All Repeats of Thermovirga lienii DSM 17291 plasmid pTLIE01
Total Repeats: 624
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
501 | NC_016149 | CTG | 2 | 6 | 25393 | 25398 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418845 |
502 | NC_016149 | CGC | 2 | 6 | 25430 | 25435 | 0 % | 0 % | 33.33 % | 66.67 % | 357418845 |
503 | NC_016149 | AGC | 2 | 6 | 25436 | 25441 | 33.33 % | 0 % | 33.33 % | 33.33 % | 357418845 |
504 | NC_016149 | TGC | 2 | 6 | 25463 | 25468 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418845 |
505 | NC_016149 | CTC | 2 | 6 | 25490 | 25495 | 0 % | 33.33 % | 0 % | 66.67 % | 357418845 |
506 | NC_016149 | CAAAAA | 2 | 12 | 25526 | 25537 | 83.33 % | 0 % | 0 % | 16.67 % | 357418845 |
507 | NC_016149 | ATA | 2 | 6 | 25607 | 25612 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
508 | NC_016149 | A | 6 | 6 | 25655 | 25660 | 100 % | 0 % | 0 % | 0 % | Non-Coding |
509 | NC_016149 | AAT | 2 | 6 | 25703 | 25708 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
510 | NC_016149 | TTC | 2 | 6 | 25711 | 25716 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
511 | NC_016149 | TTG | 2 | 6 | 25753 | 25758 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
512 | NC_016149 | A | 7 | 7 | 25798 | 25804 | 100 % | 0 % | 0 % | 0 % | Non-Coding |
513 | NC_016149 | TAT | 2 | 6 | 25894 | 25899 | 33.33 % | 66.67 % | 0 % | 0 % | 357418846 |
514 | NC_016149 | GAT | 2 | 6 | 25914 | 25919 | 33.33 % | 33.33 % | 33.33 % | 0 % | 357418846 |
515 | NC_016149 | AGG | 2 | 6 | 25959 | 25964 | 33.33 % | 0 % | 66.67 % | 0 % | 357418846 |
516 | NC_016149 | TGA | 2 | 6 | 25973 | 25978 | 33.33 % | 33.33 % | 33.33 % | 0 % | 357418846 |
517 | NC_016149 | GTG | 2 | 6 | 26026 | 26031 | 0 % | 33.33 % | 66.67 % | 0 % | 357418846 |
518 | NC_016149 | CGG | 2 | 6 | 26048 | 26053 | 0 % | 0 % | 66.67 % | 33.33 % | 357418846 |
519 | NC_016149 | CAC | 2 | 6 | 26064 | 26069 | 33.33 % | 0 % | 0 % | 66.67 % | 357418846 |
520 | NC_016149 | TCCCT | 2 | 10 | 26082 | 26091 | 0 % | 40 % | 0 % | 60 % | 357418846 |
521 | NC_016149 | CT | 3 | 6 | 26162 | 26167 | 0 % | 50 % | 0 % | 50 % | 357418846 |
522 | NC_016149 | AGG | 2 | 6 | 26185 | 26190 | 33.33 % | 0 % | 66.67 % | 0 % | 357418846 |
523 | NC_016149 | TTG | 2 | 6 | 26284 | 26289 | 0 % | 66.67 % | 33.33 % | 0 % | 357418846 |
524 | NC_016149 | CCA | 2 | 6 | 26317 | 26322 | 33.33 % | 0 % | 0 % | 66.67 % | 357418846 |
525 | NC_016149 | AGG | 2 | 6 | 26428 | 26433 | 33.33 % | 0 % | 66.67 % | 0 % | 357418846 |
526 | NC_016149 | GTT | 2 | 6 | 26436 | 26441 | 0 % | 66.67 % | 33.33 % | 0 % | 357418846 |
527 | NC_016149 | TCG | 2 | 6 | 26572 | 26577 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418846 |
528 | NC_016149 | ATC | 2 | 6 | 26616 | 26621 | 33.33 % | 33.33 % | 0 % | 33.33 % | 357418846 |
529 | NC_016149 | GAT | 2 | 6 | 26649 | 26654 | 33.33 % | 33.33 % | 33.33 % | 0 % | 357418846 |
530 | NC_016149 | GGT | 3 | 9 | 26655 | 26663 | 0 % | 33.33 % | 66.67 % | 0 % | 357418846 |
531 | NC_016149 | GAA | 2 | 6 | 26792 | 26797 | 66.67 % | 0 % | 33.33 % | 0 % | 357418846 |
532 | NC_016149 | CTT | 2 | 6 | 26826 | 26831 | 0 % | 66.67 % | 0 % | 33.33 % | 357418846 |
533 | NC_016149 | GAA | 2 | 6 | 26856 | 26861 | 66.67 % | 0 % | 33.33 % | 0 % | 357418846 |
534 | NC_016149 | GAT | 2 | 6 | 26910 | 26915 | 33.33 % | 33.33 % | 33.33 % | 0 % | 357418846 |
535 | NC_016149 | GAT | 2 | 6 | 27035 | 27040 | 33.33 % | 33.33 % | 33.33 % | 0 % | 357418846 |
536 | NC_016149 | TCCATT | 2 | 12 | 27064 | 27075 | 16.67 % | 50 % | 0 % | 33.33 % | 357418846 |
537 | NC_016149 | CTT | 2 | 6 | 27115 | 27120 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
538 | NC_016149 | T | 6 | 6 | 27174 | 27179 | 0 % | 100 % | 0 % | 0 % | Non-Coding |
539 | NC_016149 | TGT | 2 | 6 | 27304 | 27309 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
540 | NC_016149 | TAA | 2 | 6 | 27344 | 27349 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
541 | NC_016149 | ATAC | 2 | 8 | 27424 | 27431 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
542 | NC_016149 | T | 6 | 6 | 27484 | 27489 | 0 % | 100 % | 0 % | 0 % | 357418847 |
543 | NC_016149 | TCG | 2 | 6 | 27499 | 27504 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418847 |
544 | NC_016149 | T | 6 | 6 | 27561 | 27566 | 0 % | 100 % | 0 % | 0 % | 357418847 |
545 | NC_016149 | CCTTT | 2 | 10 | 27595 | 27604 | 0 % | 60 % | 0 % | 40 % | 357418847 |
546 | NC_016149 | AAGC | 2 | 8 | 27629 | 27636 | 50 % | 0 % | 25 % | 25 % | 357418847 |
547 | NC_016149 | ATA | 2 | 6 | 27639 | 27644 | 66.67 % | 33.33 % | 0 % | 0 % | 357418847 |
548 | NC_016149 | TGG | 2 | 6 | 27664 | 27669 | 0 % | 33.33 % | 66.67 % | 0 % | 357418847 |
549 | NC_016149 | AAG | 2 | 6 | 27693 | 27698 | 66.67 % | 0 % | 33.33 % | 0 % | 357418847 |
550 | NC_016149 | CT | 3 | 6 | 27735 | 27740 | 0 % | 50 % | 0 % | 50 % | 357418847 |
551 | NC_016149 | CTA | 2 | 6 | 27767 | 27772 | 33.33 % | 33.33 % | 0 % | 33.33 % | 357418847 |
552 | NC_016149 | CCTTCC | 2 | 12 | 27782 | 27793 | 0 % | 33.33 % | 0 % | 66.67 % | 357418847 |
553 | NC_016149 | GGA | 2 | 6 | 27819 | 27824 | 33.33 % | 0 % | 66.67 % | 0 % | 357418847 |
554 | NC_016149 | CT | 4 | 8 | 27849 | 27856 | 0 % | 50 % | 0 % | 50 % | 357418847 |
555 | NC_016149 | CTT | 2 | 6 | 27882 | 27887 | 0 % | 66.67 % | 0 % | 33.33 % | 357418847 |
556 | NC_016149 | A | 6 | 6 | 27966 | 27971 | 100 % | 0 % | 0 % | 0 % | 357418847 |
557 | NC_016149 | TCAAAG | 2 | 12 | 27985 | 27996 | 50 % | 16.67 % | 16.67 % | 16.67 % | 357418847 |
558 | NC_016149 | CAG | 2 | 6 | 28093 | 28098 | 33.33 % | 0 % | 33.33 % | 33.33 % | 357418847 |
559 | NC_016149 | TTA | 2 | 6 | 28104 | 28109 | 33.33 % | 66.67 % | 0 % | 0 % | 357418847 |
560 | NC_016149 | CAG | 2 | 6 | 28218 | 28223 | 33.33 % | 0 % | 33.33 % | 33.33 % | 357418847 |
561 | NC_016149 | TCC | 2 | 6 | 28368 | 28373 | 0 % | 33.33 % | 0 % | 66.67 % | 357418847 |
562 | NC_016149 | ACT | 2 | 6 | 28449 | 28454 | 33.33 % | 33.33 % | 0 % | 33.33 % | 357418847 |
563 | NC_016149 | T | 6 | 6 | 28543 | 28548 | 0 % | 100 % | 0 % | 0 % | 357418848 |
564 | NC_016149 | CAC | 2 | 6 | 28590 | 28595 | 33.33 % | 0 % | 0 % | 66.67 % | 357418848 |
565 | NC_016149 | CAG | 2 | 6 | 28613 | 28618 | 33.33 % | 0 % | 33.33 % | 33.33 % | 357418848 |
566 | NC_016149 | ATG | 2 | 6 | 28674 | 28679 | 33.33 % | 33.33 % | 33.33 % | 0 % | 357418848 |
567 | NC_016149 | TAAACC | 2 | 12 | 28701 | 28712 | 50 % | 16.67 % | 0 % | 33.33 % | 357418848 |
568 | NC_016149 | CTG | 2 | 6 | 28724 | 28729 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418848 |
569 | NC_016149 | AT | 3 | 6 | 28734 | 28739 | 50 % | 50 % | 0 % | 0 % | 357418848 |
570 | NC_016149 | CTT | 2 | 6 | 28786 | 28791 | 0 % | 66.67 % | 0 % | 33.33 % | 357418848 |
571 | NC_016149 | T | 6 | 6 | 28790 | 28795 | 0 % | 100 % | 0 % | 0 % | 357418848 |
572 | NC_016149 | TCG | 2 | 6 | 28811 | 28816 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418848 |
573 | NC_016149 | TTA | 2 | 6 | 28863 | 28868 | 33.33 % | 66.67 % | 0 % | 0 % | 357418848 |
574 | NC_016149 | CCG | 2 | 6 | 28869 | 28874 | 0 % | 0 % | 33.33 % | 66.67 % | 357418848 |
575 | NC_016149 | CCG | 2 | 6 | 28897 | 28902 | 0 % | 0 % | 33.33 % | 66.67 % | 357418848 |
576 | NC_016149 | GTTT | 2 | 8 | 28965 | 28972 | 0 % | 75 % | 25 % | 0 % | 357418848 |
577 | NC_016149 | AGA | 2 | 6 | 29039 | 29044 | 66.67 % | 0 % | 33.33 % | 0 % | 357418848 |
578 | NC_016149 | AAT | 2 | 6 | 29050 | 29055 | 66.67 % | 33.33 % | 0 % | 0 % | 357418848 |
579 | NC_016149 | T | 6 | 6 | 29171 | 29176 | 0 % | 100 % | 0 % | 0 % | 357418848 |
580 | NC_016149 | TTA | 2 | 6 | 29193 | 29198 | 33.33 % | 66.67 % | 0 % | 0 % | 357418848 |
581 | NC_016149 | GAG | 2 | 6 | 29216 | 29221 | 33.33 % | 0 % | 66.67 % | 0 % | 357418848 |
582 | NC_016149 | CCA | 2 | 6 | 29292 | 29297 | 33.33 % | 0 % | 0 % | 66.67 % | 357418848 |
583 | NC_016149 | ATC | 2 | 6 | 29306 | 29311 | 33.33 % | 33.33 % | 0 % | 33.33 % | 357418848 |
584 | NC_016149 | TCG | 2 | 6 | 29312 | 29317 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418848 |
585 | NC_016149 | CCA | 2 | 6 | 29420 | 29425 | 33.33 % | 0 % | 0 % | 66.67 % | 357418848 |
586 | NC_016149 | TCC | 2 | 6 | 29462 | 29467 | 0 % | 33.33 % | 0 % | 66.67 % | 357418848 |
587 | NC_016149 | T | 6 | 6 | 29521 | 29526 | 0 % | 100 % | 0 % | 0 % | 357418848 |
588 | NC_016149 | GCC | 2 | 6 | 29649 | 29654 | 0 % | 0 % | 33.33 % | 66.67 % | 357418849 |
589 | NC_016149 | CAT | 2 | 6 | 29681 | 29686 | 33.33 % | 33.33 % | 0 % | 33.33 % | 357418849 |
590 | NC_016149 | TCCC | 2 | 8 | 29728 | 29735 | 0 % | 25 % | 0 % | 75 % | 357418849 |
591 | NC_016149 | TACCTC | 2 | 12 | 29902 | 29913 | 16.67 % | 33.33 % | 0 % | 50 % | 357418850 |
592 | NC_016149 | CTT | 2 | 6 | 29931 | 29936 | 0 % | 66.67 % | 0 % | 33.33 % | 357418850 |
593 | NC_016149 | GTA | 2 | 6 | 29979 | 29984 | 33.33 % | 33.33 % | 33.33 % | 0 % | 357418850 |
594 | NC_016149 | CAT | 2 | 6 | 29991 | 29996 | 33.33 % | 33.33 % | 0 % | 33.33 % | 357418850 |
595 | NC_016149 | ATC | 2 | 6 | 30052 | 30057 | 33.33 % | 33.33 % | 0 % | 33.33 % | 357418850 |
596 | NC_016149 | TCC | 3 | 9 | 30073 | 30081 | 0 % | 33.33 % | 0 % | 66.67 % | 357418850 |
597 | NC_016149 | AG | 3 | 6 | 30159 | 30164 | 50 % | 0 % | 50 % | 0 % | 357418850 |
598 | NC_016149 | CCAA | 2 | 8 | 30168 | 30175 | 50 % | 0 % | 0 % | 50 % | 357418850 |
599 | NC_016149 | GTC | 2 | 6 | 30201 | 30206 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418850 |
600 | NC_016149 | CCA | 2 | 6 | 30251 | 30256 | 33.33 % | 0 % | 0 % | 66.67 % | 357418850 |
601 | NC_016149 | TCC | 2 | 6 | 30378 | 30383 | 0 % | 33.33 % | 0 % | 66.67 % | 357418850 |
602 | NC_016149 | CTT | 2 | 6 | 30453 | 30458 | 0 % | 66.67 % | 0 % | 33.33 % | 357418850 |
603 | NC_016149 | CT | 4 | 8 | 30537 | 30544 | 0 % | 50 % | 0 % | 50 % | 357418850 |
604 | NC_016149 | GTA | 2 | 6 | 30561 | 30566 | 33.33 % | 33.33 % | 33.33 % | 0 % | 357418850 |
605 | NC_016149 | GGGC | 2 | 8 | 30597 | 30604 | 0 % | 0 % | 75 % | 25 % | 357418850 |
606 | NC_016149 | GCC | 3 | 9 | 30655 | 30663 | 0 % | 0 % | 33.33 % | 66.67 % | 357418850 |
607 | NC_016149 | TCG | 2 | 6 | 30700 | 30705 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418850 |
608 | NC_016149 | GGT | 2 | 6 | 30710 | 30715 | 0 % | 33.33 % | 66.67 % | 0 % | 357418850 |
609 | NC_016149 | CTTC | 2 | 8 | 30800 | 30807 | 0 % | 50 % | 0 % | 50 % | 357418850 |
610 | NC_016149 | GGCA | 2 | 8 | 30845 | 30852 | 25 % | 0 % | 50 % | 25 % | 357418850 |
611 | NC_016149 | CCGTA | 2 | 10 | 30989 | 30998 | 20 % | 20 % | 20 % | 40 % | 357418850 |
612 | NC_016149 | GCC | 2 | 6 | 31008 | 31013 | 0 % | 0 % | 33.33 % | 66.67 % | 357418850 |
613 | NC_016149 | TGC | 2 | 6 | 31136 | 31141 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418850 |
614 | NC_016149 | CAG | 2 | 6 | 31196 | 31201 | 33.33 % | 0 % | 33.33 % | 33.33 % | 357418850 |
615 | NC_016149 | GCCG | 2 | 8 | 31221 | 31228 | 0 % | 0 % | 50 % | 50 % | 357418850 |
616 | NC_016149 | GTC | 2 | 6 | 31341 | 31346 | 0 % | 33.33 % | 33.33 % | 33.33 % | 357418850 |
617 | NC_016149 | AT | 3 | 6 | 31357 | 31362 | 50 % | 50 % | 0 % | 0 % | 357418850 |
618 | NC_016149 | TCC | 2 | 6 | 31620 | 31625 | 0 % | 33.33 % | 0 % | 66.67 % | 357418850 |
619 | NC_016149 | TCT | 2 | 6 | 31673 | 31678 | 0 % | 66.67 % | 0 % | 33.33 % | 357418850 |
620 | NC_016149 | AAC | 2 | 6 | 31696 | 31701 | 66.67 % | 0 % | 0 % | 33.33 % | 357418850 |
621 | NC_016149 | TCC | 2 | 6 | 31728 | 31733 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
622 | NC_016149 | TCAA | 2 | 8 | 31736 | 31743 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
623 | NC_016149 | TTC | 2 | 6 | 31751 | 31756 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
624 | NC_016149 | TAA | 2 | 6 | 31825 | 31830 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |