MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Sinorhizobium fredii USDA 257 plasmid pUSDA257

Total Repeats: 40

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_018185	GTC	2	6	197	202	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2	NC_018185	GCC	2	6	218	223	0 %	0 %	33.33 %	66.67 %	Non-Coding
3	NC_018185	GCC	2	6	228	233	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_018185	CGC	2	6	251	256	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_018185	GAC	2	6	283	288	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_018185	ACG	2	6	299	304	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_018185	GGC	2	6	319	324	0 %	0 %	66.67 %	33.33 %	Non-Coding
8	NC_018185	CGA	2	6	1479	1484	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9	NC_018185	TGG	2	6	2529	2534	0 %	33.33 %	66.67 %	0 %	Non-Coding
10	NC_018185	AGT	2	6	2545	2550	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
11	NC_018185	CGA	2	6	5008	5013	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_018185	ATC	2	6	5112	5117	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_018185	TGG	2	6	5134	5139	0 %	33.33 %	66.67 %	0 %	Non-Coding
14	NC_018185	AGA	2	6	5164	5169	66.67 %	0 %	33.33 %	0 %	Non-Coding
15	NC_018185	TGC	2	6	5191	5196	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_018185	GGC	2	6	5274	5279	0 %	0 %	66.67 %	33.33 %	Non-Coding
17	NC_018185	GGA	2	6	5302	5307	33.33 %	0 %	66.67 %	0 %	Non-Coding
18	NC_018185	GCC	2	6	5359	5364	0 %	0 %	33.33 %	66.67 %	Non-Coding
19	NC_018185	GCA	2	6	5376	5381	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
20	NC_018185	GCA	2	6	5431	5436	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_018185	TGG	2	6	5458	5463	0 %	33.33 %	66.67 %	0 %	Non-Coding
22	NC_018185	AGA	2	6	5476	5481	66.67 %	0 %	33.33 %	0 %	Non-Coding
23	NC_018185	CCG	2	6	5524	5529	0 %	0 %	33.33 %	66.67 %	Non-Coding
24	NC_018185	CAG	2	6	5570	5575	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
25	NC_018185	TCA	2	6	6377	6382	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_018185	CAC	2	6	6476	6481	33.33 %	0 %	0 %	66.67 %	Non-Coding
27	NC_018185	GCG	2	6	6490	6495	0 %	0 %	66.67 %	33.33 %	Non-Coding
28	NC_018185	CGA	2	6	6518	6523	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
29	NC_018185	CAC	2	6	6627	6632	33.33 %	0 %	0 %	66.67 %	Non-Coding
30	NC_018185	GTT	2	6	6671	6676	0 %	66.67 %	33.33 %	0 %	Non-Coding
31	NC_018185	TGG	2	6	6736	6741	0 %	33.33 %	66.67 %	0 %	Non-Coding
32	NC_018185	TCG	2	6	6931	6936	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
33	NC_018185	GAC	2	6	7027	7032	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
34	NC_018185	CGA	2	6	7042	7047	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_018185	CAA	2	6	7101	7106	66.67 %	0 %	0 %	33.33 %	Non-Coding
36	NC_018185	GGC	2	6	7712	7717	0 %	0 %	66.67 %	33.33 %	Non-Coding
37	NC_018185	TGG	2	6	7779	7784	0 %	33.33 %	66.67 %	0 %	Non-Coding
38	NC_018185	GCG	2	6	7881	7886	0 %	0 %	66.67 %	33.33 %	Non-Coding
39	NC_018185	GAA	2	6	7908	7913	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_018185	CGA	2	6	7977	7982	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.