MICAS: Microsatellite Analysis Server 3.0

All Coding Repeats of Thermoplasma acidophilum DSM 1728 chromosome

Total Repeats: 25044

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
25001	NC_002578	CAT	2	6	1562165	1562170	33.33 %	33.33 %	0 %	33.33 %	16082632
25002	NC_002578	AAC	2	6	1562178	1562183	66.67 %	0 %	0 %	33.33 %	16082632
25003	NC_002578	CTGT	2	8	1562225	1562232	0 %	50 %	25 %	25 %	16082632
25004	NC_002578	CCA	2	6	1562246	1562251	33.33 %	0 %	0 %	66.67 %	16082632
25005	NC_002578	ATCC	2	8	1562276	1562283	25 %	25 %	0 %	50 %	16082632
25006	NC_002578	TAT	2	6	1562319	1562324	33.33 %	66.67 %	0 %	0 %	16082632
25007	NC_002578	GCT	2	6	1562353	1562358	0 %	33.33 %	33.33 %	33.33 %	16082632
25008	NC_002578	GCA	2	6	1562393	1562398	33.33 %	0 %	33.33 %	33.33 %	16082632
25009	NC_002578	CA	3	6	1562410	1562415	50 %	0 %	0 %	50 %	16082632
25010	NC_002578	TGT	3	9	1562645	1562653	0 %	66.67 %	33.33 %	0 %	16082632
25011	NC_002578	GGA	2	6	1562654	1562659	33.33 %	0 %	66.67 %	0 %	16082632
25012	NC_002578	GAA	2	6	1562691	1562696	66.67 %	0 %	33.33 %	0 %	16082632
25013	NC_002578	TCG	2	6	1562719	1562724	0 %	33.33 %	33.33 %	33.33 %	16082632
25014	NC_002578	CAC	2	6	1562790	1562795	33.33 %	0 %	0 %	66.67 %	16082632
25015	NC_002578	CAT	2	6	1562976	1562981	33.33 %	33.33 %	0 %	33.33 %	16082632
25016	NC_002578	T	6	6	1563045	1563050	0 %	100 %	0 %	0 %	16082632
25017	NC_002578	TCC	2	6	1563116	1563121	0 %	33.33 %	0 %	66.67 %	16082632
25018	NC_002578	TTC	2	6	1563127	1563132	0 %	66.67 %	0 %	33.33 %	16082632
25019	NC_002578	CATGA	2	10	1563162	1563171	40 %	20 %	20 %	20 %	16082632
25020	NC_002578	ATCAG	2	10	1563369	1563378	40 %	20 %	20 %	20 %	16082467
25021	NC_002578	TATG	2	8	1563382	1563389	25 %	50 %	25 %	0 %	16082467
25022	NC_002578	TTG	2	6	1563549	1563554	0 %	66.67 %	33.33 %	0 %	16082467
25023	NC_002578	CCT	2	6	1563555	1563560	0 %	33.33 %	0 %	66.67 %	16082467
25024	NC_002578	GCA	2	6	1563615	1563620	33.33 %	0 %	33.33 %	33.33 %	16082467
25025	NC_002578	TAT	2	6	1563634	1563639	33.33 %	66.67 %	0 %	0 %	16082467
25026	NC_002578	CCG	2	6	1563677	1563682	0 %	0 %	33.33 %	66.67 %	16082467
25027	NC_002578	CT	3	6	1563726	1563731	0 %	50 %	0 %	50 %	16082467
25028	NC_002578	TTC	2	6	1563766	1563771	0 %	66.67 %	0 %	33.33 %	16082467
25029	NC_002578	ATG	2	6	1563794	1563799	33.33 %	33.33 %	33.33 %	0 %	16082467
25030	NC_002578	TCA	2	6	1563800	1563805	33.33 %	33.33 %	0 %	33.33 %	16082467
25031	NC_002578	CTC	2	6	1563829	1563834	0 %	33.33 %	0 %	66.67 %	16082467
25032	NC_002578	TGC	2	6	1563835	1563840	0 %	33.33 %	33.33 %	33.33 %	16082467
25033	NC_002578	TGG	2	6	1563872	1563877	0 %	33.33 %	66.67 %	0 %	16082467
25034	NC_002578	GC	3	6	1563902	1563907	0 %	0 %	50 %	50 %	16082467
25035	NC_002578	CT	3	6	1564009	1564014	0 %	50 %	0 %	50 %	16082467
25036	NC_002578	CCG	2	6	1564034	1564039	0 %	0 %	33.33 %	66.67 %	16082467
25037	NC_002578	AGAC	2	8	1564137	1564144	50 %	0 %	25 %	25 %	16082467
25038	NC_002578	TAT	2	6	1564177	1564182	33.33 %	66.67 %	0 %	0 %	16082467
25039	NC_002578	GCA	2	6	1564280	1564285	33.33 %	0 %	33.33 %	33.33 %	16082467
25040	NC_002578	ATA	2	6	1564459	1564464	66.67 %	33.33 %	0 %	0 %	16082467
25041	NC_002578	CTCGA	2	10	1564508	1564517	20 %	20 %	20 %	40 %	16082467
25042	NC_002578	CCT	2	6	1564533	1564538	0 %	33.33 %	0 %	66.67 %	16082467
25043	NC_002578	TCA	2	6	1564551	1564556	33.33 %	33.33 %	0 %	33.33 %	16082467
25044	NC_002578	TC	3	6	1564617	1564622	0 %	50 %	0 %	50 %	16082467

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.