MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Thermoplasma acidophilum DSM 1728 chromosome

Total Repeats: 4125

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
4001	NC_002578	TTC	2	6	1531664	1531669	0 %	66.67 %	0 %	33.33 %	Non-Coding
4002	NC_002578	CAC	2	6	1531763	1531768	33.33 %	0 %	0 %	66.67 %	Non-Coding
4003	NC_002578	ACG	2	6	1531875	1531880	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4004	NC_002578	CTT	2	6	1531951	1531956	0 %	66.67 %	0 %	33.33 %	Non-Coding
4005	NC_002578	AGA	2	6	1531960	1531965	66.67 %	0 %	33.33 %	0 %	Non-Coding
4006	NC_002578	AGG	2	6	1531979	1531984	33.33 %	0 %	66.67 %	0 %	Non-Coding
4007	NC_002578	CTT	2	6	1532017	1532022	0 %	66.67 %	0 %	33.33 %	Non-Coding
4008	NC_002578	TCC	2	6	1532095	1532100	0 %	33.33 %	0 %	66.67 %	Non-Coding
4009	NC_002578	CTT	2	6	1532233	1532238	0 %	66.67 %	0 %	33.33 %	Non-Coding
4010	NC_002578	TC	3	6	1532297	1532302	0 %	50 %	0 %	50 %	Non-Coding
4011	NC_002578	TCA	2	6	1532311	1532316	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4012	NC_002578	AAT	2	6	1532429	1532434	66.67 %	33.33 %	0 %	0 %	Non-Coding
4013	NC_002578	AT	3	6	1532464	1532469	50 %	50 %	0 %	0 %	Non-Coding
4014	NC_002578	TTAA	2	8	1532471	1532478	50 %	50 %	0 %	0 %	Non-Coding
4015	NC_002578	A	6	6	1532499	1532504	100 %	0 %	0 %	0 %	Non-Coding
4016	NC_002578	TA	3	6	1533540	1533545	50 %	50 %	0 %	0 %	Non-Coding
4017	NC_002578	CAA	2	6	1533560	1533565	66.67 %	0 %	0 %	33.33 %	Non-Coding
4018	NC_002578	GTG	2	6	1533786	1533791	0 %	33.33 %	66.67 %	0 %	Non-Coding
4019	NC_002578	T	6	6	1534291	1534296	0 %	100 %	0 %	0 %	Non-Coding
4020	NC_002578	CGG	2	6	1534360	1534365	0 %	0 %	66.67 %	33.33 %	Non-Coding
4021	NC_002578	TAT	2	6	1534430	1534435	33.33 %	66.67 %	0 %	0 %	Non-Coding
4022	NC_002578	TTA	2	6	1534575	1534580	33.33 %	66.67 %	0 %	0 %	Non-Coding
4023	NC_002578	TTA	2	6	1534582	1534587	33.33 %	66.67 %	0 %	0 %	Non-Coding
4024	NC_002578	TAA	2	6	1536972	1536977	66.67 %	33.33 %	0 %	0 %	Non-Coding
4025	NC_002578	ATA	2	6	1537008	1537013	66.67 %	33.33 %	0 %	0 %	Non-Coding
4026	NC_002578	AT	3	6	1537060	1537065	50 %	50 %	0 %	0 %	Non-Coding
4027	NC_002578	ATAA	2	8	1537095	1537102	75 %	25 %	0 %	0 %	Non-Coding
4028	NC_002578	ATC	2	6	1537827	1537832	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4029	NC_002578	AT	3	6	1537874	1537879	50 %	50 %	0 %	0 %	Non-Coding
4030	NC_002578	GAT	2	6	1537895	1537900	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4031	NC_002578	ATCAGG	2	12	1539308	1539319	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
4032	NC_002578	CAAGCA	2	12	1539327	1539338	50 %	0 %	16.67 %	33.33 %	Non-Coding
4033	NC_002578	TTA	2	6	1540282	1540287	33.33 %	66.67 %	0 %	0 %	Non-Coding
4034	NC_002578	AT	3	6	1540297	1540302	50 %	50 %	0 %	0 %	Non-Coding
4035	NC_002578	TTC	2	6	1541432	1541437	0 %	66.67 %	0 %	33.33 %	Non-Coding
4036	NC_002578	TCAT	2	8	1541478	1541485	25 %	50 %	0 %	25 %	Non-Coding
4037	NC_002578	AT	3	6	1544709	1544714	50 %	50 %	0 %	0 %	Non-Coding
4038	NC_002578	AT	3	6	1544729	1544734	50 %	50 %	0 %	0 %	Non-Coding
4039	NC_002578	TA	3	6	1544767	1544772	50 %	50 %	0 %	0 %	Non-Coding
4040	NC_002578	TA	3	6	1544815	1544820	50 %	50 %	0 %	0 %	Non-Coding
4041	NC_002578	GCC	2	6	1551148	1551153	0 %	0 %	33.33 %	66.67 %	Non-Coding
4042	NC_002578	TGA	2	6	1551274	1551279	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4043	NC_002578	ATC	2	6	1551748	1551753	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4044	NC_002578	TCT	2	6	1551769	1551774	0 %	66.67 %	0 %	33.33 %	Non-Coding
4045	NC_002578	CTT	3	9	1551863	1551871	0 %	66.67 %	0 %	33.33 %	Non-Coding
4046	NC_002578	TC	3	6	1551882	1551887	0 %	50 %	0 %	50 %	Non-Coding
4047	NC_002578	CA	3	6	1551905	1551910	50 %	0 %	0 %	50 %	Non-Coding
4048	NC_002578	GATACC	2	12	1551932	1551943	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
4049	NC_002578	T	7	7	1551960	1551966	0 %	100 %	0 %	0 %	Non-Coding
4050	NC_002578	AT	3	6	1551967	1551972	50 %	50 %	0 %	0 %	Non-Coding
4051	NC_002578	ATT	2	6	1552002	1552007	33.33 %	66.67 %	0 %	0 %	Non-Coding
4052	NC_002578	TTC	2	6	1552012	1552017	0 %	66.67 %	0 %	33.33 %	Non-Coding
4053	NC_002578	GAA	2	6	1552048	1552053	66.67 %	0 %	33.33 %	0 %	Non-Coding
4054	NC_002578	AATT	2	8	1552104	1552111	50 %	50 %	0 %	0 %	Non-Coding
4055	NC_002578	AGG	2	6	1556347	1556352	33.33 %	0 %	66.67 %	0 %	Non-Coding
4056	NC_002578	CA	3	6	1556423	1556428	50 %	0 %	0 %	50 %	Non-Coding
4057	NC_002578	TAT	2	6	1556454	1556459	33.33 %	66.67 %	0 %	0 %	Non-Coding
4058	NC_002578	GGA	2	6	1556483	1556488	33.33 %	0 %	66.67 %	0 %	Non-Coding
4059	NC_002578	AGA	2	6	1556534	1556539	66.67 %	0 %	33.33 %	0 %	Non-Coding
4060	NC_002578	GAA	2	6	1556568	1556573	66.67 %	0 %	33.33 %	0 %	Non-Coding
4061	NC_002578	CTTA	2	8	1556590	1556597	25 %	50 %	0 %	25 %	Non-Coding
4062	NC_002578	T	6	6	1556621	1556626	0 %	100 %	0 %	0 %	Non-Coding
4063	NC_002578	GGAA	2	8	1556627	1556634	50 %	0 %	50 %	0 %	Non-Coding
4064	NC_002578	TA	3	6	1556651	1556656	50 %	50 %	0 %	0 %	Non-Coding
4065	NC_002578	CCA	2	6	1556766	1556771	33.33 %	0 %	0 %	66.67 %	Non-Coding
4066	NC_002578	TGG	2	6	1556836	1556841	0 %	33.33 %	66.67 %	0 %	Non-Coding
4067	NC_002578	AAG	2	6	1556846	1556851	66.67 %	0 %	33.33 %	0 %	Non-Coding
4068	NC_002578	CCTC	2	8	1556862	1556869	0 %	25 %	0 %	75 %	Non-Coding
4069	NC_002578	AT	3	6	1556872	1556877	50 %	50 %	0 %	0 %	Non-Coding
4070	NC_002578	AATG	2	8	1556888	1556895	50 %	25 %	25 %	0 %	Non-Coding
4071	NC_002578	ATA	2	6	1556910	1556915	66.67 %	33.33 %	0 %	0 %	Non-Coding
4072	NC_002578	CTA	2	6	1556989	1556994	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4073	NC_002578	TAT	2	6	1557027	1557032	33.33 %	66.67 %	0 %	0 %	Non-Coding
4074	NC_002578	AAT	2	6	1557137	1557142	66.67 %	33.33 %	0 %	0 %	Non-Coding
4075	NC_002578	CTT	2	6	1557156	1557161	0 %	66.67 %	0 %	33.33 %	Non-Coding
4076	NC_002578	GAA	2	6	1557321	1557326	66.67 %	0 %	33.33 %	0 %	Non-Coding
4077	NC_002578	GA	3	6	1557440	1557445	50 %	0 %	50 %	0 %	Non-Coding
4078	NC_002578	TGC	2	6	1557481	1557486	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
4079	NC_002578	TAGA	3	12	1557501	1557512	50 %	25 %	25 %	0 %	Non-Coding
4080	NC_002578	GAA	2	6	1557529	1557534	66.67 %	0 %	33.33 %	0 %	Non-Coding
4081	NC_002578	ATG	2	6	1557545	1557550	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4082	NC_002578	GAA	2	6	1557586	1557591	66.67 %	0 %	33.33 %	0 %	Non-Coding
4083	NC_002578	AAAT	2	8	1557624	1557631	75 %	25 %	0 %	0 %	Non-Coding
4084	NC_002578	TA	3	6	1557663	1557668	50 %	50 %	0 %	0 %	Non-Coding
4085	NC_002578	TAA	2	6	1557673	1557678	66.67 %	33.33 %	0 %	0 %	Non-Coding
4086	NC_002578	GAA	2	6	1557684	1557689	66.67 %	0 %	33.33 %	0 %	Non-Coding
4087	NC_002578	AATA	2	8	1557713	1557720	75 %	25 %	0 %	0 %	Non-Coding
4088	NC_002578	T	6	6	1557756	1557761	0 %	100 %	0 %	0 %	Non-Coding
4089	NC_002578	A	6	6	1557837	1557842	100 %	0 %	0 %	0 %	Non-Coding
4090	NC_002578	GCTG	2	8	1557881	1557888	0 %	25 %	50 %	25 %	Non-Coding
4091	NC_002578	AAG	2	6	1557892	1557897	66.67 %	0 %	33.33 %	0 %	Non-Coding
4092	NC_002578	AGA	2	6	1557927	1557932	66.67 %	0 %	33.33 %	0 %	Non-Coding
4093	NC_002578	TTC	2	6	1557972	1557977	0 %	66.67 %	0 %	33.33 %	Non-Coding
4094	NC_002578	GAT	2	6	1557996	1558001	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4095	NC_002578	GGAAA	2	10	1558331	1558340	60 %	0 %	40 %	0 %	Non-Coding
4096	NC_002578	GAG	2	6	1558341	1558346	33.33 %	0 %	66.67 %	0 %	Non-Coding
4097	NC_002578	A	6	6	1558394	1558399	100 %	0 %	0 %	0 %	Non-Coding
4098	NC_002578	GATA	2	8	1558451	1558458	50 %	25 %	25 %	0 %	Non-Coding
4099	NC_002578	ATA	2	6	1558498	1558503	66.67 %	33.33 %	0 %	0 %	Non-Coding
4100	NC_002578	ACA	2	6	1558524	1558529	66.67 %	0 %	0 %	33.33 %	Non-Coding
4101	NC_002578	ATT	2	6	1558610	1558615	33.33 %	66.67 %	0 %	0 %	Non-Coding
4102	NC_002578	CAT	2	6	1558646	1558651	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4103	NC_002578	CTAAA	2	10	1560275	1560284	60 %	20 %	0 %	20 %	Non-Coding
4104	NC_002578	AAATA	2	10	1560351	1560360	80 %	20 %	0 %	0 %	Non-Coding
4105	NC_002578	T	6	6	1561169	1561174	0 %	100 %	0 %	0 %	Non-Coding
4106	NC_002578	AGC	2	6	1561232	1561237	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4107	NC_002578	AGT	2	6	1561238	1561243	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4108	NC_002578	TGA	2	6	1561244	1561249	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4109	NC_002578	AAT	2	6	1561254	1561259	66.67 %	33.33 %	0 %	0 %	Non-Coding
4110	NC_002578	ATA	2	6	1561583	1561588	66.67 %	33.33 %	0 %	0 %	Non-Coding
4111	NC_002578	AT	3	6	1563185	1563190	50 %	50 %	0 %	0 %	Non-Coding
4112	NC_002578	ATT	2	6	1563202	1563207	33.33 %	66.67 %	0 %	0 %	Non-Coding
4113	NC_002578	TA	3	6	1563228	1563233	50 %	50 %	0 %	0 %	Non-Coding
4114	NC_002578	TAT	2	6	1563235	1563240	33.33 %	66.67 %	0 %	0 %	Non-Coding
4115	NC_002578	GAT	2	6	1563257	1563262	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4116	NC_002578	A	6	6	1563302	1563307	100 %	0 %	0 %	0 %	Non-Coding
4117	NC_002578	T	6	6	1563316	1563321	0 %	100 %	0 %	0 %	Non-Coding
4118	NC_002578	AATT	2	8	1563327	1563334	50 %	50 %	0 %	0 %	Non-Coding
4119	NC_002578	GCG	2	6	1563362	1563367	0 %	0 %	66.67 %	33.33 %	Non-Coding
4120	NC_002578	TAA	2	6	1564724	1564729	66.67 %	33.33 %	0 %	0 %	Non-Coding
4121	NC_002578	AAT	2	6	1564742	1564747	66.67 %	33.33 %	0 %	0 %	Non-Coding
4122	NC_002578	TTTA	2	8	1564765	1564772	25 %	75 %	0 %	0 %	Non-Coding
4123	NC_002578	T	6	6	1564803	1564808	0 %	100 %	0 %	0 %	Non-Coding
4124	NC_002578	AAT	2	6	1564827	1564832	66.67 %	33.33 %	0 %	0 %	Non-Coding
4125	NC_002578	TA	3	6	1564866	1564871	50 %	50 %	0 %	0 %	Non-Coding

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