4184618	0 %	0 %	33.33 %	66.67 %	Non-Coding
19129	NC_014165	CGC	2	6	4184700	4184705	0 %	0 %	33.33 %	66.67 %	Non-Coding
19130	NC_014165	GGCC	2	8	4185775	4185782	0 %	0 %	50 %	50 %	Non-Coding
19131	NC_014165	CAC	2	6	4186546	4186551	33.33 %	0 %	0 %	66.67 %	Non-Coding
19132	NC_014165	GAGC	2	8	4186667	4186674	25 %	0 %	50 %	25 %	Non-Coding
19133	NC_014165	CGGTGC	2	12	4186712	4186723	0 %	16.67 %	50 %	33.33 %	Non-Coding
19134	NC_014165	CGA	2	6	4187229	4187234	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19135	NC_014165	CCAGA	2	10	4187246	4187255	40 %	0 %	20 %	40 %	Non-Coding
19136	NC_014165	GCC	2	6	4187295	4187300	0 %	0 %	33.33 %	66.67 %	Non-Coding
19137	NC_014165	CGG	2	6	4187316	4187321	0 %	0 %	66.67 %	33.33 %	Non-Coding
19138	NC_014165	CCTT	2	8	4189517	4189524	0 %	50 %	0 %	50 %	Non-Coding
19139	NC_014165	GGT	2	6	4189533	4189538	0 %	33.33 %	66.67 %	0 %	Non-Coding
19140	NC_014165	GCC	3	9	4189541	4189549	0 %	0 %	33.33 %	66.67 %	Non-Coding
19141	NC_014165	CGG	2	6	4189557	4189562	0 %	0 %	66.67 %	33.33 %	Non-Coding
19142	NC_014165	CGGG	2	8	4189754	4189761	0 %	0 %	75 %	25 %	Non-Coding
19143	NC_014165	CTC	2	6	4189765	4189770	0 %	33.33 %	0 %	66.67 %	Non-Coding
19144	NC_014165	GGC	2	6	4189783	4189788	0 %	0 %	66.67 %	33.33 %	Non-Coding
19145	NC_014165	TTC	2	6	4189790	4189795	0 %	66.67 %	0 %	33.33 %	Non-Coding
19146	NC_014165	CGC	2	6	4189855	4189860	0 %	0 %	33.33 %	66.67 %	Non-Coding
19147	NC_014165	GA	3	6	4189900	4189905	50 %	0 %	50 %	0 %	Non-Coding
19148	NC_014165	G	6	6	4189942	4189947	0 %	0 %	100 %	0 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.