MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Sinorhizobium fredii USDA 257 plasmid pUSDA257

Total Repeats: 49

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_018189	CCG	2	6	12	17	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_018189	GCT	2	6	54	59	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3	NC_018189	CCA	2	6	148	153	33.33 %	0 %	0 %	66.67 %	Non-Coding
4	NC_018189	TGC	2	6	225	230	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_018189	GCG	2	6	234	239	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_018189	GCG	2	6	265	270	0 %	0 %	66.67 %	33.33 %	Non-Coding
7	NC_018189	GCA	3	9	295	303	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8	NC_018189	GAC	2	6	321	326	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9	NC_018189	GCC	2	6	362	367	0 %	0 %	33.33 %	66.67 %	Non-Coding
10	NC_018189	TCG	2	6	468	473	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
11	NC_018189	TGA	2	6	475	480	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12	NC_018189	CCT	2	6	484	489	0 %	33.33 %	0 %	66.67 %	Non-Coding
13	NC_018189	CTG	2	6	542	547	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_018189	GAC	2	6	606	611	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_018189	CTC	2	6	671	676	0 %	33.33 %	0 %	66.67 %	Non-Coding
16	NC_018189	TGC	2	6	708	713	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_018189	GCG	3	9	717	725	0 %	0 %	66.67 %	33.33 %	Non-Coding
18	NC_018189	CGT	2	6	807	812	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19	NC_018189	TGC	2	6	1008	1013	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_018189	TGA	2	6	1042	1047	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_018189	GCG	2	6	1141	1146	0 %	0 %	66.67 %	33.33 %	Non-Coding
22	NC_018189	ACG	2	6	1261	1266	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
23	NC_018189	CAG	2	6	1276	1281	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
24	NC_018189	TGT	3	9	1294	1302	0 %	66.67 %	33.33 %	0 %	Non-Coding
25	NC_018189	CTT	2	6	1358	1363	0 %	66.67 %	0 %	33.33 %	Non-Coding
26	NC_018189	GCT	2	6	1377	1382	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_018189	GAT	2	6	1426	1431	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_018189	CGC	2	6	1496	1501	0 %	0 %	33.33 %	66.67 %	Non-Coding
29	NC_018189	AAG	2	6	1502	1507	66.67 %	0 %	33.33 %	0 %	Non-Coding
30	NC_018189	CGG	2	6	1660	1665	0 %	0 %	66.67 %	33.33 %	Non-Coding
31	NC_018189	TGA	2	6	1675	1680	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
32	NC_018189	GCG	2	6	1774	1779	0 %	0 %	66.67 %	33.33 %	Non-Coding
33	NC_018189	GCG	2	6	1782	1787	0 %	0 %	66.67 %	33.33 %	Non-Coding
34	NC_018189	CCA	2	6	1800	1805	33.33 %	0 %	0 %	66.67 %	Non-Coding
35	NC_018189	CGC	2	6	1850	1855	0 %	0 %	33.33 %	66.67 %	Non-Coding
36	NC_018189	CAA	2	6	1999	2004	66.67 %	0 %	0 %	33.33 %	Non-Coding
37	NC_018189	TTC	2	6	2057	2062	0 %	66.67 %	0 %	33.33 %	Non-Coding
38	NC_018189	TGA	2	6	2119	2124	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_018189	CTC	2	6	2217	2222	0 %	33.33 %	0 %	66.67 %	Non-Coding
40	NC_018189	GCA	2	6	2410	2415	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NC_018189	CTG	2	6	2555	2560	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
42	NC_018189	CTT	2	6	2573	2578	0 %	66.67 %	0 %	33.33 %	Non-Coding
43	NC_018189	CCG	2	6	2599	2604	0 %	0 %	33.33 %	66.67 %	Non-Coding
44	NC_018189	TTG	2	6	2724	2729	0 %	66.67 %	33.33 %	0 %	Non-Coding
45	NC_018189	CCT	2	6	2746	2751	0 %	33.33 %	0 %	66.67 %	Non-Coding
46	NC_018189	GAA	3	9	2944	2952	66.67 %	0 %	33.33 %	0 %	Non-Coding
47	NC_018189	GCC	2	6	2962	2967	0 %	0 %	33.33 %	66.67 %	Non-Coding
48	NC_018189	GAC	2	6	3011	3016	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
49	NC_018189	GAG	2	6	3032	3037	33.33 %	0 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.